| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF668277 |
Definition |
Mycobacterium phage MadamMonkfish, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
NUCCORE |
Length |
75554 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
146 |
%GC |
63.02 |
Number of singletons |
0 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ73516.1 | MF668277_p29 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 27968 | 28396 |
| ASZ73527.1 | MF668277_p40 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 33524 | 33715 |
| ASZ73586.1 | MF668277_p99 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 58082 | 59314 |
| ASZ73523.1 | MF668277_p36 | membrane protein | phrog_726 | unknown function | unknown function | 1 | 32130 | 32546 |
| ASZ73616.1 | MF668277_p129 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 69827 | 70195 |
| ASZ73572.1 | MF668277_p85 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 51120 | 51485 |
| ASZ73593.1 | MF668277_p106 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 62399 | 62623 |
| ASZ73621.1 | MF668277_p134 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 71434 | 71640 |
| ASZ73618.1 | MF668277_p131 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 70665 | 70994 |
| ASZ73545.1 | MF668277_p58 | pentapeptide repeat protein | phrog_923 | unknown function | unknown function | 1 | 40098 | 40943 |
| ASZ73496.1 | MF668277_p9 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 3823 | 4044 |
| ASZ73549.1 | MF668277_p62 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 41910 | 42215 |
| ASZ73495.1 | MF668277_p8 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 2141 | 3811 |
| ASZ73547.1 | MF668277_p60 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 41088 | 41366 |
| ASZ73555.1 | MF668277_p68 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 44255 | 44665 |
| ASZ73493.1 | MF668277_p6 | hypothetical protein | phrog_4101 | unknown function | unknown function | -1 | 1546 | 1788 |
| ASZ73562.1 | MF668277_p75 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 47069 | 47302 |
| ASZ73603.1 | MF668277_p116 | hypothetical protein | phrog_23135 | unknown function | unknown function | 1 | 66376 | 66648 |
| ASZ73592.1 | MF668277_p105 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61655 | 61945 |
| ASZ73587.1 | MF668277_p100 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59307 | 59747 |
| ASZ73543.1 | MF668277_p56 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 39869 | 39967 |
| ASZ73575.1 | MF668277_p88 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 52190 | 53131 |
| ASZ73546.1 | MF668277_p59 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 40945 | 41091 |
| ASZ73619.1 | MF668277_p132 | hypothetical protein | phrog_4547 | unknown function | unknown function | -1 | 70996 | 71313 |
| ASZ73602.1 | MF668277_p115 | hypothetical protein | phrog_3167 | unknown function | unknown function | 1 | 66042 | 66383 |
| ASZ73541.1 | MF668277_p54 | membrane protein | phrog_950 | unknown function | unknown function | -1 | 38344 | 39117 |
| ASZ73613.1 | MF668277_p126 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 68802 | 69065 |
| ASZ73626.1 | MF668277_p139 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 73166 | 73402 |
| ASZ73550.1 | MF668277_p63 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 42234 | 42341 |
| ASZ73544.1 | MF668277_p57 | membrane protein | phrog_2852 | unknown function | unknown function | 1 | 39964 | 40101 |
| ASZ73573.1 | MF668277_p86 | resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 51482 | 51844 |
| ASZ73606.1 | MF668277_p119 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 67028 | 67489 |
| ASZ73517.1 | MF668277_p30 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28383 | 28568 |
| ASZ73490.1 | MF668277_p3 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 557 | 742 |
| ASZ73611.1 | MF668277_p124 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 68147 | 68278 |
| ASZ73590.1 | MF668277_p103 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 60996 | 61286 |
| ASZ73508.1 | MF668277_p20 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 11894 | 12765 |
| ASZ73510.1 | MF668277_p23 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 17515 | 19176 |
| ASZ73528.1 | MF668277_p41 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 33718 | 34185 |
| ASZ73556.1 | MF668277_p69 | ERF family ssDNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44658 | 45380 |
| ASZ73567.1 | MF668277_p80 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 48896 | 49234 |
| ASZ73557.1 | MF668277_p70 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 45373 | 45684 |
| ASZ73561.1 | MF668277_p74 | membrane protein | phrog_1622 | unknown function | unknown function | 1 | 46893 | 47066 |
| ASZ73559.1 | MF668277_p72 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 46154 | 46522 |
| ASZ73497.1 | MF668277_p10 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4031 | 5587 |
| ASZ73511.1 | MF668277_p24 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19164 | 20843 |
| ASZ73596.1 | MF668277_p109 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 63271 | 63750 |
