| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF668274 |
Definition |
Arthrobacter phage JayCookie, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Radnorvirus; unclassified Radnorvirus. |
DB of origin |
NUCCORE |
Length |
70362 |
Host Name |
Arthrobacter sp. |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
112 |
%GC |
61.67 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ73264.1 | MF668274_p53 | hypothetical protein | phrog_8385 | unknown function | unknown function | 1 | 40436 | 40795 |
| ASZ73234.1 | MF668274_p23 | LysM domain protein | phrog_380 | endolysin | lysis | 1 | 19267 | 19935 |
| ASZ73301.1 | MF668274_p90 | helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 59254 | 60999 |
| ASZ73314.1 | MF668274_p103 | hypothetical protein | phrog_25686 | unknown function | unknown function | 1 | 65445 | 65642 |
| ASZ73250.1 | MF668274_p39 | baseplate J-like protein | phrog_6 | baseplate wedge subunit | tail | 1 | 30830 | 31951 |
| ASZ73302.1 | MF668274_p91 | hypothetical protein | phrog_8377 | unknown function | unknown function | 1 | 60996 | 61208 |
| ASZ73215.1 | MF668274_p4 | portal protein | phrog_113 | portal protein | head and packaging | 1 | 2813 | 4237 |
| ASZ73257.1 | MF668274_p46 | RecE-like endonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 36606 | 37559 |
| ASZ73303.1 | MF668274_p92 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 61198 | 61560 |
| ASZ73212.1 | MF668274_p1 | hypothetical protein | phrog_5264 | unknown function | unknown function | 1 | 1 | 660 |
| ASZ73270.1 | MF668274_p59 | hypothetical protein | phrog_2864 | unknown function | unknown function | 1 | 43048 | 43239 |
| ASZ73272.1 | MF668274_p61 | hypothetical protein | phrog_8413 | unknown function | unknown function | 1 | 43732 | 43971 |
| ASZ73265.1 | MF668274_p54 | hypothetical protein | phrog_8739 | unknown function | unknown function | 1 | 40792 | 41508 |
| ASZ73322.1 | MF668274_p111 | hypothetical protein | phrog_8478 | amidase | lysis | 1 | 69433 | 69984 |
| ASZ73294.1 | MF668274_p83 | hypothetical protein | phrog_8619 | unknown function | unknown function | 1 | 56385 | 56957 |
| ASZ73278.1 | MF668274_p67 | hypothetical protein | phrog_8876 | unknown function | unknown function | 1 | 46077 | 46265 |
| ASZ73241.1 | MF668274_p30 | hypothetical protein | phrog_5480 | unknown function | unknown function | 1 | 26147 | 26551 |
| ASZ73323.1 | MF668274_p112 | hypothetical protein | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 69968 | 70306 |
| ASZ73274.1 | MF668274_p63 | hypothetical protein | phrog_7014 | unknown function | unknown function | 1 | 45128 | 45286 |
| ASZ73285.1 | MF668274_p74 | hypothetical protein | phrog_8686 | unknown function | unknown function | 1 | 49338 | 49895 |
| ASZ73271.1 | MF668274_p60 | hypothetical protein | phrog_8327 | unknown function | unknown function | 1 | 43236 | 43739 |
| ASZ73319.1 | MF668274_p108 | hypothetical protein | phrog_8530 | unknown function | unknown function | 1 | 68447 | 68839 |
| ASZ73312.1 | MF668274_p101 | hypothetical protein | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 64271 | 64618 |
| ASZ73251.1 | MF668274_p40 | hypothetical protein | phrog_7455 | tail protein | tail | 1 | 31961 | 33817 |
| ASZ73320.1 | MF668274_p109 | helix-turn-helix DNA binding protein | phrog_7351 | unknown function | unknown function | 1 | 68963 | 69106 |
| ASZ73286.1 | MF668274_p75 | hypothetical protein | phrog_9127 | unknown function | unknown function | 1 | 49882 | 50049 |
