Genomic map of Mycobacterium phage Smairt (MF668283)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF668283
Definition
Mycobacterium phage Smairt, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus.
DB of origin
NUCCORE
Length
54655
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
100
%GC
63.55
Number of singletons
2
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ASZ74032.1 MF668283_p65 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism -1 43635 44444
ASZ74071.1 MF668283_p60 hypothetical protein phrog_1783 unknown function unknown function -1 41195 41359
ASZ74023.1 MF668283_p52 hypothetical protein phrog_1782 site-specific recombination directionality factor RDF integration and excision -1 37155 37295
ASZ73988.1 MF668283_p13 portal protein phrog_104 portal protein head and packaging 1 9129 10571
ASZ74070.1 MF668283_p45 hypothetical protein phrog_383 unknown function unknown function -1 32797 33153
ASZ74018.1 MF668283_p47 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 33637 35424
ASZ74016.1 MF668283_p44 hypothetical protein phrog_9480 unknown function unknown function -1 32504 32800
ASZ74038.1 MF668283_p71 hypothetical protein phrog_13492 unknown function unknown function -1 46125 46376
ASZ74067.1 MF668283_p92 hypothetical protein phrog_17684 unknown function unknown function -1 51913 52026
ASZ74069.1 MF668283_p38 integrase phrog_95 integrase integration and excision 1 29608 31107
ASZ74019.1 MF668283_p48 hypothetical protein phrog_1781 unknown function unknown function -1 35461 35691
ASZ73989.1 MF668283_p14 capsid maturation protease phrog_193 head maturation protease head and packaging 1 10568 11449
ASZ74003.1 MF668283_p28 minor tail protein phrog_110 minor tail protein tail 1 21861 23663
ASZ74044.1 MF668283_p79 immunity repressor phrog_357 transcriptional repressor transcription regulation -1 48602 49288
ASZ73995.1 MF668283_p20 head-to-tail connector protein phrog_321 tail completion or Neck1 protein connector 1 14470 14865
ASZ74020.1 MF668283_p49 hypothetical protein phrog_364 ribonucleoside reductase class II DNA, RNA and nucleotide metabolism -1 35722 36201
ASZ74045.1 MF668283_p80 hypothetical protein phrog_439 site-specific recombination directionality factor RDF integration and excision -1 49389 49688
ASZ74041.1 MF668283_p74 helix-turn-helix DNA binding domain protein phrog_11473 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 46837 47319
ASZ74030.1 MF668283_p62 DNA methylase phrog_67 DNA methyltransferase other -1 41627 42808
ASZ74015.1 MF668283_p43 hypothetical protein phrog_1860 unknown function unknown function -1 32412 32507
ASZ74039.1 MF668283_p72 hypothetical protein phrog_12594 unknown function unknown function -1 46373 46540
ASZ74026.1 MF668283_p55 hypothetical protein phrog_474 phosphofructokinase other -1 39191 39592
ASZ73987.1 MF668283_p12 terminase large subunit phrog_9 terminase large subunit head and packaging 1 7444 9132
ASZ74033.1 MF668283_p66 hypothetical protein phrog_1705 unknown function unknown function -1 44431 44577
ASZ74001.1 MF668283_p26 minor tail protein phrog_106 minor tail protein tail 1 19603 21660
ASZ74073.1 MF668283_p78 hypothetical protein phrog_1809 unknown function unknown function -1 48161 48556
ASZ74066.1 MF668283_p75 zinc finger domain protein phrog_14169 zinc-finger domain protein other -1 47309 47536
ASZ74012.1 MF668283_p40 hypothetical protein phrog_2387 nucleotide kinase other -1 31497 31886
ASZ73991.1 MF668283_p16 major capsid protein phrog_10 major head protein head and packaging 1 12031 13050
