| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF668288 |
Definition |
Mycobacterium phage Wiks, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
52122 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
100 |
%GC |
61.52 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ASZ74565.1 | MF668288_p91 | hypothetical protein | phrog_2001 | unknown function | unknown function | -1 | 48606 | 48698 |
| ASZ74508.1 | MF668288_p33 | dsDNA partitioning protein | phrog_164 | ParA-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 24883 | 25425 |
| ASZ74496.1 | MF668288_p21 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 14393 | 14746 |
| ASZ74551.1 | MF668288_p77 | hypothetical protein | phrog_5531 | unknown function | unknown function | -1 | 44706 | 44915 |
| ASZ74536.1 | MF668288_p62 | hypothetical protein | phrog_3369 | unknown function | unknown function | -1 | 38804 | 38953 |
| ASZ74521.1 | MF668288_p46 | hypothetical protein | phrog_690 | unknown function | unknown function | -1 | 30932 | 31138 |
| ASZ74489.1 | MF668288_p14 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10728 | 11612 |
| ASZ74569.1 | MF668288_p95 | hypothetical protein | phrog_6665 | unknown function | unknown function | -1 | 49190 | 49303 |
| ASZ74515.1 | MF668288_p40 | hypothetical protein | phrog_896 | unknown function | unknown function | -1 | 27340 | 27540 |
| ASZ74478.1 | MF668288_p3 | hypothetical protein | phrog_4347 | unknown function | unknown function | 1 | 1925 | 2146 |
| ASZ74532.1 | MF668288_p57 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37201 | 37833 |
| ASZ74542.1 | MF668288_p68 | hypothetical protein | phrog_2731 | unknown function | unknown function | -1 | 41088 | 41225 |
| ASZ74501.1 | MF668288_p26 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16715 | 18931 |
| ASZ74562.1 | MF668288_p88 | hypothetical protein | phrog_3256 | unknown function | unknown function | -1 | 47656 | 48009 |
| ASZ74559.1 | MF668288_p85 | membrane protein | phrog_828 | unknown function | unknown function | -1 | 46421 | 46663 |
| ASZ74479.1 | MF668288_p4 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2143 | 2439 |
| ASZ74541.1 | MF668288_p67 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 40269 | 41015 |
| ASZ74564.1 | MF668288_p90 | hypothetical protein | phrog_5098 | unknown function | unknown function | -1 | 48412 | 48609 |
| ASZ74557.1 | MF668288_p83 | hypothetical protein | phrog_855 | unknown function | unknown function | -1 | 46120 | 46263 |
| ASZ74566.1 | MF668288_p92 | hypothetical protein | phrog_1946 | unknown function | unknown function | -1 | 48695 | 48898 |
| ASZ74549.1 | MF668288_p75 | hypothetical protein | phrog_1173 | unknown function | unknown function | -1 | 44208 | 44360 |
| ASZ74483.1 | MF668288_p8 | minor tail protein | phrog_356 | minor tail protein | tail | 1 | 4661 | 5359 |
| ASZ74487.1 | MF668288_p12 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 7514 | 9268 |
| ASZ74554.1 | MF668288_p80 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 45309 | 45572 |
| ASZ74550.1 | MF668288_p76 | hypothetical protein | phrog_3236 | unknown function | unknown function | -1 | 44365 | 44706 |
| ASZ74567.1 | MF668288_p93 | hypothetical protein | phrog_519 | unknown function | unknown function | -1 | 48898 | 49065 |
| ASZ74543.1 | MF668288_p69 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 41222 | 41479 |
| ASZ74518.1 | MF668288_p43 | hypothetical protein | phrog_2094 | unknown function | unknown function | -1 | 29615 | 29953 |
| ASZ74563.1 | MF668288_p89 | hypothetical protein | phrog_586 | unknown function | unknown function | -1 | 48035 | 48415 |
| ASZ74519.1 | MF668288_p44 | RNA ligase | phrog_548 | RNA ligase | DNA, RNA and nucleotide metabolism | -1 | 29953 | 30504 |
| ASZ74517.1 | MF668288_p42 | hypothetical protein | phrog_3812 | unknown function | unknown function | -1 | 29430 | 29618 |