| ASZ73310.1 | MF668274_p99 | hypothetical protein | phrog_17294 | unknown function | unknown function | 1 | 63791 | 64024 |
| ASZ73309.1 | MF668274_p98 | hypothetical protein | phrog_2831 | unknown function | unknown function | 1 | 63408 | 63794 |
| ASZ73311.1 | MF668274_p100 | hypothetical protein | singleton | unknown function | unknown function | 1 | 64057 | 64281 |
| ASZ73225.1 | MF668274_p14 | hypothetical protein | phrog_5280 | unknown function | unknown function | 1 | 11004 | 11507 |
| ASZ73287.1 | MF668274_p76 | hypothetical protein | phrog_9916 | unknown function | unknown function | 1 | 50046 | 50282 |
| ASZ73244.1 | MF668274_p33 | hypothetical protein | phrog_1933 | unknown function | unknown function | -1 | 28743 | 28961 |
| ASZ73222.1 | MF668274_p11 | capsid decoration protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 9275 | 9658 |
| ASZ73254.1 | MF668274_p43 | DNA repair protein | phrog_1499 | unknown function | unknown function | 1 | 34499 | 35905 |
| ASZ73269.1 | MF668274_p58 | hypothetical protein | phrog_8331 | unknown function | unknown function | 1 | 42656 | 43051 |
| ASZ73227.1 | MF668274_p16 | hypothetical protein | phrog_5178 | unknown function | unknown function | 1 | 11981 | 12598 |
| ASZ73295.1 | MF668274_p84 | hypothetical protein | phrog_8502 | unknown function | unknown function | 1 | 56954 | 57391 |
| ASZ73267.1 | MF668274_p56 | hypothetical protein | phrog_9663 | unknown function | unknown function | 1 | 41963 | 42139 |
| ASZ73315.1 | MF668274_p104 | hypothetical protein | phrog_8556 | unknown function | unknown function | 1 | 65724 | 66449 |
| ASZ73318.1 | MF668274_p107 | hypothetical protein | phrog_8795 | unknown function | unknown function | 1 | 68027 | 68374 |
| ASZ73240.1 | MF668274_p29 | hypothetical protein | phrog_5303 | unknown function | unknown function | 1 | 25932 | 26150 |
| ASZ73268.1 | MF668274_p57 | hypothetical protein | phrog_8744 | unknown function | unknown function | 1 | 42154 | 42663 |
| ASZ73218.1 | MF668274_p7 | hypothetical protein | phrog_9140 | unknown function | unknown function | 1 | 6723 | 6953 |
| ASZ73230.1 | MF668274_p19 | hypothetical protein | phrog_5102 | tail tube protein | tail | 1 | 14373 | 14777 |
| ASZ73248.1 | MF668274_p37 | helix-turn-helix DNA binding domain protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30169 | 30387 |
| ASZ73237.1 | MF668274_p26 | minor tail protein | phrog_5207 | unknown function | unknown function | 1 | 21688 | 23658 |
| ASZ73277.1 | MF668274_p66 | hypothetical protein | phrog_24811 | unknown function | unknown function | 1 | 45767 | 46093 |
| ASZ73279.1 | MF668274_p68 | hypothetical protein | phrog_16378 | unknown function | unknown function | 1 | 46268 | 46399 |
| ASZ73247.1 | MF668274_p36 | hypothetical protein | phrog_8361 | unknown function | unknown function | -1 | 29554 | 30108 |
| ASZ73266.1 | MF668274_p55 | hypothetical protein | phrog_8694 | unknown function | unknown function | 1 | 41505 | 41966 |
| ASZ73226.1 | MF668274_p15 | minor tail protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 11511 | 11981 |
| ASZ73217.1 | MF668274_p6 | hypothetical protein | phrog_3585 | immunity protein | other | 1 | 6253 | 6579 |
| ASZ73259.1 | MF668274_p48 | hypothetical protein | phrog_9097 | unknown function | unknown function | 1 | 38550 | 38702 |
| ASZ73253.1 | MF668274_p42 | hypothetical protein | phrog_9274 | unknown function | unknown function | 1 | 34275 | 34502 |
