| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF668271 |
Definition |
Mycobacterium phage Geralt, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
NUCCORE |
Length |
55765 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
97 |
%GC |
61.52 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ73053.1 | MF668271_p58 | RecA DNA recombinase | phrog_1366 | unknown function | unknown function | 1 | 39719 | 40696 |
| ASZ73001.1 | MF668271_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5047 | 5868 |
| ASZ73021.1 | MF668271_p26 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25438 | 25722 |
| ASZ73077.1 | MF668271_p83 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 50100 | 50219 |
| ASZ73060.1 | MF668271_p66 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 44787 | 45014 |
| ASZ73090.1 | MF668271_p96 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 54644 | 55267 |
| ASZ73049.1 | MF668271_p54 | HTH DNA binding protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 38235 | 38876 |
| ASZ73034.1 | MF668271_p39 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 30768 | 30917 |
| ASZ73064.1 | MF668271_p70 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 46662 | 46925 |
| ASZ73059.1 | MF668271_p65 | hypothetical protein | phrog_2001 | unknown function | unknown function | 1 | 44668 | 44790 |
| ASZ73026.1 | MF668271_p31 | lysin B | phrog_102 | endolysin | lysis | 1 | 27520 | 28521 |
| ASZ73035.1 | MF668271_p40 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 30919 | 31131 |
| ASZ73006.1 | MF668271_p11 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7609 | 8418 |
| ASZ72999.1 | MF668271_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3596 | 4351 |
| ASZ73037.1 | MF668271_p42 | membrane protein | phrog_1948 | unknown function | unknown function | -1 | 32943 | 33398 |
| ASZ73056.1 | MF668271_p62 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 41820 | 41975 |
| ASZ73014.1 | MF668271_p19 | minor tail protein, D-ala-D-ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 19930 | 21819 |
| ASZ73010.1 | MF668271_p15 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13011 | 14720 |
| ASZ72996.1 | MF668271_p1 | terminase, small subunit | phrog_226 | minor tail protein | tail | 1 | 108 | 563 |
| ASZ72997.1 | MF668271_p2 | terminase, large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 571 | 2208 |
| ASZ73083.1 | MF668271_p89 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 51838 | 51996 |
| ASZ73091.1 | MF668271_p97 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55267 | 55593 |
| ASZ73030.1 | MF668271_p35 | DnaQ exonuclease (DNA polymerase III subunit) | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29384 | 30205 |
| ASZ73086.1 | MF668271_p92 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 52579 | 52821 |
| ASZ73011.1 | MF668271_p16 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 14805 | 16514 |
| ASZ73073.1 | MF668271_p79 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 49328 | 49522 |
| ASZ73089.1 | MF668271_p95 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 54441 | 54647 |
| ASZ73015.1 | MF668271_p20 | minor tail protein | phrog_2106 | minor tail protein | tail | 1 | 21816 | 22979 |
| ASZ73004.1 | MF668271_p9 | head-to-tail connector protein | phrog_1929 | head-tail connector protein | connector | 1 | 6779 | 7105 |
| ASZ73068.1 | MF668271_p74 | hypothetical protein | phrog_1546 | unknown function | unknown function | 1 | 47624 | 48349 |
| ASZ73022.1 | MF668271_p27 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 25729 | 25875 |
| ASZ73018.1 | MF668271_p23 | hypothetical protein | phrog_2012 | minor tail protein | tail | 1 | 23625 | 24263 |
| ASZ73057.1 | MF668271_p63 | DnaQ exonuclease (DNA polymerase III subunit) | phrog_2259 | Rnase H | DNA, RNA and nucleotide metabolism | 1 | 41968 | 42621 |
| ASZ73019.1 | MF668271_p24 | minor tail protein | phrog_754 | minor tail protein | tail | 1 | 24260 | 25084 |
| ASZ73027.1 | MF668271_p32 | holin | phrog_443 | holin | lysis | 1 | 28536 | 28769 |
| ASZ73076.1 | MF668271_p82 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 49966 | 50103 |
| ASZ73032.1 | MF668271_p37 | membrane protein | phrog_1839 | unknown function | unknown function | 1 | 30504 | 30596 |
| ASZ73074.1 | MF668271_p80 | hypothetical protein | phrog_6625 | unknown function | unknown function | 1 | 49522 | 49785 |
| ASZ73012.1 | MF668271_p17 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 16569 | 17399 |
| ASZ73041.1 | MF668271_p46 | excise | singleton | unknown function | unknown function | 1 | 35133 | 35267 |
| ASZ73063.1 | MF668271_p69 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45814 | 46665 |
| ASZ73016.1 | MF668271_p21 | hypothetical protein | phrog_240 | head protein | head and packaging | 1 | 22993 | 23334 |
| ASZ73046.1 | MF668271_p51 | membrane protein | phrog_658 | unknown function | unknown function | 1 | 36915 | 37262 |
| ASZ73054.1 | MF668271_p59 | hypothetical protein | phrog_4657 | unknown function | unknown function | 1 | 40693 | 41301 |
| ASZ73009.1 | MF668271_p14 | tape measure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 9465 | 13010 |
| ASZ73020.1 | MF668271_p25 | HTH DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25090 | 25287 |
| ASZ72998.1 | MF668271_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2239 | 3609 |
