Genomic map of Streptomyces phage Amethyst (MF766044)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF766044
Definition
Streptomyces phage Amethyst, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; unclassified Arequatrovirus.
DB of origin
NUCCORE
Length
49372
Host Name
Streptomyces xanthochromogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
79
%GC
67.22
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATI18663.1 MF766044_p41 hypothetical protein phrog_10412 unknown function unknown function 1 29730 29933
ATI18692.1 MF766044_p72 hypothetical protein phrog_16954 unknown function unknown function -1 45255 45836
ATI18656.1 MF766044_p34 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 26390 26875
ATI18671.1 MF766044_p49 hypothetical protein phrog_15135 unknown function unknown function -1 35178 35426
ATI18676.1 MF766044_p54 hypothetical protein phrog_22014 unknown function unknown function -1 39271 39405
ATI18651.1 MF766044_p29 immunity repressor phrog_3929 transcriptional repressor transcription regulation 1 23241 23708
ATI18690.1 MF766044_p70 hypothetical protein phrog_31321 unknown function unknown function -1 44729 45028
ATI18660.1 MF766044_p38 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism 1 28284 28715
ATI18634.1 MF766044_p12 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 8604 8945
ATI18688.1 MF766044_p68 hypothetical protein phrog_4239 unknown function unknown function -1 43766 44179
ATI18659.1 MF766044_p37 hypothetical protein phrog_4673 unknown function unknown function 1 28135 28287
ATI18632.1 MF766044_p10 major capsid protein phrog_283 major head protein head and packaging 1 7012 8058
ATI18626.1 MF766044_p4 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 1422 1682
ATI18623.1 MF766044_p1 hypothetical protein phrog_4207 unknown function unknown function -1 35 220
ATI18624.1 MF766044_p2 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 650 964
ATI18631.1 MF766044_p9 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 6407 6937
ATI18628.1 MF766044_p6 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2142 3791
ATI18635.1 MF766044_p13 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 8945 9406
ATI18698.1 MF766044_p79 hypothetical protein phrog_11579 unknown function unknown function -1 47976 48371
ATI18674.1 MF766044_p52 hypothetical protein phrog_9533 unknown function unknown function -1 38376 38564
ATI18696.1 MF766044_p77 hypothetical protein phrog_9864 unknown function unknown function -1 47560 47739
ATI18625.1 MF766044_p3 hypothetical protein phrog_3555 unknown function unknown function 1 1195 1425
ATI18682.1 MF766044_p61 hypothetical protein phrog_4024 unknown function unknown function -1 41397 41603
ATI18637.1 MF766044_p15 major tail protein phrog_117 major tail protein tail 1 9916 10656
ATI18630.1 MF766044_p8 hypothetical protein phrog_193 head maturation protease head and packaging 1 5298 6404
ATI18639.1 MF766044_p16 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 10807 11537
ATI18680.1 MF766044_p59 hypothetical protein phrog_3965 unknown function unknown function -1 40607 41110
ATI18700.1 MF766044_p66 hypothetical protein phrog_14620 unknown function unknown function -1 43123 43542
ATI18693.1 MF766044_p73 hypothetical protein phrog_3842 unknown function unknown function -1 45931 46722
ATI18687.1 MF766044_p67 hypothetical protein phrog_3908 unknown function unknown function -1 43539 43769
ATI18689.1 MF766044_p69 hypothetical protein phrog_2355 unknown function unknown function -1 44302 44727
ATI18665.1 MF766044_p43 endonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 30138 31340
ATI18670.1 MF766044_p48 hypothetical protein phrog_10944 unknown function unknown function -1 34942 35181
ATI18638.1 MF766044_p17 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 10807 11148
ATI18633.1 MF766044_p11 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8131 8607
ATI18678.1 MF766044_p56 hypothetical protein phrog_11485 unknown function unknown function -1 39704 40216
ATI18672.1 MF766044_p50 helix-turn-helix DNA binding domain protein phrog_5823 transcriptional regulator transcription regulation -1 35520 36749