| ASZ73316.1 | MF668274_p105 | hypothetical protein | phrog_8433 | unknown function | unknown function | 1 | 66537 | 66776 |
| ASZ73232.1 | MF668274_p21 | hypothetical protein | phrog_8820 | unknown function | unknown function | 1 | 15577 | 15714 |
| ASZ73300.1 | MF668274_p89 | endonuclease | phrog_5928 | unknown function | unknown function | 1 | 58883 | 59257 |
| ASZ73281.1 | MF668274_p70 | hypothetical protein | phrog_4657 | unknown function | unknown function | 1 | 46917 | 47771 |
| ASZ73216.1 | MF668274_p5 | capsid assembly protein | phrog_595 | head maturation protease | head and packaging | 1 | 4243 | 6222 |
| ASZ73260.1 | MF668274_p49 | hypothetical protein | phrog_9387 | unknown function | unknown function | 1 | 38705 | 38971 |
| ASZ73214.1 | MF668274_p3 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 1291 | 2769 |
| ASZ73224.1 | MF668274_p13 | hypothetical protein | phrog_8546 | unknown function | unknown function | 1 | 10582 | 10983 |
| ASZ73236.1 | MF668274_p25 | minor tail protein | phrog_5161 | unknown function | unknown function | 1 | 21287 | 21691 |
| ASZ73220.1 | MF668274_p9 | hypothetical protein | phrog_8348 | unknown function | unknown function | 1 | 7427 | 7810 |
| ASZ73235.1 | MF668274_p24 | minor tail protein | phrog_52 | tail protein | tail | 1 | 19941 | 21284 |
| ASZ73297.1 | MF668274_p86 | hypothetical protein | phrog_9063 | unknown function | unknown function | 1 | 57730 | 58179 |
| ASZ73317.1 | MF668274_p106 | DNA polymerase III subunit beta | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | 1 | 66789 | 67904 |
| ASZ73276.1 | MF668274_p65 | hypothetical protein | phrog_9156 | unknown function | unknown function | 1 | 45374 | 45736 |
| ASZ73307.1 | MF668274_p96 | hypothetical protein | phrog_8648 | unknown function | unknown function | 1 | 62834 | 63031 |
| ASZ73219.1 | MF668274_p8 | hypothetical protein | phrog_10034 | unknown function | unknown function | 1 | 6965 | 7420 |
| ASZ73299.1 | MF668274_p88 | hypothetical protein | phrog_8675 | unknown function | unknown function | 1 | 58565 | 58852 |
| ASZ73296.1 | MF668274_p85 | hypothetical protein | phrog_8751 | unknown function | unknown function | 1 | 57378 | 57737 |
| ASZ73280.1 | MF668274_p69 | hypothetical protein | phrog_9166 | unknown function | unknown function | 1 | 46402 | 46920 |
| ASZ73242.1 | MF668274_p31 | lysin A | phrog_291 | endolysin | lysis | 1 | 26548 | 28203 |
| ASZ73238.1 | MF668274_p27 | minor tail protein | phrog_5231 | unknown function | unknown function | 1 | 23711 | 25648 |
| ASZ73304.1 | MF668274_p93 | hypothetical protein | phrog_8528 | unknown function | unknown function | 1 | 61557 | 62156 |
| ASZ73252.1 | MF668274_p41 | hypothetical protein | phrog_9333 | unknown function | unknown function | 1 | 34039 | 34278 |
| ASZ73321.1 | MF668274_p110 | hypothetical protein | phrog_9617 | unknown function | unknown function | 1 | 69111 | 69404 |
| ASZ73231.1 | MF668274_p20 | hypothetical protein | phrog_5088 | tail assembly chaperone | tail | 1 | 14909 | 15532 |
| ASZ73213.1 | MF668274_p2 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 657 | 1310 |
| ASZ73293.1 | MF668274_p82 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 54405 | 56327 |
| ASZ73243.1 | MF668274_p32 | holin | phrog_8269 | holin | lysis | 1 | 28218 | 28688 |
| ASZ73284.1 | MF668274_p73 | endolysin domain protein | phrog_8605 | endolysin | lysis | 1 | 48881 | 49348 |
| ASZ73245.1 | MF668274_p34 | hypothetical protein | phrog_9234 | unknown function | unknown function | -1 | 28954 | 29115 |