| ASZ74523.1 | MF668288_p48 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 31995 | 32558 |
| ASZ74568.1 | MF668288_p94 | hypothetical protein | phrog_2124 | unknown function | unknown function | -1 | 49062 | 49190 |
| ASZ74509.1 | MF668288_p34 | dsDNA partitioning protein | phrog_2639 | Arc-like repressor | transcription regulation | 1 | 25418 | 25693 |
| ASZ74556.1 | MF668288_p82 | protease | phrog_1006 | unknown function | unknown function | -1 | 45655 | 46116 |
| ASZ74491.1 | MF668288_p16 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 12216 | 13187 |
| ASZ74514.1 | MF668288_p39 | hypothetical protein | phrog_4371 | unknown function | unknown function | -1 | 27086 | 27343 |
| ASZ74524.1 | MF668288_p49 | HNH endonuclease | phrog_1872 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 32555 | 32857 |
| ASZ74513.1 | MF668288_p38 | hypothetical protein | phrog_2099 | unknown function | unknown function | -1 | 26787 | 27089 |
| ASZ74571.1 | MF668288_p97 | hypothetical protein | phrog_1392 | unknown function | unknown function | -1 | 49511 | 50221 |
| ASZ74527.1 | MF668288_p52 | hypothetical protein | phrog_5870 | unknown function | unknown function | -1 | 35084 | 35224 |
| ASZ74511.1 | MF668288_p36 | deoxycytidylate deaminase | phrog_174 | dCMP deaminase | DNA, RNA and nucleotide metabolism | -1 | 25997 | 26386 |
| ASZ74545.1 | MF668288_p71 | membrane protein | phrog_6023 | unknown function | unknown function | -1 | 41781 | 42155 |
| ASZ74531.1 | MF668288_p56 | hypothetical protein | phrog_2264 | unknown function | unknown function | -1 | 37100 | 37201 |
| ASZ74529.1 | MF668288_p54 | MRE11 double strand break endo/exonuclease | phrog_221 | metallo-phosphoesterase | other | -1 | 35893 | 36663 |
| ASZ74497.1 | MF668288_p22 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 14743 | 15162 |
| ASZ74481.1 | MF668288_p6 | minor tail protein | phrog_1260 | minor tail protein | tail | 1 | 3037 | 3999 |
| ASZ74525.1 | MF668288_p50 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 32854 | 34908 |
| ASZ74488.1 | MF668288_p13 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9265 | 10731 |
| ASZ74485.1 | MF668288_p10 | lysin A | phrog_317 | endolysin | lysis | 1 | 5832 | 7046 |
| ASZ74546.1 | MF668288_p72 | exonuclease/helicase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 42204 | 43025 |
| ASZ74490.1 | MF668288_p15 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11662 | 12183 |
| ASZ74537.1 | MF668288_p63 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 38950 | 39183 |
| ASZ74558.1 | MF668288_p84 | hypothetical protein | phrog_865 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 46260 | 46418 |
| ASZ74520.1 | MF668288_p45 | helix-turn-helix DNA binding domain protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 30504 | 30932 |
| ASZ74526.1 | MF668288_p51 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 34905 | 35087 |
| ASZ74505.1 | MF668288_p30 | minor tail protein | phrog_404 | minor tail protein | tail | 1 | 22208 | 22504 |
| ASZ74502.1 | MF668288_p27 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18958 | 19974 |
| ASZ74504.1 | MF668288_p29 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 21759 | 22211 |
| ASZ74548.1 | MF668288_p74 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 43457 | 43972 |
| ASZ74498.1 | MF668288_p23 | major tail protein | phrog_117 | major tail protein | tail | 1 | 15191 | 15793 |
| ASZ74503.1 | MF668288_p28 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19971 | 21743 |
| ASZ74544.1 | MF668288_p70 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 41476 | 41775 |
| ASZ74575.1 | MF668288_p58 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 37661 | 38050 |
| ASZ74492.1 | MF668288_p17 | head-to-tail connector protein | phrog_748 | head-tail connector protein | connector | 1 | 13260 | 13457 |
