Genomic map of Mycobacterium phage Emma (MF668270)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF668270
Definition
Mycobacterium phage Emma, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
NUCCORE
Length
56418
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
109
%GC
61.32
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASZ72889.1 MF668270_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4450 5043
ASZ72904.1 MF668270_p22 minor tail protein phrog_2005 minor tail protein tail 1 23413 23667
ASZ72931.1 MF668270_p51 hypothetical protein phrog_1816 unknown function unknown function 1 36232 36408
ASZ72892.1 MF668270_p8 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 6446 6778
ASZ72977.1 MF668270_p102 hypothetical protein phrog_1694 unknown function unknown function 1 52668 52865
ASZ72963.1 MF668270_p87 MPME protein phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 48858 49163
ASZ72925.1 MF668270_p44 integrase phrog_1 integrase integration and excision 1 32666 33784
ASZ72947.1 MF668270_p68 DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 42404 43693
ASZ72902.1 MF668270_p20 minor tail protein phrog_2106 minor tail protein tail 1 21871 23031
ASZ72954.1 MF668270_p76 HTH DNA binding protein phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 45662 46567
ASZ72929.1 MF668270_p48 hypothetical protein phrog_2025 unknown function unknown function 1 35593 35883
ASZ72942.1 MF668270_p63 hypothetical protein phrog_1834 unknown function unknown function 1 40526 40756
ASZ72974.1 MF668270_p99 hypothetical protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 52064 52288
ASZ72945.1 MF668270_p66 AAA ATPase phrog_1366 unknown function unknown function 1 41167 42048
ASZ72899.1 MF668270_p16 minor tail protein phrog_110 minor tail protein tail 1 14857 16566
ASZ72978.1 MF668270_p103 hypothetical protein phrog_1186 unknown function unknown function 1 52862 53275
ASZ72933.1 MF668270_p54 hypothetical protein phrog_3416 unknown function unknown function 1 37254 37994
ASZ72887.1 MF668270_p1 terminase small subunit phrog_226 minor tail protein tail 1 109 564
ASZ72972.1 MF668270_p97 hypothetical protein phrog_2247 unknown function unknown function 1 51053 51316
ASZ72905.1 MF668270_p23 minor tail protein phrog_2012 minor tail protein tail 1 23681 24319
ASZ72906.1 MF668270_p24 minor tail protein phrog_754 minor tail protein tail 1 24316 25299
ASZ72975.1 MF668270_p100 hypothetical protein phrog_1869 unknown function unknown function 1 52285 52452
ASZ72951.1 MF668270_p72 hypothetical protein phrog_2070 unknown function unknown function 1 45010 45171
ASZ72937.1 MF668270_p58 hypothetical protein phrog_658 unknown function unknown function 1 38779 39114
ASZ72916.1 MF668270_p34 holin phrog_443 holin lysis 1 29135 29368
ASZ72930.1 MF668270_p50 hypothetical protein phrog_1840 excisionase integration and excision 1 35972 36232
ASZ72896.1 MF668270_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8576 9127
ASZ72921.1 MF668270_p40 membrane protein phrog_1839 unknown function unknown function 1 31103 31195
ASZ72949.1 MF668270_p70 hypothetical protein phrog_10510 unknown function unknown function 1 44637 44867
ASZ72934.1 MF668270_p55 hypothetical protein phrog_11849 membrane protein moron, auxiliary metabolic gene and host takeover 1 37991 38143
ASZ72995.1 MF668270_p38 hypothetical protein phrog_8186 unknown function unknown function 1 30789 30902
ASZ72913.1 MF668270_p31 hypothetical protein phrog_747 unknown function unknown function 1 26666 26899
ASZ72967.1 MF668270_p91 hypothetical protein phrog_1091 unknown function unknown function 1 49790 49969
ASZ72989.1 MF668270_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8576 9512