| ASZ73256.1 | MF668274_p45 | hypothetical protein | phrog_8731 | unknown function | unknown function | 1 | 36187 | 36609 |
| ASZ73246.1 | MF668274_p35 | hypothetical protein | phrog_9254 | unknown function | unknown function | -1 | 29210 | 29521 |
| ASZ73291.1 | MF668274_p80 | cytosine DNA methylase | phrog_363 | DNA methyltransferase | other | 1 | 52232 | 53089 |
| ASZ73283.1 | MF668274_p72 | hypothetical protein | phrog_8715 | unknown function | unknown function | 1 | 48460 | 48888 |
| ASZ73273.1 | MF668274_p62 | hypothetical protein | phrog_8799 | unknown function | unknown function | 1 | 43972 | 45147 |
| ASZ73308.1 | MF668274_p97 | hypothetical protein | phrog_6641 | secreted protein | other | 1 | 63028 | 63411 |
| ASZ73306.1 | MF668274_p95 | endodeoxyribonuclease | phrog_34 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 62428 | 62841 |
| ASZ73292.1 | MF668274_p81 | DNA methyltransferase domain protein | phrog_1008 | DNA methyltransferase | other | 1 | 53052 | 54329 |
| ASZ73288.1 | MF668274_p77 | hypothetical protein | phrog_9855 | unknown function | unknown function | 1 | 50287 | 50484 |
| ASZ73223.1 | MF668274_p12 | major capsid protein | phrog_1650 | major head protein | head and packaging | 1 | 9683 | 10579 |
| ASZ73305.1 | MF668274_p94 | hypothetical protein | phrog_9161 | unknown function | unknown function | 1 | 62160 | 62441 |
| ASZ73313.1 | MF668274_p102 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 64608 | 65165 |
| ASZ73221.1 | MF668274_p10 | capsid maturation protease | phrog_3894 | head maturation protease | head and packaging | 1 | 7817 | 9271 |
| ASZ73228.1 | MF668274_p17 | hypothetical protein | phrog_8507 | unknown function | unknown function | 1 | 12617 | 12898 |
| ASZ73255.1 | MF668274_p44 | helix-turn-helix DNA binding domain protein | phrog_8615 | unknown function | unknown function | 1 | 35908 | 36162 |
| ASZ73239.1 | MF668274_p28 | hypothetical protein | phrog_4565 | unknown function | unknown function | 1 | 25648 | 25935 |
| ASZ73262.1 | MF668274_p51 | hypothetical protein | phrog_3926 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 39354 | 39872 |
| ASZ73249.1 | MF668274_p38 | baseplate wedge protein | phrog_5026 | baseplate protein | tail | 1 | 30499 | 30837 |
| ASZ73290.1 | MF668274_p79 | hypothetical protein | phrog_8725 | unknown function | unknown function | 1 | 51074 | 52147 |
| ASZ73233.1 | MF668274_p22 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 15730 | 19266 |
| ASZ73298.1 | MF668274_p87 | hypothetical protein | phrog_8410 | unknown function | unknown function | 1 | 58169 | 58468 |
| ASZ73263.1 | MF668274_p52 | hypothetical protein | phrog_34179 | unknown function | unknown function | 1 | 40179 | 40439 |
| ASZ73261.1 | MF668274_p50 | hypothetical protein | phrog_8370 | unknown function | unknown function | 1 | 38968 | 39285 |
| ASZ73258.1 | MF668274_p47 | recombinase | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 37556 | 38515 |
| ASZ73275.1 | MF668274_p64 | hypothetical protein | phrog_13067 | unknown function | unknown function | 1 | 45276 | 45377 |
| ASZ73282.1 | MF668274_p71 | hypothetical protein | phrog_8388 | unknown function | unknown function | 1 | 47768 | 48193 |
| ASZ73289.1 | MF668274_p78 | hypothetical protein | phrog_8606 | unknown function | unknown function | 1 | 50481 | 51077 |
| ASZ73229.1 | MF668274_p18 | tail sheath protein | phrog_23 | tail sheath | tail | 1 | 12902 | 14350 |