ASZ74050.1 MF668283_p86 hypothetical protein phrog_1155 unknown function unknown function -1 50734 50922
ASZ74013.1 MF668283_p41 hypothetical protein phrog_722 unknown function unknown function -1 31883 32245
ASZ74057.1 MF668283_p95 hypothetical protein phrog_2212 unknown function unknown function -1 52686 52805
ASZ73996.1 MF668283_p21 head-to-tail connector protein phrog_123 tail terminator connector 1 14869 15315
ASZ74063.1 MF668283_p98 hypothetical protein phrog_17708 unknown function unknown function 1 53414 53575
ASZ73980.1 MF668283_p4 hypothetical protein phrog_18747 unknown function unknown function 1 2007 2321
ASZ74074.1 MF668283_p81 hypothetical protein phrog_6474 recombination directionality factor integration and excision -1 49681 49860
ASZ74053.1 MF668283_p90 hypothetical protein phrog_932 unknown function unknown function -1 51536 51685
ASZ73982.1 MF668283_p7 hypothetical protein phrog_553 minor tail protein tail 1 3793 4494
ASZ74022.1 MF668283_p51 RNA polymerase sigma factor phrog_354 sigma-K factor transcription regulation -1 36377 37162
ASZ73985.1 MF668283_p10 lysin A phrog_317 endolysin lysis 1 5033 6466
ASZ74037.1 MF668283_p70 exonuclease/helicase phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 45325 46125
ASZ73990.1 MF668283_p15 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 11508 12020
ASZ73986.1 MF668283_p11 lysin B phrog_102 endolysin lysis 1 6456 7424
ASZ74010.1 MF668283_p37 hypothetical protein phrog_553 minor tail protein tail 1 28913 29458
ASZ74061.1 MF668283_p5 hypothetical protein singleton unknown function unknown function 1 2391 2522
ASZ74055.1 MF668283_p93 hypothetical protein phrog_5017 unknown function unknown function -1 52124 52471
ASZ74006.1 MF668283_p32 minor tail protein phrog_346 minor tail protein tail 1 24813 26666
ASZ74021.1 MF668283_p50 hypothetical protein phrog_499 unknown function unknown function -1 36198 36380
ASZ73984.1 MF668283_p9 hypothetical protein phrog_747 unknown function unknown function 1 4776 5033
ASZ74025.1 MF668283_p54 hypothetical protein phrog_1503 unknown function unknown function -1 39015 39194
ASZ74034.1 MF668283_p67 hypothetical protein phrog_780 unknown function unknown function -1 44574 44819
ASZ74075.1 MF668283_p87 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 50922 51089
ASZ74072.1 MF668283_p64 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 43369 43635
ASZ74060.1 MF668283_p100 hypothetical protein phrog_15028 unknown function unknown function 1 53962 54558
ASZ73998.1 MF668283_p24 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 16297 16674
ASZ73993.1 MF668283_p18 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 13659 14108
ASZ74049.1 MF668283_p85 hypothetical protein phrog_3447 unknown function unknown function -1 50525 50737
ASZ74007.1 MF668283_p33 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 26659 28140
ASZ74054.1 MF668283_p91 hypothetical protein phrog_17848 unknown function unknown function -1 51682 51852
ASZ73981.1 MF668283_p6 tail protein phrog_1197 tail protein tail 1 2713 3783
ASZ74059.1 MF668283_p97 hypothetical protein phrog_828 unknown function unknown function 1 53160 53366
ASZ74031.1 MF668283_p63 endonuclease VII phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism -1 42805 43299
ASZ73978.1 MF668283_p2 HNH endonuclease phrog_826 HNH endonuclease DNA, RNA and nucleotide metabolism 1 926 1435
ASZ74002.1 MF668283_p27 hypothetical protein phrog_1543 minor tail protein tail 1 21679 21861
ASZ74011.1 MF668283_p39 hypothetical protein phrog_1966 unknown function unknown function -1 31228 31500