ASZ72900.1 MF668270_p18 minor tail protein phrog_346 minor tail protein tail 1 17448 19985
ASZ72907.1 MF668270_p25 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25305 25502
ASZ72994.1 MF668270_p94 hypothetical protein phrog_4126 unknown function unknown function 1 50498 50623
ASZ72971.1 MF668270_p96 hypothetical protein phrog_10123 unknown function unknown function 1 50772 51056
ASZ72984.1 MF668270_p109 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 55950 56276
ASZ72914.1 MF668270_p32 lysin A phrog_700 endolysin lysis 1 26896 28128
ASZ72915.1 MF668270_p33 lysin B phrog_102 endolysin lysis 1 28128 29126
ASZ72924.1 MF668270_p43 hypothetical protein phrog_5130 unknown function unknown function -1 32049 32237
ASZ72970.1 MF668270_p95 hypothetical protein phrog_2278 unknown function unknown function 1 50620 50775
ASZ72985.1 MF668270_p17 minor tail protein phrog_732 minor tail protein tail 1 16603 17451
ASZ72909.1 MF668270_p27 hypothetical protein phrog_932 unknown function unknown function 1 25945 26091
ASZ72941.1 MF668270_p62 hypothetical protein phrog_2078 unknown function unknown function 1 40374 40529
ASZ72891.1 MF668270_p7 head-to-tail connector protein phrog_2377 head-tail adaptor Ad1 connector 1 5883 6449
ASZ72962.1 MF668270_p86 hypothetical protein phrog_647 unknown function unknown function 1 48537 48812
ASZ72973.1 MF668270_p98 hypothetical protein phrog_1467 unknown function unknown function 1 51313 51954
ASZ72912.1 MF668270_p30 hypothetical protein phrog_1172 unknown function unknown function 1 26455 26598
ASZ72922.1 MF668270_p41 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 31244 31756
ASZ72901.1 MF668270_p19 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 19982 21868
ASZ72893.1 MF668270_p9 head-to-tail connector protein phrog_1929 head-tail connector protein connector 1 6781 7110
ASZ72986.1 MF668270_p52 hypothetical protein phrog_780 unknown function unknown function 1 36405 36638
ASZ72908.1 MF668270_p26 hypothetical protein phrog_411 unknown function unknown function 1 25654 25938
ASZ72923.1 MF668270_p42 hypothetical protein phrog_5970 unknown function unknown function -1 31807 32052
ASZ72966.1 MF668270_p90 hypothetical protein phrog_1901 unknown function unknown function 1 49602 49793
ASZ72919.1 MF668270_p37 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29984 30805
ASZ72955.1 MF668270_p77 hypothetical protein phrog_4296 unknown function unknown function 1 46564 46926
ASZ72927.1 MF668270_p46 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 34567 35235
ASZ72957.1 MF668270_p80 hypothetical protein phrog_7196 unknown function unknown function 1 47223 47420
ASZ72990.1 MF668270_p73 hypothetical protein phrog_1311 unknown function unknown function 1 45152 45328
ASZ72918.1 MF668270_p36 hypothetical protein phrog_2004 unknown function unknown function 1 29764 29997
ASZ72946.1 MF668270_p67 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42045 42407
ASZ72958.1 MF668270_p81 hypothetical protein phrog_1943 unknown function unknown function 1 47424 47612
ASZ72898.1 MF668270_p15 minor tail protein phrog_106 minor tail protein tail 1 13062 14771
ASZ72888.1 MF668270_p3 portal protein phrog_104 portal protein head and packaging 1 2255 3625
ASZ72950.1 MF668270_p71 hypothetical protein phrog_2704 unknown function unknown function 1 44864 45013
ASZ72897.1 MF668270_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9531 13061
ASZ72959.1 MF668270_p82 hypothetical protein phrog_1546 unknown function unknown function 1 47609 47959
ASZ72992.1 MF668270_p49 hypothetical protein phrog_5563 unknown function unknown function 1 35880 35975
ASZ72988.1 MF668270_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3612 4367
