Genomic map of Gordonia phage ShayRa (MF668282)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF668282
Definition
Gordonia phage ShayRa, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Soupsvirus; unclassified Soupsvirus.
DB of origin
NUCCORE
Length
51238
Host Name
Gordonia terrae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
97
%GC
62.05
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASZ73914.1 MF668282_p35 dsDNA partitioning protein phrog_2639 Arc-like repressor transcription regulation 1 25360 25674
ASZ73940.1 MF668282_p61 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 37358 37627
ASZ73909.1 MF668282_p30 minor tail protein phrog_404 minor tail protein tail 1 21527 21868
ASZ73900.1 MF668282_p21 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 13538 13906
ASZ73966.1 MF668282_p87 hypothetical protein phrog_14026 unknown function unknown function -1 46663 46830
ASZ73933.1 MF668282_p54 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism -1 32881 34944
ASZ73890.1 MF668282_p11 holin phrog_13682 holin lysis 1 6565 6792
ASZ73964.1 MF668282_p85 hypothetical protein phrog_12613 unknown function unknown function -1 46262 46432
ASZ73905.1 MF668282_p26 tape measure protein phrog_305 tail length tape measure protein tail 1 16045 18231
ASZ73926.1 MF668282_p47 hypothetical protein phrog_13814 transcriptional regulator transcription regulation -1 30304 30540
ASZ73889.1 MF668282_p10 lysin A phrog_2998 endolysin lysis 1 5514 6554
ASZ73880.1 MF668282_p1 DNA binding protein singleton unknown function unknown function 1 438 590
ASZ73885.1 MF668282_p6 terminase small subunit phrog_226 minor tail protein tail 1 2757 3212
ASZ73886.1 MF668282_p7 tail protein phrog_1126 unknown function unknown function 1 3229 3564
ASZ73925.1 MF668282_p46 hypothetical protein phrog_762 unknown function unknown function -1 29945 30304
ASZ73960.1 MF668282_p81 hypothetical protein phrog_14317 unknown function unknown function -1 44942 45214
ASZ73894.1 MF668282_p15 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 10872 11384
ASZ73968.1 MF668282_p89 hypothetical protein phrog_9204 unknown function unknown function -1 47127 47246
ASZ73973.1 MF668282_p94 hypothetical protein phrog_14166 unknown function unknown function -1 48825 49055
ASZ73932.1 MF668282_p53 membrane protein phrog_13800 membrane protein moron, auxiliary metabolic gene and host takeover -1 32783 32896
ASZ73972.1 MF668282_p93 hypothetical protein phrog_9027 unknown function unknown function -1 48625 48822
ASZ73883.1 MF668282_p4 hypothetical protein phrog_4491 unknown function unknown function 1 2129 2428
ASZ73920.1 MF668282_p41 hypothetical protein phrog_13673 unknown function unknown function -1 26990 27223
ASZ73921.1 MF668282_p42 hypothetical protein phrog_3771 unknown function unknown function -1 27216 27464
ASZ73937.1 MF668282_p58 phosphoesterase phrog_221 metallo-phosphoesterase other -1 35993 36757
ASZ73976.1 MF668282_p97 hypothetical protein phrog_13265 unknown function unknown function -1 49458 49742
ASZ73899.1 MF668282_p20 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 13170 13538
ASZ73947.1 MF668282_p68 membrane protein phrog_13833 membrane protein moron, auxiliary metabolic gene and host takeover -1 39955 40068
ASZ73948.1 MF668282_p69 membrane protein phrog_14261 membrane protein moron, auxiliary metabolic gene and host takeover -1 40065 40163
ASZ73896.1 MF668282_p17 head-to-tail connector protein phrog_748 head-tail connector protein connector 1 12438 12608
ASZ73967.1 MF668282_p88 hypothetical protein phrog_1946 unknown function unknown function -1 46885 47127
ASZ73881.1 MF668282_p2 hypothetical protein phrog_940 nuclease DNA, RNA and nucleotide metabolism 1 577 1407
ASZ73906.1 MF668282_p27 minor tail protein phrog_106 minor tail protein tail 1 18241 19218
ASZ73953.1 MF668282_p74 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 41777 42607
ASZ73882.1 MF668282_p3 VIP2-like toxin phrog_3895 ADP-ribosyltransferase exoenzyme toxin moron, auxiliary metabolic gene and host takeover 1 1245 2132
ASZ73907.1 MF668282_p28 minor tail protein phrog_110 minor tail protein tail 1 19215 21002
ASZ73942.1 MF668282_p63 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 37833 38447
ASZ73969.1 MF668282_p90 hypothetical protein phrog_13953 unknown function unknown function -1 47243 47656
ASZ73884.1 MF668282_p5 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2425 2721
ASZ73903.1 MF668282_p25 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 15070 15453
ASZ73956.1 MF668282_p77 helix-turn-helix DNA binding domain protein phrog_520 unknown function unknown function -1 43047 43325
ASZ73924.1 MF668282_p45 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 28154 29944
ASZ73961.1 MF668282_p82 protease phrog_1006 unknown function unknown function -1 45211 45678
ASZ73952.1 MF668282_p73 hypothetical protein phrog_13179 unknown function unknown function -1 41246 41734
ASZ73902.1 MF668282_p23 major tail protein phrog_117 major tail protein tail 1 14354 14956
ASZ73911.1 MF668282_p32 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism 1 23657 24013
ASZ73935.1 MF668282_p56 hypothetical protein phrog_499 unknown function unknown function -1 35129 35311
