| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF768469 |
Definition |
Pseudomonas phage SL4, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Bruynoghevirus; unclassified Bruynoghevirus. |
DB of origin |
NUCCORE |
Length |
44194 |
Host Name |
Pseudomonas aeruginosa |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
63 |
%GC |
52.28 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| AUS03227.1 | MF768469_p14 | hypothetical protein | phrog_221 | metallo-phosphoesterase | other | -1 | 11379 | 12140 |
| AUS03230.1 | MF768469_p17 | 5'-3' exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 13293 | 14177 |
| AUS03255.1 | MF768469_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29970 | 30362 |
| AUS03244.1 | MF768469_p31 | DNA primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | -1 | 20018 | 21727 |
| AUS03219.1 | MF768469_p6 | hypothetical protein | phrog_7725 | virion structural protein | head and packaging | 1 | 4238 | 5755 |
| AUS03229.1 | MF768469_p16 | hypothetical protein | phrog_7967 | unknown function | unknown function | -1 | 12335 | 13318 |
| AUS03235.1 | MF768469_p22 | hypothetical protein | phrog_9754 | unknown function | unknown function | -1 | 17182 | 17379 |
| AUS03234.1 | MF768469_p21 | DNA polymerase | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 15544 | 17181 |
| AUS03265.1 | MF768469_p52 | hypothetical protein | phrog_1448 | unknown function | unknown function | -1 | 32922 | 33476 |
| AUS03260.1 | MF768469_p47 | hypothetical protein | phrog_11682 | unknown function | unknown function | -1 | 31309 | 31455 |
| AUS03246.1 | MF768469_p33 | hypothetical protein | phrog_2520 | gamma-glutamyl cyclotransferase | moron, auxiliary metabolic gene and host takeover | -1 | 22105 | 22503 |
| AUS03233.1 | MF768469_p20 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 14914 | 15474 |
| AUS03215.1 | MF768469_p2 | hypothetical protein | phrog_8092 | unknown function | unknown function | 1 | 1814 | 2503 |
| AUS03223.1 | MF768469_p10 | hypothetical protein | phrog_12822 | unknown function | unknown function | -1 | 10386 | 10613 |
| AUS03264.1 | MF768469_p51 | hypothetical protein | phrog_9596 | unknown function | unknown function | -1 | 32492 | 32710 |
| AUS03242.1 | MF768469_p29 | hypothetical protein | phrog_11010 | unknown function | unknown function | -1 | 19243 | 19512 |
| AUS03245.1 | MF768469_p32 | hypothetical protein | phrog_8197 | unknown function | unknown function | -1 | 21728 | 22105 |
| AUS03239.1 | MF768469_p26 | hypothetical protein | phrog_9555 | unknown function | unknown function | -1 | 18655 | 18816 |
| AUS03274.1 | MF768469_p61 | hypothetical protein | phrog_2941 | virion structural protein | head and packaging | 1 | 42687 | 43313 |
| AUS03237.1 | MF768469_p24 | holin | phrog_7045 | holin | lysis | -1 | 17970 | 18248 |
| AUS03275.1 | MF768469_p62 | hypothetical protein | phrog_402 | unknown function | unknown function | 1 | 43303 | 43515 |
| AUS03254.1 | MF768469_p41 | hypothetical protein | phrog_9504 | unknown function | unknown function | -1 | 28797 | 29759 |
| AUS03272.1 | MF768469_p59 | capsid and scaffold protein | phrog_1328 | major head protein | head and packaging | 1 | 41361 | 42314 |
| AUS03224.1 | MF768469_p11 | hypothetical protein | phrog_8402 | unknown function | unknown function | -1 | 10758 | 10964 |
| AUS03252.1 | MF768469_p39 | hypothetical protein | phrog_3815 | COOH.NH2 ligase | other | -1 | 27022 | 27822 |
| AUS03241.1 | MF768469_p28 | hypothetical protein | phrog_12255 | unknown function | unknown function | -1 | 18978 | 19211 |
| AUS03253.1 | MF768469_p40 | hypothetical protein | phrog_7973 | unknown function | unknown function | -1 | 27819 | 28778 |
| AUS03251.1 | MF768469_p38 | hypothetical protein | phrog_4877 | unknown function | unknown function | -1 | 26460 | 27029 |
| AUS03240.1 | MF768469_p27 | hypothetical protein | phrog_9813 | unknown function | unknown function | -1 | 18806 | 18976 |
| AUS03221.1 | MF768469_p8 | hypothetical protein | phrog_8295 | virion structural protein | head and packaging | 1 | 9085 | 9972 |
| AUS03236.1 | MF768469_p23 | hypothetical protein | phrog_7819 | tail length tape measure protein | tail | -1 | 17384 | 17839 |
