Genomic map of Streptomyces phage SqueakyClean (MF766047)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF766047
Definition
Streptomyces phage SqueakyClean, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Arquatrovirinae; Arequatrovirus; unclassified Arequatrovirus.
DB of origin
NUCCORE
Length
50837
Host Name
Streptomyces xanthochromogenes
Host domain
Bacteria
Is prophage?
undef
Number of proteins
78
%GC
67.02
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATI18884.1 MF766047_p21 minor tail protein phrog_538 minor tail protein tail 1 15829 17040
ATI18875.1 MF766047_p12 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 8473 8961
ATI18910.1 MF766047_p47 ribonucleotide reductase phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 32968 35091
ATI18904.1 MF766047_p41 hypothetical protein phrog_10412 unknown function unknown function 1 30148 30357
ATI18886.1 MF766047_p23 hypothetical protein phrog_4013 unknown function unknown function 1 17343 19529
ATI18865.1 MF766047_p2 helix-turn-helix DNA binding domain protein phrog_9285 unknown function unknown function -1 292 651
ATI18913.1 MF766047_p50 helix-turn-helix DNA binding domain protein phrog_5823 transcriptional regulator transcription regulation -1 35751 36929
ATI18939.1 MF766047_p76 hypothetical protein phrog_2563 unknown function unknown function -1 48630 49007
ATI18933.1 MF766047_p70 hypothetical protein phrog_2355 unknown function unknown function -1 45846 46271
ATI18900.1 MF766047_p37 hypothetical protein phrog_4673 unknown function unknown function 1 28555 28692
ATI18938.1 MF766047_p75 hypothetical protein phrog_20423 unknown function unknown function -1 48390 48584
ATI18897.1 MF766047_p34 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism 1 26829 27302
ATI18879.1 MF766047_p16 major tail protein phrog_117 major tail protein tail 1 10181 10921
ATI18941.1 MF766047_p78 hypothetical protein phrog_11579 unknown function unknown function -1 49371 49760
ATI18891.1 MF766047_p28 hypothetical protein phrog_4092 unknown function unknown function 1 22784 22990
ATI18887.1 MF766047_p24 hypothetical protein phrog_4817 unknown function unknown function 1 19542 20036
ATI18877.1 MF766047_p14 hypothetical protein phrog_321 tail completion or Neck1 protein connector 1 9299 9670
ATI18934.1 MF766047_p71 hypothetical protein phrog_4275 unknown function unknown function -1 46289 46432
ATI18918.1 MF766047_p55 thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 39706 40419
ATI18902.1 MF766047_p39 DNA primase phrog_849 DNA primase DNA, RNA and nucleotide metabolism 1 29137 29796
ATI18876.1 MF766047_p13 head-to-tail connector protein phrog_320 head closure Hc1 connector 1 8958 9299
ATI18928.1 MF766047_p65 hypothetical protein singleton unknown function unknown function -1 43514 43843
ATI18895.1 MF766047_p32 hypothetical protein phrog_3912 unknown function unknown function 1 25751 26233
ATI18871.1 MF766047_p8 portal protein phrog_104 portal protein head and packaging 1 4130 5617
ATI18912.1 MF766047_p49 hypothetical protein phrog_15135 unknown function unknown function -1 35428 35673
ATI18899.1 MF766047_p36 holliday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28181 28558
ATI18896.1 MF766047_p33 hypothetical protein phrog_1288 unknown function unknown function 1 26311 26748
ATI18898.1 MF766047_p35 dsDNA helicase phrog_243 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 27239 28117
ATI18880.1 MF766047_p18 tail assembly chaperone phrog_330 tail assembly chaperone tail 1 11033 11374
ATI18903.1 MF766047_p40 hypothetical protein phrog_4022 unknown function unknown function 1 29801 30151
ATI18878.1 MF766047_p15 hypothetical protein phrog_123 tail terminator connector 1 9670 10167
ATI18935.1 MF766047_p72 hypothetical protein phrog_16954 unknown function unknown function -1 46519 47094
ATI18866.1 MF766047_p3 HNH endonuclease phrog_333 HNH endonuclease DNA, RNA and nucleotide metabolism 1 1027 1341
ATI18885.1 MF766047_p22 hypothetical protein phrog_1276 unknown function unknown function 1 17040 17342
ATI18906.1 MF766047_p43 endonuclease phrog_284 exonuclease DNA, RNA and nucleotide metabolism 1 30580 31779
ATI18894.1 MF766047_p31 exonuclease phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 24658 25632
