Genomic map of Mycobacterium phage RitaG (MF668281)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF668281
Definition
Mycobacterium phage RitaG, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus.
DB of origin
NUCCORE
Length
57789
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
103
%GC
61.6
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASZ73838.1 MF668281_p64 DNA methylase phrog_3008 DNA methyltransferase other 1 43625 43876
ASZ73869.1 MF668281_p97 hypothetical protein phrog_1186 unknown function unknown function 1 54206 54607
ASZ73854.1 MF668281_p82 hypothetical protein phrog_647 unknown function unknown function 1 50372 50656
ASZ73840.1 MF668281_p67 hypothetical protein phrog_2070 unknown function unknown function 1 44242 44412
ASZ73786.1 MF668281_p10 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 7095 7499
ASZ73842.1 MF668281_p69 hypothetical protein phrog_2259 Rnase H DNA, RNA and nucleotide metabolism 1 44538 45191
ASZ73796.1 MF668281_p20 minor tail protein phrog_2106 minor tail protein tail 1 21977 23179
ASZ73781.1 MF668281_p5 scaffolding protein phrog_2592 head scaffolding protein head and packaging 1 4378 5028
ASZ73831.1 MF668281_p56 hypothetical protein phrog_2078 unknown function unknown function 1 39193 39348
ASZ73825.1 MF668281_p50 hypothetical protein phrog_1849 unknown function unknown function 1 36961 37239
ASZ73834.1 MF668281_p59 DNA recombinase phrog_1366 unknown function unknown function 1 40039 41016
ASZ73868.1 MF668281_p96 hypothetical protein phrog_3813 unknown function unknown function 1 54018 54209
ASZ73818.1 MF668281_p43 immunity repressor phrog_2838 transcriptional repressor transcription regulation -1 33982 34608
ASZ73857.1 MF668281_p85 hypothetical protein phrog_2939 unknown function unknown function 1 51144 51356
ASZ73824.1 MF668281_p49 hypothetical protein phrog_1797 unknown function unknown function 1 36197 36886
ASZ73787.1 MF668281_p11 major tail subunit phrog_476 major tail protein tail 1 7534 8418
ASZ73828.1 MF668281_p53 hypothetical protein phrog_2096 unknown function unknown function 1 38074 38559
ASZ73879.1 MF668281_p75 hypothetical protein phrog_2451 unknown function unknown function 1 47678 47836
ASZ73808.1 MF668281_p32 lysin B phrog_102 endolysin lysis 1 27960 28961
ASZ73878.1 MF668281_p65 hypothetical protein phrog_6573 unknown function unknown function 1 43992 44099
ASZ73823.1 MF668281_p48 hypothetical protein phrog_1816 unknown function unknown function 1 36012 36200
ASZ73848.1 MF668281_p76 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 47840 48691
ASZ73855.1 MF668281_p83 hypothetical protein phrog_722 unknown function unknown function 1 50649 50927
ASZ73794.1 MF668281_p18 minor tail protein phrog_346 minor tail protein tail 1 17539 20091
ASZ73797.1 MF668281_p21 minor tail protein phrog_240 head protein head and packaging 1 23203 23544
ASZ73809.1 MF668281_p33 holin phrog_443 holin lysis 1 28977 29210
ASZ73830.1 MF668281_p55 helix-turn-helix DNA binding domain protein phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 38831 39196
ASZ73876.1 MF668281_p39 hypothetical protein phrog_3693 unknown function unknown function -1 31143 31307
ASZ73835.1 MF668281_p60 hypothetical protein phrog_4657 unknown function unknown function 1 41013 41621
ASZ73843.1 MF668281_p70 hypothetical protein phrog_6650 unknown function unknown function 1 45188 45583
ASZ73871.1 MF668281_p99 hypothetical protein phrog_2057 unknown function unknown function 1 54839 55000
ASZ73783.1 MF668281_p7 head-to-tail connector protein phrog_2377 head-tail adaptor Ad1 connector 1 5877 6446
