Genomic map of Pseudomonas phage SL4 (MF768469)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF768469
Definition
Pseudomonas phage SL4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Bruynoghevirus; unclassified Bruynoghevirus.
DB of origin
NUCCORE
Length
44194
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
63
%GC
52.28
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
AUS03227.1 MF768469_p14 hypothetical protein phrog_221 metallo-phosphoesterase other -1 11379 12140
AUS03230.1 MF768469_p17 5'-3' exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism -1 13293 14177
AUS03255.1 MF768469_p42 hypothetical protein singleton unknown function unknown function -1 29970 30362
AUS03244.1 MF768469_p31 DNA primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism -1 20018 21727
AUS03219.1 MF768469_p6 hypothetical protein phrog_7725 virion structural protein head and packaging 1 4238 5755
AUS03229.1 MF768469_p16 hypothetical protein phrog_7967 unknown function unknown function -1 12335 13318
AUS03235.1 MF768469_p22 hypothetical protein phrog_9754 unknown function unknown function -1 17182 17379
AUS03234.1 MF768469_p21 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 15544 17181
AUS03265.1 MF768469_p52 hypothetical protein phrog_1448 unknown function unknown function -1 32922 33476
AUS03260.1 MF768469_p47 hypothetical protein phrog_11682 unknown function unknown function -1 31309 31455
AUS03246.1 MF768469_p33 hypothetical protein phrog_2520 gamma-glutamyl cyclotransferase moron, auxiliary metabolic gene and host takeover -1 22105 22503
AUS03233.1 MF768469_p20 hypothetical protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 14914 15474
AUS03215.1 MF768469_p2 hypothetical protein phrog_8092 unknown function unknown function 1 1814 2503
AUS03223.1 MF768469_p10 hypothetical protein phrog_12822 unknown function unknown function -1 10386 10613
AUS03264.1 MF768469_p51 hypothetical protein phrog_9596 unknown function unknown function -1 32492 32710
AUS03242.1 MF768469_p29 hypothetical protein phrog_11010 unknown function unknown function -1 19243 19512
AUS03245.1 MF768469_p32 hypothetical protein phrog_8197 unknown function unknown function -1 21728 22105
AUS03239.1 MF768469_p26 hypothetical protein phrog_9555 unknown function unknown function -1 18655 18816
AUS03274.1 MF768469_p61 hypothetical protein phrog_2941 virion structural protein head and packaging 1 42687 43313
AUS03237.1 MF768469_p24 holin phrog_7045 holin lysis -1 17970 18248
AUS03275.1 MF768469_p62 hypothetical protein phrog_402 unknown function unknown function 1 43303 43515
AUS03254.1 MF768469_p41 hypothetical protein phrog_9504 unknown function unknown function -1 28797 29759
AUS03272.1 MF768469_p59 capsid and scaffold protein phrog_1328 major head protein head and packaging 1 41361 42314
AUS03224.1 MF768469_p11 hypothetical protein phrog_8402 unknown function unknown function -1 10758 10964
AUS03252.1 MF768469_p39 hypothetical protein phrog_3815 COOH.NH2 ligase other -1 27022 27822
AUS03241.1 MF768469_p28 hypothetical protein phrog_12255 unknown function unknown function -1 18978 19211
AUS03253.1 MF768469_p40 hypothetical protein phrog_7973 unknown function unknown function -1 27819 28778
AUS03251.1 MF768469_p38 hypothetical protein phrog_4877 unknown function unknown function -1 26460 27029
AUS03240.1 MF768469_p27 hypothetical protein phrog_9813 unknown function unknown function -1 18806 18976
AUS03221.1 MF768469_p8 hypothetical protein phrog_8295 virion structural protein head and packaging 1 9085 9972