| ASZ73025.1 | MF668271_p30 | lysin A | phrog_700 | endolysin | lysis | 1 | 26327 | 27520 |
| ASZ73080.1 | MF668271_p86 | hypothetical protein | phrog_1467 | unknown function | unknown function | 1 | 50693 | 51337 |
| ASZ73003.1 | MF668271_p8 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 6443 | 6772 |
| ASZ73078.1 | MF668271_p84 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 50216 | 50452 |
| ASZ73028.1 | MF668271_p33 | membrane protein | phrog_404 | minor tail protein | tail | 1 | 28766 | 29140 |
| ASZ73066.1 | MF668271_p72 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 47302 | 47496 |
| ASZ73013.1 | MF668271_p18 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17396 | 19933 |
| ASZ73007.1 | MF668271_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8532 | 9083 |
| ASZ73005.1 | MF668271_p10 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 7095 | 7499 |
| ASZ73088.1 | MF668271_p94 | galactosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 53002 | 54438 |
| ASZ73072.1 | MF668271_p78 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 49065 | 49331 |
| ASZ73017.1 | MF668271_p22 | hypothetical protein | phrog_2005 | minor tail protein | tail | 1 | 23357 | 23611 |
| ASZ73075.1 | MF668271_p81 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 49782 | 49961 |
| ASZ73033.1 | MF668271_p38 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 30634 | 30768 |
| ASZ73000.1 | MF668271_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4378 | 5028 |
| ASZ73039.1 | MF668271_p44 | CRO (contol of repressor's operator) | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34400 | 34633 |
| ASZ73058.1 | MF668271_p64 | DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 42618 | 44642 |
| ASZ73070.1 | MF668271_p76 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 48623 | 48901 |
| ASZ73092.1 | MF668271_p60 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41298 | 41660 |
| ASZ73065.1 | MF668271_p71 | hypothetical protein | phrog_6275 | unknown function | unknown function | 1 | 46922 | 47302 |
| ASZ73040.1 | MF668271_p45 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 34693 | 34983 |
| ASZ73050.1 | MF668271_p55 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 38876 | 39028 |
| ASZ73038.1 | MF668271_p43 | immunity repressor | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 33661 | 34401 |
| ASZ73081.1 | MF668271_p87 | HTH DNA binding protein, MerR-like | phrog_2474 | MerR-like transcriptional regulator | transcription regulation | 1 | 51447 | 51671 |
| ASZ73048.1 | MF668271_p53 | HTH DNA binding proetin | phrog_2096 | unknown function | unknown function | 1 | 37753 | 38238 |
| ASZ73062.1 | MF668271_p68 | hypothetical protein | phrog_2451 | unknown function | unknown function | 1 | 45676 | 45810 |
| ASZ73036.1 | MF668271_p41 | intergrase, (Y-int) | phrog_1 | integrase | integration and excision | 1 | 31564 | 32865 |
| ASZ73082.1 | MF668271_p88 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 51668 | 51832 |
| ASZ73087.1 | MF668271_p93 | hypothetical protein | phrog_2057 | unknown function | unknown function | 1 | 52814 | 52975 |
| ASZ73084.1 | MF668271_p90 | hypothetical protein | phrog_3813 | unknown function | unknown function | 1 | 51993 | 52184 |
| ASZ73023.1 | MF668271_p28 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 25872 | 26024 |
| ASZ73071.1 | MF668271_p77 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | 1 | 48898 | 49065 |
| ASZ73061.1 | MF668271_p67 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 45011 | 45679 |
| ASZ73052.1 | MF668271_p57 | hypothetical protein | phrog_5168 | unknown function | unknown function | 1 | 39258 | 39722 |
| ASZ73043.1 | MF668271_p48 | hypothetical protein | phrog_1816 | unknown function | unknown function | 1 | 35691 | 35879 |
| ASZ73045.1 | MF668271_p50 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 36640 | 36918 |
| ASZ73044.1 | MF668271_p49 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 35876 | 36565 |
| ASZ73002.1 | MF668271_p7 | head-to-tail connector protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5877 | 6446 |
| ASZ73067.1 | MF668271_p73 | hypothetical protein | phrog_9840 | unknown function | unknown function | 1 | 47493 | 47624 |
| ASZ73024.1 | MF668271_p29 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26097 | 26330 |
| ASZ73008.1 | MF668271_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8532 | 9468 |
| ASZ73047.1 | MF668271_p52 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 37262 | 37756 |
| ASZ73042.1 | MF668271_p47 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 35311 | 35694 |
| ASZ73055.1 | MF668271_p61 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 41660 | 41842 |
| ASZ73051.1 | MF668271_p56 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 39028 | 39261 |
| ASZ73085.1 | MF668271_p91 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 52181 | 52582 |
| ASZ73031.1 | MF668271_p36 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30260 | 30511 |
| ASZ73029.1 | MF668271_p34 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29137 | 29397 |
| ASZ73079.1 | MF668271_p85 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 50445 | 50696 |
| ASZ73069.1 | MF668271_p75 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 48346 | 48630 |