ASZ73820.1 MF668281_p45 hypothetical protein phrog_2025 unknown function unknown function 1 35014 35304
ASZ73860.1 MF668281_p88 hypothetical protein phrog_1091 unknown function unknown function 1 51807 51986
ASZ73856.1 MF668281_p84 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision 1 50924 51091
ASZ73791.1 MF668281_p15 minor tail protein phrog_106 minor tail protein tail 1 13155 14864
ASZ73833.1 MF668281_p58 hypothetical protein phrog_5168 unknown function unknown function 1 39578 40042
ASZ73788.1 MF668281_p13 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 8532 9056
ASZ73778.1 MF668281_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 571 2208
ASZ73801.1 MF668281_p25 HTH DNA-binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25317 25514
ASZ73779.1 MF668281_p3 portal protein phrog_104 portal protein head and packaging 1 2239 3609
ASZ73782.1 MF668281_p6 major capsid protein phrog_267 major head protein head and packaging 1 5047 5868
ASZ73817.1 MF668281_p42 hypothetical protein phrog_1948 unknown function unknown function -1 33264 33719
ASZ73867.1 MF668281_p95 hypothetical protein phrog_1694 unknown function unknown function 1 53863 54021
ASZ73805.1 MF668281_p29 hypothetical protein phrog_747 unknown function unknown function 1 26298 26519
ASZ73861.1 MF668281_p89 hypothetical protein phrog_1545 unknown function unknown function 1 51991 52128
ASZ73800.1 MF668281_p24 minor tail protein phrog_754 minor tail protein tail 1 24488 25312
ASZ73803.1 MF668281_p27 hypothetical protein phrog_932 unknown function unknown function 1 25954 26100
ASZ73846.1 MF668281_p73 hypothetical protein phrog_780 unknown function unknown function 1 46813 47040
ASZ73827.1 MF668281_p52 WhiB family transcription factor phrog_1333 unknown function unknown function 1 37583 38077
ASZ73806.1 MF668281_p30 hypothetical protein phrog_5492 unknown function unknown function 1 26516 26689
ASZ73811.1 MF668281_p35 hypothetical protein phrog_2004 unknown function unknown function 1 29606 29839
ASZ73850.1 MF668281_p78 hypothetical protein phrog_6275 unknown function unknown function 1 48948 49328
ASZ73853.1 MF668281_p81 hypothetical protein phrog_1546 unknown function unknown function 1 49650 50375
ASZ73847.1 MF668281_p74 DNA methylase phrog_67 DNA methyltransferase other 1 47037 47705
ASZ73814.1 MF668281_p38 hypothetical protein phrog_1839 unknown function unknown function 1 30948 31040
ASZ73780.1 MF668281_p4 capsid maturation protease phrog_1522 head maturation protease head and packaging 1 3596 4351
ASZ73836.1 MF668281_p61 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 41618 41974
ASZ73795.1 MF668281_p19 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 20088 21977
ASZ73851.1 MF668281_p79 hypothetical protein phrog_1943 unknown function unknown function 1 49328 49522
ASZ73813.1 MF668281_p37 hypothetical protein phrog_1791 unknown function unknown function 1 30665 30955
ASZ73862.1 MF668281_p90 hypothetical protein phrog_2278 unknown function unknown function 1 52241 52477
ASZ73802.1 MF668281_p26 hypothetical protein phrog_411 unknown function unknown function 1 25663 25947
ASZ73859.1 MF668281_p87 hypothetical protein phrog_6625 unknown function unknown function 1 51520 51810
ASZ73877.1 MF668281_p63 hypothetical protein phrog_7789 unknown function unknown function 1 43561 43650
ASZ73844.1 MF668281_p71 DNA methylase phrog_116 DNA methyltransferase other 1 45580 46668
ASZ73799.1 MF668281_p23 minor tail protein phrog_2012 minor tail protein tail 1 23847 24491
ASZ73845.1 MF668281_p72 hypothetical protein phrog_2001 unknown function unknown function 1 46694 46816