AUS03236.1 MF768469_p23 hypothetical protein phrog_7819 tail length tape measure protein tail -1 17384 17839
AUS03222.1 MF768469_p9 hypothetical protein phrog_8259 unknown function unknown function 1 9986 10342
AUS03258.1 MF768469_p45 hypothetical protein phrog_9861 unknown function unknown function -1 30771 31052
AUS03276.1 MF768469_p63 hypothetical protein phrog_8140 unknown function unknown function 1 43499 43747
AUS03218.1 MF768469_p5 hypothetical protein phrog_27875 unknown function unknown function 1 3983 4213
AUS03243.1 MF768469_p30 DNA polymerase phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism -1 19525 20034
AUS03268.1 MF768469_p55 terminase large subunit phrog_2 terminase large subunit head and packaging 1 36537 37985
AUS03266.1 MF768469_p53 hypothetical protein phrog_51 terminase small subunit head and packaging 1 35649 36107
AUS03214.1 MF768469_p1 hypothetical protein phrog_3287 virion structural protein head and packaging 1 276 1817
AUS03273.1 MF768469_p60 hypothetical protein phrog_3982 unknown function unknown function 1 42363 42683
AUS03270.1 MF768469_p57 hypothetical protein phrog_8161 unknown function unknown function 1 40108 40350
AUS03262.1 MF768469_p49 hypothetical protein phrog_12073 unknown function unknown function -1 31993 32139
AUS03256.1 MF768469_p43 hypothetical protein phrog_4955 unknown function unknown function -1 30362 30607
AUS03259.1 MF768469_p46 hypothetical protein phrog_10516 unknown function unknown function -1 31042 31299
AUS03231.1 MF768469_p18 hypothetical protein phrog_8565 unknown function unknown function -1 14177 14407
AUS03232.1 MF768469_p19 hypothetical protein phrog_5033 endolysin; inhibits RNA polymerase lysis -1 14433 14936
AUS03216.1 MF768469_p3 hypothetical protein phrog_7642 unknown function unknown function 1 2500 2934
AUS03271.1 MF768469_p58 capsid and scaffold protein phrog_3927 head scaffolding protein head and packaging 1 40350 41342
AUS03220.1 MF768469_p7 hypothetical protein phrog_6958 virion structural protein head and packaging 1 5906 9073
AUS03225.1 MF768469_p12 hypothetical protein phrog_2251 unknown function unknown function -1 10951 11160
AUS03247.1 MF768469_p34 hypothetical protein phrog_2599 ribosomal protein S6 glutaminyl transferase moron, auxiliary metabolic gene and host takeover -1 22503 23462
AUS03249.1 MF768469_p36 L-glutamine-D-fructose-6-phosphate amidotransferase phrog_4736 L-glutamine-D-fructose-6-phosphate aminotransferase other -1 23765 25297
AUS03217.1 MF768469_p4 hypothetical protein phrog_7477 unknown function unknown function 1 2915 3853
AUS03238.1 MF768469_p25 hypothetical protein phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 18245 18664
AUS03248.1 MF768469_p35 hypothetical protein phrog_9335 unknown function unknown function -1 23534 23755
AUS03250.1 MF768469_p37 hypothetical protein phrog_7631 amidoligase enzyme other -1 25309 26484
AUS03257.1 MF768469_p44 hypothetical protein phrog_8294 unknown function unknown function -1 30604 30771
AUS03263.1 MF768469_p50 hypothetical protein phrog_10887 unknown function unknown function -1 32355 32495
AUS03228.1 MF768469_p15 hypothetical protein phrog_14437 endonuclease DNA, RNA and nucleotide metabolism -1 12133 12372
AUS03269.1 MF768469_p56 portal protein phrog_1216 portal protein head and packaging 1 37985 40105
AUS03267.1 MF768469_p54 baseplate hub protein phrog_7 endolysin lysis 1 36139 36537
AUS03226.1 MF768469_p13 hypothetical protein phrog_9960 unknown function unknown function -1 11164 11382
AUS03261.1 MF768469_p48 hypothetical protein phrog_29615 unknown function unknown function -1 31612 31881