| AUS03222.1 | MF768469_p9 | hypothetical protein | phrog_8259 | unknown function | unknown function | 1 | 9986 | 10342 |
| AUS03258.1 | MF768469_p45 | hypothetical protein | phrog_9861 | unknown function | unknown function | -1 | 30771 | 31052 |
| AUS03276.1 | MF768469_p63 | hypothetical protein | phrog_8140 | unknown function | unknown function | 1 | 43499 | 43747 |
| AUS03218.1 | MF768469_p5 | hypothetical protein | phrog_27875 | unknown function | unknown function | 1 | 3983 | 4213 |
| AUS03243.1 | MF768469_p30 | DNA polymerase | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | -1 | 19525 | 20034 |
| AUS03268.1 | MF768469_p55 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 36537 | 37985 |
| AUS03266.1 | MF768469_p53 | hypothetical protein | phrog_51 | terminase small subunit | head and packaging | 1 | 35649 | 36107 |
| AUS03214.1 | MF768469_p1 | hypothetical protein | phrog_3287 | virion structural protein | head and packaging | 1 | 276 | 1817 |
| AUS03273.1 | MF768469_p60 | hypothetical protein | phrog_3982 | unknown function | unknown function | 1 | 42363 | 42683 |
| AUS03270.1 | MF768469_p57 | hypothetical protein | phrog_8161 | unknown function | unknown function | 1 | 40108 | 40350 |
| AUS03262.1 | MF768469_p49 | hypothetical protein | phrog_12073 | unknown function | unknown function | -1 | 31993 | 32139 |
| AUS03256.1 | MF768469_p43 | hypothetical protein | phrog_4955 | unknown function | unknown function | -1 | 30362 | 30607 |
| AUS03259.1 | MF768469_p46 | hypothetical protein | phrog_10516 | unknown function | unknown function | -1 | 31042 | 31299 |
| AUS03231.1 | MF768469_p18 | hypothetical protein | phrog_8565 | unknown function | unknown function | -1 | 14177 | 14407 |
| AUS03232.1 | MF768469_p19 | hypothetical protein | phrog_5033 | endolysin; inhibits RNA polymerase | lysis | -1 | 14433 | 14936 |
| AUS03216.1 | MF768469_p3 | hypothetical protein | phrog_7642 | unknown function | unknown function | 1 | 2500 | 2934 |
| AUS03271.1 | MF768469_p58 | capsid and scaffold protein | phrog_3927 | head scaffolding protein | head and packaging | 1 | 40350 | 41342 |
| AUS03220.1 | MF768469_p7 | hypothetical protein | phrog_6958 | virion structural protein | head and packaging | 1 | 5906 | 9073 |
| AUS03225.1 | MF768469_p12 | hypothetical protein | phrog_2251 | unknown function | unknown function | -1 | 10951 | 11160 |
| AUS03247.1 | MF768469_p34 | hypothetical protein | phrog_2599 | ribosomal protein S6 glutaminyl transferase | moron, auxiliary metabolic gene and host takeover | -1 | 22503 | 23462 |
| AUS03249.1 | MF768469_p36 | L-glutamine-D-fructose-6-phosphate amidotransferase | phrog_4736 | L-glutamine-D-fructose-6-phosphate aminotransferase | other | -1 | 23765 | 25297 |
| AUS03217.1 | MF768469_p4 | hypothetical protein | phrog_7477 | unknown function | unknown function | 1 | 2915 | 3853 |
| AUS03238.1 | MF768469_p25 | hypothetical protein | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 18245 | 18664 |
| AUS03248.1 | MF768469_p35 | hypothetical protein | phrog_9335 | unknown function | unknown function | -1 | 23534 | 23755 |
| AUS03250.1 | MF768469_p37 | hypothetical protein | phrog_7631 | amidoligase enzyme | other | -1 | 25309 | 26484 |
| AUS03257.1 | MF768469_p44 | hypothetical protein | phrog_8294 | unknown function | unknown function | -1 | 30604 | 30771 |
| AUS03263.1 | MF768469_p50 | hypothetical protein | phrog_10887 | unknown function | unknown function | -1 | 32355 | 32495 |
| AUS03228.1 | MF768469_p15 | hypothetical protein | phrog_14437 | endonuclease | DNA, RNA and nucleotide metabolism | -1 | 12133 | 12372 |
| AUS03269.1 | MF768469_p56 | portal protein | phrog_1216 | portal protein | head and packaging | 1 | 37985 | 40105 |
| AUS03267.1 | MF768469_p54 | baseplate hub protein | phrog_7 | endolysin | lysis | 1 | 36139 | 36537 |
| AUS03226.1 | MF768469_p13 | hypothetical protein | phrog_9960 | unknown function | unknown function | -1 | 11164 | 11382 |
| AUS03261.1 | MF768469_p48 | hypothetical protein | phrog_29615 | unknown function | unknown function | -1 | 31612 | 31881 |