ASZ73945.1 MF668282_p66 lysin B phrog_6187 unknown function unknown function -1 38881 39516
ASZ73893.1 MF668282_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 9959 10819
ASZ73955.1 MF668282_p76 hypothetical protein phrog_10900 unknown function unknown function -1 42856 43050
ASZ73892.1 MF668282_p13 portal protein phrog_104 portal protein head and packaging 1 8502 9962
ASZ73908.1 MF668282_p29 minor tail protein phrog_352 minor tail protein tail 1 21087 21530
ASZ73946.1 MF668282_p67 endonuclease VII phrog_2914 endonuclease VII DNA, RNA and nucleotide metabolism -1 39513 39881
ASZ73904.1 MF668282_p24 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 15070 15974
ASZ73944.1 MF668282_p65 hypothetical protein phrog_13497 unknown function unknown function -1 38702 38881
ASZ73936.1 MF668282_p57 HTH DNA binding domain protein phrog_354 sigma-K factor transcription regulation -1 35295 35867
ASZ73915.1 MF668282_p36 membrane protein phrog_1039 immunity to superinfection moron, auxiliary metabolic gene and host takeover 1 25726 25965
ASZ73922.1 MF668282_p43 hypothetical protein phrog_13791 unknown function unknown function -1 27464 27688
ASZ73949.1 MF668282_p70 hypothetical protein phrog_478 site-specific recombination directionality factor RDF integration and excision -1 40206 40604
ASZ73895.1 MF668282_p16 major capsid protein phrog_10 major head protein head and packaging 1 11417 12367
ASZ73916.1 MF668282_p37 hypothetical protein phrog_11556 unknown function unknown function 1 25962 26144
ASZ73970.1 MF668282_p91 hypothetical protein phrog_2554 unknown function unknown function -1 47687 48415
ASZ73917.1 MF668282_p38 hypothetical protein phrog_25843 unknown function unknown function -1 26294 26470
ASZ73962.1 MF668282_p83 hypothetical protein phrog_12580 unknown function unknown function -1 45793 46074
ASZ73927.1 MF668282_p48 HTH DNA binding protein phrog_517 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 30537 30830
ASZ73941.1 MF668282_p62 hypothetical protein phrog_13334 unknown function unknown function -1 37624 37836
ASZ73898.1 MF668282_p19 head-to-tail connector protein phrog_830 head-tail connector protein connector 1 12986 13183
ASZ73888.1 MF668282_p9 tail protein phrog_356 minor tail protein tail 1 4550 5224
ASZ73951.1 MF668282_p72 hypothetical protein phrog_762 unknown function unknown function -1 40797 41213
ASZ73887.1 MF668282_p8 tail protein phrog_1197 tail protein tail 1 3561 4553
ASZ73912.1 MF668282_p33 hypothetical protein phrog_4480 unknown function unknown function 1 24010 24318
ASZ73901.1 MF668282_p22 head-to-tail connector protein phrog_123 tail terminator connector 1 13919 14329
ASZ73931.1 MF668282_p52 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 32223 32786
ASZ73923.1 MF668282_p44 hypothetical protein phrog_16184 unknown function unknown function -1 27685 28140
ASZ73974.1 MF668282_p95 hypothetical protein phrog_13636 unknown function unknown function -1 49058 49243
ASZ73934.1 MF668282_p55 hypothetical protein phrog_2046 unknown function unknown function -1 34941 35132
ASZ73943.1 MF668282_p64 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 38296 38676
ASZ73958.1 MF668282_p79 RecB-like recombinase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 43753 44601
ASZ73938.1 MF668282_p59 hypothetical protein phrog_2387 nucleotide kinase other -1 36754 37188
ASZ73919.1 MF668282_p40 hypothetical protein phrog_14604 unknown function unknown function -1 26856 26990
ASZ73950.1 MF668282_p71 membrane protein phrog_1374 unknown function unknown function -1 40615 40794
ASZ73971.1 MF668282_p92 hypothetical protein phrog_18197 unknown function unknown function -1 48405 48548
ASZ73957.1 MF668282_p78 HNH endonuclease phrog_4160 unknown function unknown function -1 43352 43741
ASZ73963.1 MF668282_p84 hypothetical protein phrog_9830 unknown function unknown function -1 46077 46262
ASZ73954.1 MF668282_p75 hypothetical protein phrog_9751 unknown function unknown function -1 42672 42845
ASZ73965.1 MF668282_p86 hypothetical protein phrog_15584 unknown function unknown function -1 46478 46660
ASZ73918.1 MF668282_p39 hypothetical protein phrog_383 unknown function unknown function -1 26467 26856
ASZ73929.1 MF668282_p50 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 31066 31764
ASZ73939.1 MF668282_p60 hypothetical protein phrog_4589 unknown function unknown function -1 37185 37361
ASZ73928.1 MF668282_p49 hypothetical protein phrog_690 unknown function unknown function -1 30827 31057
ASZ73975.1 MF668282_p96 hypothetical protein phrog_7225 unknown function unknown function -1 49245 49454
ASZ73891.1 MF668282_p12 terminase large subunit phrog_9 terminase large subunit head and packaging 1 6808 8505
ASZ73897.1 MF668282_p18 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 12612 12989
ASZ73913.1 MF668282_p34 dsDNA partitioning protein phrog_164 ParA-like partition protein DNA, RNA and nucleotide metabolism 1 24801 25367
ASZ73959.1 MF668282_p80 hypothetical protein phrog_13943 unknown function unknown function -1 44710 44958
ASZ73910.1 MF668282_p31 minor tail protein phrog_2689 minor tail protein tail 1 21865 23577
ASZ73930.1 MF668282_p51 nucleotide pyrophosphohydrolase phrog_229 MazG-like pyrophosphatase other -1 31761 32105