| ASZ74510.1 | MF668288_p35 | hypothetical protein | phrog_5261 | unknown function | unknown function | 1 | 25749 | 25910 |
| ASZ74480.1 | MF668288_p5 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 2482 | 2952 |
| ASZ74539.1 | MF668288_p65 | hypothetical protein | phrog_762 | unknown function | unknown function | -1 | 39686 | 40042 |
| ASZ74494.1 | MF668288_p19 | head-to-tail connector protein | phrog_830 | head-tail connector protein | connector | 1 | 13834 | 14025 |
| ASZ74555.1 | MF668288_p81 | membrane protein | phrog_9760 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 45569 | 45658 |
| ASZ74476.1 | MF668288_p1 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 418 | 1176 |
| ASZ74522.1 | MF668288_p47 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 31140 | 31868 |
| ASZ74493.1 | MF668288_p18 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13460 | 13837 |
| ASZ74538.1 | MF668288_p64 | membrane protein | phrog_478 | site-specific recombination directionality factor RDF | integration and excision | -1 | 39303 | 39689 |
| ASZ74484.1 | MF668288_p9 | hypothetical protein | phrog_1087 | unknown function | unknown function | 1 | 5695 | 5832 |
| ASZ74486.1 | MF668288_p11 | holin | phrog_526 | holin | lysis | 1 | 7046 | 7477 |
| ASZ74540.1 | MF668288_p66 | hypothetical protein | phrog_1374 | unknown function | unknown function | -1 | 40057 | 40236 |
| ASZ74547.1 | MF668288_p73 | hypothetical protein | phrog_1562 | unknown function | unknown function | -1 | 43022 | 43408 |
| ASZ74574.1 | MF668288_p100 | hypothetical protein | phrog_1676 | unknown function | unknown function | -1 | 50564 | 50896 |
| ASZ74552.1 | MF668288_p78 | nucleotide pyrophosphohydrolase | phrog_3963 | unknown function | unknown function | -1 | 44912 | 45181 |
| ASZ74534.1 | MF668288_p60 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 38195 | 38695 |
| ASZ74482.1 | MF668288_p7 | minor tail protein | phrog_819 | tail protein | tail | 1 | 3999 | 4664 |
| ASZ74535.1 | MF668288_p61 | membrane protein | phrog_2187 | unknown function | unknown function | -1 | 38667 | 38807 |
| ASZ74561.1 | MF668288_p87 | DNA methylase | phrog_363 | DNA methyltransferase | other | -1 | 47132 | 47659 |
| ASZ74553.1 | MF668288_p79 | hypothetical protein | phrog_1477 | unknown function | unknown function | -1 | 45190 | 45312 |
| ASZ74500.1 | MF668288_p24 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15905 | 16722 |
| ASZ74560.1 | MF668288_p86 | DNA methylase | phrog_1008 | DNA methyltransferase | other | -1 | 46660 | 47310 |
| ASZ74506.1 | MF668288_p31 | minor tail protein | phrog_2683 | minor tail protein | tail | 1 | 22501 | 23922 |
| ASZ74507.1 | MF668288_p32 | hypothetical protein | phrog_2235 | minor tail protein | tail | 1 | 23933 | 24217 |
| ASZ74512.1 | MF668288_p37 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 26383 | 26790 |
| ASZ74533.1 | MF668288_p59 | hypothetical protein | phrog_4886 | unknown function | unknown function | -1 | 38047 | 38202 |
| ASZ74570.1 | MF668288_p96 | hypothetical protein | phrog_3831 | unknown function | unknown function | -1 | 49305 | 49514 |
| ASZ74573.1 | MF668288_p99 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 50451 | 50531 |
| ASZ74528.1 | MF668288_p53 | helix-turn-helix DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 35221 | 35889 |
| ASZ74477.1 | MF668288_p2 | VIP2-like toxin | phrog_4415 | peptidase | other | 1 | 1089 | 1925 |
| ASZ74516.1 | MF668288_p41 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 27581 | 29422 |
| ASZ74572.1 | MF668288_p98 | hypothetical protein | phrog_2499 | unknown function | unknown function | -1 | 50224 | 50421 |
| ASZ74530.1 | MF668288_p55 | hypothetical protein | phrog_1167 | phosphofructokinase | other | -1 | 36660 | 37103 |
| ASZ74499.1 | MF668288_p25 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15905 | 16309 |
| ASZ74495.1 | MF668288_p20 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 14025 | 14393 |