| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF775669 |
Definition |
Lactococcus phage LP8511, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
NUCCORE |
Length |
29953 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
35.11 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE82736.1 | MF775669_p48 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 28076 | 28264 |
| ATE82724.1 | MF775669_p36 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 22885 | 23397 |
| ATE82732.1 | MF775669_p44 | hypothetical protein | phrog_1284 | unknown function | unknown function | -1 | 25837 | 26733 |
| ATE82690.1 | MF775669_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 777 | 2399 |
| ATE82711.1 | MF775669_p23 | transglycosylase | phrog_3874 | transglycosylase | other | -1 | 18341 | 18811 |
| ATE82700.1 | MF775669_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8856 | 9761 |
| ATE82714.1 | MF775669_p26 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19707 | 19874 |
| ATE82694.1 | MF775669_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4332 | 5513 |
| ATE82738.1 | MF775669_p50 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 28527 | 28658 |
| ATE82725.1 | MF775669_p37 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 23394 | 23609 |
| ATE82698.1 | MF775669_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6440 | 6805 |
| ATE82703.1 | MF775669_p15 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 10765 | 11277 |
| ATE82717.1 | MF775669_p29 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 20371 | 20679 |
| ATE82695.1 | MF775669_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5534 | 5797 |
| ATE82693.1 | MF775669_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3803 | 4339 |
| ATE82689.1 | MF775669_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 252 | 776 |
| ATE82726.1 | MF775669_p38 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23622 | 23981 |
| ATE82720.1 | MF775669_p32 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21522 | 21764 |
| ATE82699.1 | MF775669_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6862 | 8832 |
| ATE82739.1 | MF775669_p51 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28655 | 29137 |
| ATE82715.1 | MF775669_p27 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19874 | 20050 |
| ATE82737.1 | MF775669_p49 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 28394 | 28522 |
| ATE82718.1 | MF775669_p30 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20679 | 20798 |
| ATE82704.1 | MF775669_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11277 | 14036 |
| ATE82728.1 | MF775669_p40 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24537 | 25037 |
| ATE82721.1 | MF775669_p33 | hypothetical protein | phrog_4582 | unknown function | unknown function | -1 | 21849 | 22022 |
| ATE82708.1 | MF775669_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16332 | 17126 |
| ATE82713.1 | MF775669_p25 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 19360 | 19707 |
| ATE82692.1 | MF775669_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2686 | 3822 |
| ATE82730.1 | MF775669_p42 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25247 | 25534 |
| ATE82712.1 | MF775669_p24 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18921 | 19187 |
| ATE82729.1 | MF775669_p41 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 25024 | 25290 |
| ATE82709.1 | MF775669_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 17148 | 17501 |
| ATE82716.1 | MF775669_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 20043 | 20297 |
| ATE82740.1 | MF775669_p52 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 29134 | 29301 |
| ATE82696.1 | MF775669_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5797 | 6111 |
| ATE82691.1 | MF775669_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2389 | 2673 |
| ATE82705.1 | MF775669_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 14036 | 14932 |
| ATE82701.1 | MF775669_p12 | major tail protein extension | phrog_3791 | major tail protein | tail | 1 | 8856 | 10449 |
| ATE82722.1 | MF775669_p34 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 22057 | 22386 |
| ATE82723.1 | MF775669_p35 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 22383 | 22805 |
| ATE82735.1 | MF775669_p47 | hypothetical protein | phrog_6866 | unknown function | unknown function | 1 | 27800 | 27946 |
| ATE82707.1 | MF775669_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 16049 | 16342 |
| ATE82727.1 | MF775669_p39 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 23986 | 24552 |
| ATE82731.1 | MF775669_p43 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25581 | 25844 |
| ATE82710.1 | MF775669_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 17498 | 18274 |
| ATE82697.1 | MF775669_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6108 | 6449 |
| ATE82706.1 | MF775669_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14932 | 16059 |
| ATE82734.1 | MF775669_p46 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 27543 | 27662 |
| ATE82733.1 | MF775669_p45 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 26827 | 27048 |
| ATE82702.1 | MF775669_p14 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 10470 | 10745 |
| ATE82719.1 | MF775669_p31 | methylase | phrog_1071 | DNA methyltransferase | other | -1 | 20804 | 21466 |