ASZ72911.1 MF668270_p29 hypothetical protein phrog_29761 unknown function unknown function 1 26286 26447
ASZ72894.1 MF668270_p10 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 7097 7504
ASZ72938.1 MF668270_p59 WhiB family transcription factor phrog_1333 unknown function unknown function 1 39114 39515
ASZ72917.1 MF668270_p35 membrane protein phrog_404 minor tail protein tail 1 29365 29739
ASZ72965.1 MF668270_p89 hypothetical protein phrog_4152 unknown function unknown function 1 49477 49605
ASZ72944.1 MF668270_p65 hypothetical protein phrog_2632 unknown function unknown function 1 40892 41170
ASZ72993.1 MF668270_p85 hypothetical protein singleton unknown function unknown function 1 48298 48540
ASZ72953.1 MF668270_p75 hypothetical protein phrog_5500 unknown function unknown function 1 45447 45665
ASZ72936.1 MF668270_p57 hypothetical protein phrog_7605 unknown function unknown function 1 38587 38775
ASZ72979.1 MF668270_p104 hypothetical protein phrog_1385 unknown function unknown function 1 53272 53514
ASZ72981.1 MF668270_p106 glycosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 53685 55121
ASZ72980.1 MF668270_p105 hypothetical protein phrog_2057 unknown function unknown function 1 53507 53668
ASZ72928.1 MF668270_p47 CRO protein phrog_3 transcriptional repressor transcription regulation 1 35303 35536
ASZ72940.1 MF668270_p61 helix-turn-helix DNA binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40009 40374
ASZ72969.1 MF668270_p93 hypothetical protein phrog_6676 unknown function unknown function 1 50103 50501
ASZ72956.1 MF668270_p78 hypothetical protein phrog_2080 unknown function unknown function 1 46919 47143
ASZ72952.1 MF668270_p74 hypothetical protein phrog_6193 unknown function unknown function 1 45328 45450
ASZ72939.1 MF668270_p60 hypothetical protein phrog_2096 unknown function unknown function 1 39512 40012
ASZ72926.1 MF668270_p45 hypothetical protein phrog_1948 unknown function unknown function -1 33849 34301
ASZ72983.1 MF668270_p108 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 55327 55950
ASZ72987.1 MF668270_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 587 2224
ASZ72982.1 MF668270_p107 hypothetical protein phrog_1693 unknown function unknown function 1 55124 55330
ASZ72920.1 MF668270_p39 hypothetical protein phrog_1791 unknown function unknown function 1 30889 31110
ASZ72968.1 MF668270_p92 hypothetical protein phrog_1545 unknown function unknown function 1 49966 50106
ASZ72932.1 MF668270_p53 hypothetical protein phrog_1797 unknown function unknown function 1 36635 37219
ASZ72895.1 MF668270_p11 major tail protein phrog_476 major tail protein tail 1 7630 8439
ASZ72964.1 MF668270_p88 hypothetical protein phrog_647 unknown function unknown function 1 49160 49480
ASZ72935.1 MF668270_p56 hypothetical protein phrog_1849 unknown function unknown function 1 38174 38590
ASZ72910.1 MF668270_p28 hypothetical protein phrog_13008 unknown function unknown function 1 26088 26228
ASZ72943.1 MF668270_p64 hypothetical protein phrog_11976 unknown function unknown function 1 40753 40899
ASZ72890.1 MF668270_p6 major capsid protein phrog_267 major head protein head and packaging 1 5062 5883
ASZ72948.1 MF668270_p69 DNA methylase phrog_67 DNA methyltransferase other 1 43700 44650
ASZ72960.1 MF668270_p83 hypothetical protein phrog_2591 unknown function unknown function 1 47952 48143
ASZ72961.1 MF668270_p84 hypothetical protein phrog_3647 unknown function unknown function 1 48140 48301
ASZ72903.1 MF668270_p21 minor tail protein phrog_240 head protein head and packaging 1 23049 23390
ASZ72976.1 MF668270_p101 hypothetical protein phrog_6481 unknown function unknown function 1 52459 52668
ASZ72991.1 MF668270_p79 hypothetical protein phrog_9299 unknown function unknown function 1 47140 47226