ATI18870.1 MF766047_p7 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2449 4095
ATI18940.1 MF766047_p77 hypothetical protein phrog_4485 unknown function unknown function -1 49101 49262
ATI18893.1 MF766047_p30 immunity repressor phrog_3929 transcriptional repressor transcription regulation 1 23485 23943
ATI18869.1 MF766047_p6 hypothetical protein phrog_226 minor tail protein tail 1 2000 2431
ATI18882.1 MF766047_p19 tape measure protein phrog_305 tail length tape measure protein tail 1 11767 14964
ATI18867.1 MF766047_p4 hypothetical protein phrog_3555 unknown function unknown function 1 1499 1729
ATI18911.1 MF766047_p48 hypothetical protein phrog_10944 unknown function unknown function -1 35192 35431
ATI18922.1 MF766047_p59 hypothetical protein phrog_3424 unknown function unknown function -1 41334 41591
ATI18932.1 MF766047_p69 hypothetical protein phrog_3908 unknown function unknown function -1 45510 45722
ATI18927.1 MF766047_p64 hypothetical protein phrog_3991 unknown function unknown function -1 43269 43517
ATI18916.1 MF766047_p53 hypothetical protein phrog_29094 unknown function unknown function -1 39402 39512
ATI18889.1 MF766047_p26 hypothetical protein phrog_3534 unknown function unknown function 1 21339 21692
ATI18907.1 MF766047_p44 hypothetical protein phrog_1340 unknown function unknown function 1 31776 32138
ATI18936.1 MF766047_p73 hypothetical protein phrog_3842 unknown function unknown function -1 47191 47904
ATI18901.1 MF766047_p38 DNA primase phrog_360 DNA primase DNA, RNA and nucleotide metabolism 1 28704 29123
ATI18925.1 MF766047_p62 hypothetical protein phrog_4024 unknown function unknown function -1 42484 42687
ATI18937.1 MF766047_p74 hypothetical protein phrog_12223 unknown function unknown function -1 48170 48310
ATI18924.1 MF766047_p61 hypothetical protein phrog_19723 unknown function unknown function -1 42188 42487
ATI18892.1 MF766047_p29 hypothetical protein phrog_4061 unknown function unknown function -1 23040 23387
ATI18931.1 MF766047_p68 hypothetical protein phrog_14620 unknown function unknown function -1 45232 45513
ATI18919.1 MF766047_p56 hypothetical protein phrog_22014 unknown function unknown function -1 40416 40550
ATI18929.1 MF766047_p66 hypothetical protein phrog_421 unknown function unknown function -1 43940 44668
ATI18864.1 MF766047_p1 hypothetical protein phrog_4207 unknown function unknown function -1 74 274
ATI18930.1 MF766047_p67 hypothetical protein phrog_3994 unknown function unknown function -1 44768 45229
ATI18921.1 MF766047_p58 hypothetical protein phrog_11485 unknown function unknown function -1 40849 41337
ATI18905.1 MF766047_p42 hypothetical protein phrog_3979 unknown function unknown function 1 30360 30596
ATI18881.1 MF766047_p17 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 11033 11763
ATI18914.1 MF766047_p51 hypothetical protein phrog_27901 unknown function unknown function 1 37064 37255
ATI18909.1 MF766047_p46 hypothetical protein phrog_4123 unknown function unknown function 1 32512 32886
ATI18926.1 MF766047_p63 dNMP kinase phrog_139 deoxynucleoside monophosphate kinase other -1 42692 43276
ATI18908.1 MF766047_p45 helix-turn-helix DNA binding domain protein phrog_3512 sigma factor transcription regulation 1 32135 32515
ATI18923.1 MF766047_p60 hypothetical protein phrog_3965 unknown function unknown function -1 41581 42081
ATI18873.1 MF766047_p10 scaffolding protein phrog_233 head scaffolding protein head and packaging 1 6741 7274
ATI18872.1 MF766047_p9 hypothetical protein phrog_193 head maturation protease head and packaging 1 5614 6738
ATI18868.1 MF766047_p5 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 1726 1986
ATI18888.1 MF766047_p25 minor tail protein phrog_988 tail protein tail 1 20068 21342
ATI18917.1 MF766047_p54 hypothetical protein phrog_9533 unknown function unknown function -1 39509 39709
ATI18883.1 MF766047_p20 minor tail protein phrog_33 distal tail protein Dit tail 1 14973 15827
ATI18920.1 MF766047_p57 hypothetical protein phrog_4071 unknown function unknown function -1 40543 40848
ATI18915.1 MF766047_p52 integrase phrog_95 integrase integration and excision -1 37301 39307
ATI18890.1 MF766047_p27 lysin phrog_1493 endolysin lysis 1 21711 22787
ATI18874.1 MF766047_p11 major capsid protein phrog_283 major head protein head and packaging 1 7349 8395