Genomic map of Mycobacterium phage Geralt (MF668271)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF668271
Definition
Mycobacterium phage Geralt, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
NUCCORE
Length
55765
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
61.52
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASZ73053.1 MF668271_p58 RecA DNA recombinase phrog_1366 unknown function unknown function 1 39719 40696
ASZ73001.1 MF668271_p6 major capsid protein phrog_267 major head protein head and packaging 1 5047 5868
ASZ73021.1 MF668271_p26 hypothetical protein phrog_411 unknown function unknown function 1 25438 25722
ASZ73077.1 MF668271_p83 hypothetical protein phrog_4126 unknown function unknown function 1 50100 50219
ASZ73060.1 MF668271_p66 hypothetical protein phrog_780 unknown function unknown function 1 44787 45014
ASZ73090.1 MF668271_p96 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 54644 55267
ASZ73049.1 MF668271_p54 HTH DNA binding protein phrog_472 WhiB transcriptional factor transcription regulation 1 38235 38876
ASZ73034.1 MF668271_p39 hypothetical protein phrog_2437 unknown function unknown function -1 30768 30917
ASZ73064.1 MF668271_p70 hypothetical protein phrog_2080 unknown function unknown function 1 46662 46925
ASZ73059.1 MF668271_p65 hypothetical protein phrog_2001 unknown function unknown function 1 44668 44790
ASZ73026.1 MF668271_p31 lysin B phrog_102 endolysin lysis 1 27520 28521
ASZ73035.1 MF668271_p40 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision -1 30919 31131
ASZ73006.1 MF668271_p11 major tail protein phrog_476 major tail protein tail 1 7609 8418
ASZ72999.1 MF668271_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3596 4351
ASZ73037.1 MF668271_p42 membrane protein phrog_1948 unknown function unknown function -1 32943 33398
ASZ73056.1 MF668271_p62 hypothetical protein phrog_1311 unknown function unknown function 1 41820 41975
ASZ73014.1 MF668271_p19 minor tail protein, D-ala-D-ala carboxypeptidase phrog_382 minor tail protein with lysin activity tail 1 19930 21819
ASZ73010.1 MF668271_p15 minor tail protein phrog_106 minor tail protein tail 1 13011 14720
ASZ72996.1 MF668271_p1 terminase, small subunit phrog_226 minor tail protein tail 1 108 563
ASZ72997.1 MF668271_p2 terminase, large subunit phrog_9 terminase large subunit head and packaging 1 571 2208
ASZ73083.1 MF668271_p89 hypothetical protein phrog_1694 unknown function unknown function 1 51838 51996
ASZ73091.1 MF668271_p97 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 55267 55593
ASZ73030.1 MF668271_p35 DnaQ exonuclease (DNA polymerase III subunit) phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29384 30205
ASZ73086.1 MF668271_p92 hypothetical protein phrog_1385 unknown function unknown function 1 52579 52821
ASZ73011.1 MF668271_p16 minor tail protein phrog_110 minor tail protein tail 1 14805 16514
ASZ73073.1 MF668271_p79 hypothetical protein phrog_1901 unknown function unknown function 1 49328 49522
ASZ73089.1 MF668271_p95 hypothetical protein phrog_1693 unknown function unknown function 1 54441 54647
ASZ73015.1 MF668271_p20 minor tail protein phrog_2106 minor tail protein tail 1 21816 22979
ASZ73004.1 MF668271_p9 head-to-tail connector protein phrog_1929 head-tail connector protein connector 1 6779 7105
ASZ73068.1 MF668271_p74 hypothetical protein phrog_1546 unknown function unknown function 1 47624 48349
ASZ73022.1 MF668271_p27 hypothetical protein phrog_932 unknown function unknown function 1 25729 25875
ASZ73018.1 MF668271_p23 hypothetical protein phrog_2012 minor tail protein tail 1 23625 24263
ASZ73057.1 MF668271_p63 DnaQ exonuclease (DNA polymerase III subunit) phrog_2259 Rnase H DNA, RNA and nucleotide metabolism 1 41968 42621
ASZ73019.1 MF668271_p24 minor tail protein phrog_754 minor tail protein tail 1 24260 25084
ASZ73027.1 MF668271_p32 holin phrog_443 holin lysis 1 28536 28769
ASZ73076.1 MF668271_p82 hypothetical protein phrog_1545 unknown function unknown function 1 49966 50103
ASZ73032.1 MF668271_p37 membrane protein phrog_1839 unknown function unknown function 1 30504 30596
ASZ73074.1 MF668271_p80 hypothetical protein phrog_6625 unknown function unknown function 1 49522 49785
ASZ73012.1 MF668271_p17 minor tail protein phrog_732 minor tail protein tail 1 16569 17399
ASZ73041.1 MF668271_p46 excise singleton unknown function unknown function 1 35133 35267
ASZ73063.1 MF668271_p69 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 45814 46665
ASZ73016.1 MF668271_p21 hypothetical protein phrog_240 head protein head and packaging 1 22993 23334
ASZ73046.1 MF668271_p51 membrane protein phrog_658 unknown function unknown function 1 36915 37262
ASZ73054.1 MF668271_p59 hypothetical protein phrog_4657 unknown function unknown function 1 40693 41301
ASZ73009.1 MF668271_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9465 13010
ASZ73020.1 MF668271_p25 HTH DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25090 25287
ASZ72998.1 MF668271_p3 portal protein phrog_104 portal protein head and packaging 1 2239 3609