ATI18684.1 MF766044_p63 hypothetical protein phrog_3991 unknown function unknown function -1 42170 42442
ATI18669.1 MF766044_p47 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 32641 34839
ATI18636.1 MF766044_p14 hypothetical protein phrog_123 tail terminator connector 1 9406 9903
ATI18654.1 MF766044_p32 hypothetical protein phrog_3912 unknown function unknown function 1 25324 25806
ATI18675.1 MF766044_p53 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 38561 39274
ATI18683.1 MF766044_p62 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other -1 41593 42177
ATI18662.1 MF766044_p40 hypothetical protein phrog_4022 unknown function unknown function 1 29395 29733
ATI18666.1 MF766044_p44 hypothetical protein phrog_1340 unknown function unknown function 1 31337 31699
ATI18695.1 MF766044_p75 hypothetical protein phrog_12223 unknown function unknown function -1 46914 47045
ATI18646.1 MF766044_p24 minor tail protein phrog_988 tail protein tail 1 19937 21211
ATI18653.1 MF766044_p31 exonuclease phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 24241 25203
ATI18629.1 MF766044_p7 portal protein phrog_104 portal protein head and packaging 1 3826 5301
ATI18697.1 MF766044_p78 hypothetical protein phrog_20053 unknown function unknown function -1 47742 47975
ATI18627.1 MF766044_p5 hypothetical protein phrog_226 minor tail protein tail 1 1696 2130
ATI18681.1 MF766044_p60 hypothetical protein phrog_19723 unknown function unknown function -1 41107 41400
ATI18685.1 MF766044_p64 hypothetical protein phrog_13837 unknown function unknown function -1 42439 42756
ATI18668.1 MF766044_p46 hypothetical protein phrog_4123 unknown function unknown function 1 32076 32564
ATI18661.1 MF766044_p39 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 28730 29392
ATI18650.1 MF766044_p28 hypothetical protein phrog_4061 unknown function unknown function -1 22789 23127
ATI18677.1 MF766044_p55 hypothetical protein phrog_4071 unknown function unknown function -1 39398 39703
ATI18655.1 MF766044_p33 hypothetical protein phrog_1288 unknown function unknown function 1 25879 26316
ATI18641.1 MF766044_p19 minor tail protein phrog_33 distal tail protein Dit tail 1 15455 16312
ATI18701.1 MF766044_p76 hypothetical protein phrog_2563 unknown function unknown function -1 47093 47476
ATI18664.1 MF766044_p42 hypothetical protein phrog_3979 unknown function unknown function 1 29984 30145
ATI18658.1 MF766044_p36 holliday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27761 28138
ATI18649.1 MF766044_p27 hypothetical protein phrog_4092 unknown function unknown function 1 22528 22740
ATI18642.1 MF766044_p20 minor tail protein phrog_538 minor tail protein tail 1 16313 17527
ATI18652.1 MF766044_p30 hypothetical protein phrog_5250 unknown function unknown function 1 23945 24244
ATI18686.1 MF766044_p65 hypothetical protein phrog_3994 unknown function unknown function -1 42858 43154
ATI18694.1 MF766044_p74 hypothetical protein singleton unknown function unknown function -1 46706 46810
ATI18691.1 MF766044_p71 hypothetical protein phrog_4275 unknown function unknown function -1 45028 45168
ATI18643.1 MF766044_p21 hypothetical protein phrog_1276 unknown function unknown function 1 17528 17833
ATI18657.1 MF766044_p35 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 26812 27696
ATI18699.1 MF766044_p57 hypothetical protein phrog_15765 unknown function unknown function -1 40213 40374
ATI18647.1 MF766044_p25 hypothetical protein phrog_3534 unknown function unknown function 1 21208 21561
ATI18645.1 MF766044_p23 hypothetical protein phrog_9468 unknown function unknown function 1 19487 19861
ATI18640.1 MF766044_p18 tape measure protein phrog_305 tail length tape measure protein tail 1 11541 15449
ATI18667.1 MF766044_p45 helix-turn-helix DNA binding domain protein phrog_3512 sigma factor transcription regulation 1 31696 32079
ATI18679.1 MF766044_p58 hypothetical protein phrog_3424 unknown function unknown function -1 40371 40610
ATI18673.1 MF766044_p51 integrase phrog_95 integrase integration and excision 1 36872 38293
ATI18644.1 MF766044_p22 hypothetical protein phrog_4013 unknown function unknown function 1 17833 19476
ATI18648.1 MF766044_p26 lysin phrog_880 endolysin lysis 1 21581 22531