ASZ74062.1 MF668283_p36 hypothetical protein singleton unknown function unknown function 1 28771 29358
ASZ73994.1 MF668283_p19 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 14108 14470
ASZ74048.1 MF668283_p84 hypothetical protein phrog_1387 unknown function unknown function -1 50325 50528
ASZ74046.1 MF668283_p82 hypothetical protein phrog_26295 unknown function unknown function -1 49868 50062
ASZ74052.1 MF668283_p89 hypothetical protein phrog_8345 unknown function unknown function -1 51310 51516
ASZ73999.1 MF668283_p23 tail assembly chaperone phrog_393 tail assembly chaperone tail 1 16297 17096
ASZ74043.1 MF668283_p77 hypothetical protein phrog_3851 unknown function unknown function -1 47847 48164
ASZ74051.1 MF668283_p88 hypothetical protein phrog_11336 HNH endonuclease DNA, RNA and nucleotide metabolism -1 51119 51313
ASZ74029.1 MF668283_p61 hypothetical protein phrog_397 unknown function unknown function -1 41421 41555
ASZ73997.1 MF668283_p22 major tail protein phrog_117 major tail protein tail 1 15324 16175
ASZ74058.1 MF668283_p96 hypothetical protein phrog_2985 unknown function unknown function 1 52921 53076
ASZ73992.1 MF668283_p17 head-to-tail connector protein phrog_1857 head-tail connector protein connector 1 13129 13659
ASZ74047.1 MF668283_p83 hypothetical protein phrog_1720 unknown function unknown function -1 50059 50328
ASZ74064.1 MF668283_p58 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism -1 40282 40827
ASZ74040.1 MF668283_p73 hypothetical protein phrog_12774 unknown function unknown function -1 46552 46824
ASZ73983.1 MF668283_p8 hypothetical protein phrog_1718 tail protein tail 1 4508 4768
ASZ74036.1 MF668283_p69 DNA binding protein phrog_1763 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 45116 45298
ASZ74027.1 MF668283_p56 hypothetical protein phrog_5618 unknown function unknown function -1 39589 39915
ASZ73977.1 MF668283_p1 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 595 891
ASZ74014.1 MF668283_p42 hypothetical protein phrog_2035 unknown function unknown function -1 32245 32415
ASZ73979.1 MF668283_p3 hypothetical protein phrog_226 minor tail protein tail 1 1435 1875
ASZ74076.1 MF668283_p99 hypothetical protein phrog_3574 unknown function unknown function 1 53679 53867
ASZ74068.1 MF668283_p30 hypothetical protein phrog_981 minor tail protein tail 1 24159 24491
ASZ74017.1 MF668283_p46 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 33174 33659
ASZ74004.1 MF668283_p29 minor tail protein phrog_352 minor tail protein tail 1 23701 24147
ASZ74009.1 MF668283_p35 hypothetical protein phrog_1560 unknown function unknown function 1 28562 28771
ASZ74024.1 MF668283_p53 phosphoesterase phrog_221 metallo-phosphoesterase other -1 37300 39018
ASZ74000.1 MF668283_p25 tape measure protein phrog_305 tail length tape measure protein tail 1 17108 19579
ASZ74042.1 MF668283_p76 hypothetical protein phrog_1584 unknown function unknown function -1 47533 47850
ASZ74056.1 MF668283_p94 hypothetical protein phrog_5533 unknown function unknown function -1 52471 52689
ASZ74065.1 MF668283_p59 hypothetical protein phrog_4160 unknown function unknown function -1 40752 41216
ASZ74028.1 MF668283_p57 DNA primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism -1 39912 40436
ASZ74005.1 MF668283_p31 hypothetical protein phrog_1397 unknown function unknown function 1 24488 24787
ASZ74035.1 MF668283_p68 hypothetical protein phrog_520 unknown function unknown function -1 44819 45112
ASZ74008.1 MF668283_p34 hypothetical protein phrog_644 unknown function unknown function 1 28184 28552