ASZ73025.1 MF668271_p30 lysin A phrog_700 endolysin lysis 1 26327 27520
ASZ73080.1 MF668271_p86 hypothetical protein phrog_1467 unknown function unknown function 1 50693 51337
ASZ73003.1 MF668271_p8 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 6443 6772
ASZ73078.1 MF668271_p84 hypothetical protein phrog_2278 unknown function unknown function 1 50216 50452
ASZ73028.1 MF668271_p33 membrane protein phrog_404 minor tail protein tail 1 28766 29140
ASZ73066.1 MF668271_p72 hypothetical protein phrog_1943 unknown function unknown function 1 47302 47496
ASZ73013.1 MF668271_p18 minor tail protein phrog_346 minor tail protein tail 1 17396 19933
ASZ73007.1 MF668271_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8532 9083
ASZ73005.1 MF668271_p10 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 7095 7499
ASZ73088.1 MF668271_p94 galactosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 53002 54438
ASZ73072.1 MF668271_p78 hypothetical protein phrog_2939 unknown function unknown function 1 49065 49331
ASZ73017.1 MF668271_p22 hypothetical protein phrog_2005 minor tail protein tail 1 23357 23611
ASZ73075.1 MF668271_p81 hypothetical protein phrog_1091 unknown function unknown function 1 49782 49961
ASZ73033.1 MF668271_p38 hypothetical protein phrog_3693 unknown function unknown function -1 30634 30768
ASZ73000.1 MF668271_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4378 5028
ASZ73039.1 MF668271_p44 CRO (contol of repressor's operator) phrog_3 transcriptional repressor transcription regulation 1 34400 34633
ASZ73058.1 MF668271_p64 DNA methylase phrog_116 DNA methyltransferase other 1 42618 44642
ASZ73070.1 MF668271_p76 hypothetical protein phrog_722 unknown function unknown function 1 48623 48901
ASZ73092.1 MF668271_p60 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41298 41660
ASZ73065.1 MF668271_p71 hypothetical protein phrog_6275 unknown function unknown function 1 46922 47302
ASZ73040.1 MF668271_p45 hypothetical protein phrog_2025 unknown function unknown function 1 34693 34983
ASZ73050.1 MF668271_p55 hypothetical protein phrog_2078 unknown function unknown function 1 38876 39028
ASZ73038.1 MF668271_p43 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 33661 34401
ASZ73081.1 MF668271_p87 HTH DNA binding protein, MerR-like phrog_2474 MerR-like transcriptional regulator transcription regulation 1 51447 51671
ASZ73048.1 MF668271_p53 HTH DNA binding proetin phrog_2096 unknown function unknown function 1 37753 38238
ASZ73062.1 MF668271_p68 hypothetical protein phrog_2451 unknown function unknown function 1 45676 45810
ASZ73036.1 MF668271_p41 intergrase, (Y-int) phrog_1 integrase integration and excision 1 31564 32865
ASZ73082.1 MF668271_p88 hypothetical protein phrog_1869 unknown function unknown function 1 51668 51832
ASZ73087.1 MF668271_p93 hypothetical protein phrog_2057 unknown function unknown function 1 52814 52975
ASZ73084.1 MF668271_p90 hypothetical protein phrog_3813 unknown function unknown function 1 51993 52184
ASZ73023.1 MF668271_p28 hypothetical protein phrog_1172 unknown function unknown function 1 25872 26024
ASZ73071.1 MF668271_p77 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision 1 48898 49065
ASZ73061.1 MF668271_p67 DNA methylase phrog_67 DNA methyltransferase other 1 45011 45679
ASZ73052.1 MF668271_p57 hypothetical protein phrog_5168 unknown function unknown function 1 39258 39722
ASZ73043.1 MF668271_p48 hypothetical protein phrog_1816 unknown function unknown function 1 35691 35879
ASZ73045.1 MF668271_p50 hypothetical protein phrog_1849 unknown function unknown function 1 36640 36918
ASZ73044.1 MF668271_p49 hypothetical protein phrog_1797 unknown function unknown function 1 35876 36565
ASZ73002.1 MF668271_p7 head-to-tail connector protein phrog_2377 head-tail adaptor Ad1 connector 1 5877 6446
ASZ73067.1 MF668271_p73 hypothetical protein phrog_9840 unknown function unknown function 1 47493 47624
ASZ73024.1 MF668271_p29 hypothetical protein phrog_747 unknown function unknown function 1 26097 26330
ASZ73008.1 MF668271_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8532 9468
ASZ73047.1 MF668271_p52 WhiB family transcription factor phrog_1333 unknown function unknown function 1 37262 37756
ASZ73042.1 MF668271_p47 hypothetical protein phrog_2021 unknown function unknown function 1 35311 35694
ASZ73055.1 MF668271_p61 hypothetical protein phrog_2070 unknown function unknown function 1 41660 41842
ASZ73051.1 MF668271_p56 hypothetical protein phrog_1834 unknown function unknown function 1 39028 39261
ASZ73085.1 MF668271_p91 hypothetical protein phrog_1186 unknown function unknown function 1 52181 52582
ASZ73031.1 MF668271_p36 hypothetical protein phrog_1791 unknown function unknown function 1 30260 30511
ASZ73029.1 MF668271_p34 hypothetical protein phrog_2004 unknown function unknown function 1 29137 29397
ASZ73079.1 MF668271_p85 hypothetical protein phrog_2247 unknown function unknown function 1 50445 50696
ASZ73069.1 MF668271_p75 hypothetical protein phrog_647 unknown function unknown function 1 48346 48630