| ASZ73507.1 | MF668277_p21 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 11894 | 12355 |
| ASZ73584.1 | MF668277_p97 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 57211 | 57546 |
| ASZ73564.1 | MF668277_p77 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 47709 | 48026 |
| ASZ73633.1 | MF668277_p146 | HNH endonuclease | phrog_589 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 74973 | 75320 |
| ASZ73576.1 | MF668277_p89 | hypothetical protein | phrog_2495 | unknown function | unknown function | 1 | 53238 | 53606 |
| ASZ73600.1 | MF668277_p113 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 65752 | 65889 |
| ASZ73502.1 | MF668277_p15 | head-to-tail connector protein | phrog_1531 | head closure | connector | 1 | 9145 | 9480 |
| ASZ73599.1 | MF668277_p112 | DNA recombinase | phrog_97 | UvsX-like recombinase | other | 1 | 64793 | 65755 |
| ASZ73537.1 | MF668277_p50 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 35866 | 36267 |
| ASZ73617.1 | MF668277_p130 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 70192 | 70650 |
| ASZ73489.1 | MF668277_p2 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 267 | 560 |
| ASZ73570.1 | MF668277_p83 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 50671 | 50931 |
| ASZ73578.1 | MF668277_p91 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 53698 | 55023 |
| ASZ73627.1 | MF668277_p140 | hypothetical protein | phrog_7581 | unknown function | unknown function | -1 | 73405 | 73617 |
| ASZ73591.1 | MF668277_p104 | helix-turn-helix DNA binding domain protein | phrog_1969 | unknown function | unknown function | 1 | 61291 | 61602 |
| ASZ73524.1 | MF668277_p37 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 32553 | 32798 |
| ASZ73610.1 | MF668277_p123 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 67968 | 68147 |
| ASZ73601.1 | MF668277_p114 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 65876 | 66049 |
| ASZ73625.1 | MF668277_p138 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 72996 | 73169 |
| ASZ73620.1 | MF668277_p133 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 71319 | 71444 |
| ASZ73582.1 | MF668277_p95 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 56310 | 56762 |
| ASZ73583.1 | MF668277_p96 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 56766 | 57209 |
| ASZ73589.1 | MF668277_p102 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 60639 | 60995 |
| ASZ73491.1 | MF668277_p4 | hypothetical protein | phrog_3858 | unknown function | unknown function | 1 | 739 | 1020 |
| ASZ73515.1 | MF668277_p28 | minor tail protein | phrog_553 | minor tail protein | tail | 1 | 26936 | 27898 |
| ASZ73492.1 | MF668277_p5 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 1013 | 1474 |
| ASZ73629.1 | MF668277_p142 | hypothetical protein | phrog_5970 | unknown function | unknown function | -1 | 73839 | 74087 |
| ASZ73580.1 | MF668277_p93 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 55878 | 56138 |
| ASZ73500.1 | MF668277_p13 | head-to-tail connector protein | phrog_2796 | head-tail connector protein | connector | 1 | 8385 | 8564 |
| ASZ73631.1 | MF668277_p144 | peptidase | phrog_2904 | unknown function | unknown function | 1 | 74340 | 74687 |
| ASZ73501.1 | MF668277_p14 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 8564 | 9130 |
| ASZ73503.1 | MF668277_p16 | head-to-tail connector protein | phrog_2805 | minor tail protein | tail | 1 | 9477 | 9857 |
| ASZ73577.1 | MF668277_p90 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 53603 | 53701 |
| ASZ73632.1 | MF668277_p145 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 74762 | 74983 |
| ASZ73542.1 | MF668277_p55 | immunity repressor | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 39212 | 39643 |
| ASZ73539.1 | MF668277_p52 | integrase | phrog_1 | integrase | integration and excision | 1 | 37107 | 37988 |
| ASZ73630.1 | MF668277_p143 | hypothetical protein | phrog_5130 | unknown function | unknown function | -1 | 74084 | 74275 |
| ASZ73558.1 | MF668277_p71 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 45684 | 46154 |
| ASZ73551.1 | MF668277_p64 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 42349 | 42582 |
| ASZ73519.1 | MF668277_p32 | lysin A | phrog_317 | endolysin | lysis | 1 | 29059 | 30561 |
| ASZ73566.1 | MF668277_p79 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 48249 | 48899 |
| ASZ73521.1 | MF668277_p34 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 30941 | 31279 |
| ASZ73607.1 | MF668277_p120 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 67486 | 67653 |
| ASZ73526.1 | MF668277_p39 | DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 33090 | 33476 |
| ASZ73624.1 | MF668277_p137 | hypothetical protein | phrog_4496 | unknown function | unknown function | -1 | 72638 | 72985 |
| ASZ73499.1 | MF668277_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 6769 | 8262 |
| ASZ73512.1 | MF668277_p25 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 20852 | 21685 |
| ASZ73520.1 | MF668277_p33 | holin | phrog_526 | holin | lysis | 1 | 30565 | 30948 |
| ASZ73506.1 | MF668277_p19 | hypothetical protein | phrog_5711 | head fiber protein | head and packaging | 1 | 11300 | 11773 |