ASZ73874.1 MF668281_p102 glycosyltransferase phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 56669 57292
ASZ73863.1 MF668281_p91 hypothetical protein phrog_2247 unknown function unknown function 1 52470 52721
ASZ73870.1 MF668281_p98 hypothetical protein phrog_1385 unknown function unknown function 1 54604 54846
ASZ73784.1 MF668281_p8 head-to-tail connector protein phrog_763 head-tail adaptor connector 1 6443 6772
ASZ73821.1 MF668281_p46 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 35391 35588
ASZ73807.1 MF668281_p31 lysin A phrog_700 endolysin lysis 1 26686 27960
ASZ73866.1 MF668281_p94 hypothetical protein phrog_1869 unknown function unknown function 1 53693 53857
ASZ73798.1 MF668281_p22 minor tail protein phrog_2005 minor tail protein tail 1 23584 23838
ASZ73785.1 MF668281_p9 head-to-tail connector protein phrog_1929 head-tail connector protein connector 1 6779 7105
ASZ73829.1 MF668281_p54 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 38556 38834
ASZ73789.1 MF668281_p12 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 8532 9441
ASZ73822.1 MF668281_p47 hypothetical protein phrog_2021 unknown function unknown function 1 35632 36015
ASZ73816.1 MF668281_p41 integrase phrog_1 integrase integration and excision 1 31885 33186
ASZ73872.1 MF668281_p100 galactosyltransferase phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 55027 56463
ASZ73832.1 MF668281_p57 hypothetical protein phrog_1834 unknown function unknown function 1 39348 39581
ASZ73839.1 MF668281_p66 hypothetical protein phrog_2704 unknown function unknown function 1 44096 44245
ASZ73793.1 MF668281_p17 minor tail protein phrog_732 minor tail protein tail 1 16694 17542
ASZ73815.1 MF668281_p40 hypothetical protein phrog_2437 unknown function unknown function -1 31289 31489
ASZ73810.1 MF668281_p34 hypothetical protein phrog_404 minor tail protein tail 1 29207 29581
ASZ73873.1 MF668281_p101 hypothetical protein phrog_1693 unknown function unknown function 1 56466 56672
ASZ73875.1 MF668281_p103 HNH endonuclease phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 57292 57618
ASZ73792.1 MF668281_p16 minor tail protein phrog_110 minor tail protein tail 1 14948 16657
ASZ73837.1 MF668281_p62 DNA methylase phrog_67 DNA methyltransferase other 1 41971 43485
ASZ73819.1 MF668281_p44 CRO protein phrog_3 transcriptional repressor transcription regulation 1 34721 34954
ASZ73812.1 MF668281_p36 DnaQ-like exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29826 30647
ASZ73790.1 MF668281_p14 tape measure protein phrog_1942 tail length tape measure protein tail 1 9438 13154
ASZ73804.1 MF668281_p28 hypothetical protein phrog_1172 unknown function unknown function 1 26097 26231
ASZ73858.1 MF668281_p86 hypothetical protein phrog_1901 unknown function unknown function 1 51353 51547
ASZ73849.1 MF668281_p77 hypothetical protein phrog_2080 unknown function unknown function 1 48688 48951
ASZ73852.1 MF668281_p80 hypothetical protein phrog_9840 unknown function unknown function 1 49519 49650
ASZ73865.1 MF668281_p93 MerR-like HTH DNA binding domain protein phrog_2474 MerR-like transcriptional regulator transcription regulation 1 53472 53696
ASZ73826.1 MF668281_p51 hypothetical protein phrog_658 unknown function unknown function 1 37236 37583
ASZ73864.1 MF668281_p92 hypothetical protein phrog_1467 unknown function unknown function 1 52718 53362
ASZ73777.1 MF668281_p1 terminase small subunit phrog_226 minor tail protein tail 1 108 563
ASZ73841.1 MF668281_p68 hypothetical protein phrog_1311 unknown function unknown function 1 44390 44545