| ASZ73608.1 | MF668277_p121 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 67637 | 67837 |
| ASZ73588.1 | MF668277_p101 | protease | phrog_94 | head maturation protease | head and packaging | 1 | 59863 | 60642 |
| ASZ73605.1 | MF668277_p118 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 66825 | 67079 |
| ASZ73530.1 | MF668277_p43 | hypothetical protein | phrog_3472 | unknown function | unknown function | -1 | 34544 | 34798 |
| ASZ73623.1 | MF668277_p136 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 72238 | 72633 |
| ASZ73628.1 | MF668277_p141 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 73614 | 73811 |
| ASZ73505.1 | MF668277_p18 | major tail protein | phrog_476 | major tail protein | tail | 1 | 10266 | 11240 |
| ASZ73581.1 | MF668277_p94 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 56155 | 56313 |
| ASZ73565.1 | MF668277_p78 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 48016 | 48252 |
| ASZ73494.1 | MF668277_p7 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1788 | 2096 |
| ASZ73533.1 | MF668277_p46 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 35093 | 35260 |
| ASZ73532.1 | MF668277_p45 | hypothetical protein | phrog_4396 | unknown function | unknown function | -1 | 34965 | 35093 |
| ASZ73598.1 | MF668277_p111 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 64543 | 64785 |
| ASZ73513.1 | MF668277_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 21702 | 24098 |
| ASZ73538.1 | MF668277_p51 | membrane protein | phrog_2847 | unknown function | unknown function | -1 | 36554 | 36856 |
| ASZ73594.1 | MF668277_p107 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 62620 | 62883 |
| ASZ73518.1 | MF668277_p31 | membrane protein | phrog_411 | unknown function | unknown function | 1 | 28701 | 28985 |
| ASZ73595.1 | MF668277_p108 | glycosyltransferase | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 62894 | 63268 |
| ASZ73568.1 | MF668277_p81 | dsDNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 49227 | 50489 |
| ASZ73597.1 | MF668277_p110 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 63761 | 64546 |
| ASZ73609.1 | MF668277_p122 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 67834 | 67971 |
| ASZ73560.1 | MF668277_p73 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 46525 | 46893 |
| ASZ73504.1 | MF668277_p17 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 9835 | 10239 |
| ASZ73579.1 | MF668277_p92 | helix-turn-helix DNA binding domain protein | phrog_1590 | unknown function | unknown function | 1 | 55060 | 55881 |
| ASZ73488.1 | MF668277_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 10 | 270 |
| ASZ73552.1 | MF668277_p65 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 42582 | 42743 |
| ASZ73525.1 | MF668277_p38 | hypothetical protein | phrog_10154 | unknown function | unknown function | -1 | 32938 | 33084 |
| ASZ73529.1 | MF668277_p42 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 34182 | 34547 |
| ASZ73548.1 | MF668277_p61 | hypothetical protein | phrog_4633 | unknown function | unknown function | 1 | 41675 | 41863 |
| ASZ73536.1 | MF668277_p49 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 35720 | 35866 |
| ASZ73554.1 | MF668277_p67 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 43290 | 44258 |
| ASZ73569.1 | MF668277_p82 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 50486 | 50674 |
| ASZ73535.1 | MF668277_p48 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 35486 | 35701 |
| ASZ73571.1 | MF668277_p84 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 50906 | 51127 |
| ASZ73531.1 | MF668277_p44 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 34795 | 34968 |
| ASZ73498.1 | MF668277_p11 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 5590 | 6681 |
| ASZ73522.1 | MF668277_p35 | lysin B | phrog_102 | endolysin | lysis | 1 | 31276 | 32133 |
| ASZ73574.1 | MF668277_p87 | membrane protein | phrog_2894 | unknown function | unknown function | 1 | 51841 | 52035 |
| ASZ73540.1 | MF668277_p53 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 38127 | 38366 |
| ASZ73622.1 | MF668277_p135 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 71686 | 72198 |
| ASZ73615.1 | MF668277_p128 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 69570 | 69830 |
| ASZ73509.1 | MF668277_p22 | tape measure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 12758 | 17485 |
| ASZ73585.1 | MF668277_p98 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 57543 | 58085 |
| ASZ73604.1 | MF668277_p117 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 66608 | 66844 |
| ASZ73614.1 | MF668277_p127 | dsDNA partitioning protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 69062 | 69451 |
| ASZ73514.1 | MF668277_p27 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24095 | 26935 |
| ASZ73553.1 | MF668277_p66 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 42964 | 43293 |
| ASZ73612.1 | MF668277_p125 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 68262 | 68423 |
| ASZ73563.1 | MF668277_p76 | ssDNA binding protein | phrog_289 | GTP-binding domain | other | 1 | 47299 | 47712 |
| ASZ73534.1 | MF668277_p47 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 35257 | 35493 |