Genomic map of Lactococcus phage LP9104 (MF775670)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775670
Definition
Lactococcus phage LP9104, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
29157
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
35.15
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE82753.1 MF775670_p12 major tail protein extension phrog_3791 major tail protein tail 1 8856 10449
ATE82741.1 MF775670_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
ATE82750.1 MF775670_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6440 6805
ATE82771.1 MF775670_p31 methylase phrog_1071 DNA methyltransferase other -1 20360 21022
ATE82744.1 MF775670_p4 portal protein phrog_12 portal protein head and packaging 1 2686 3822
ATE82781.1 MF775670_p41 hypothetical protein phrog_1632 unknown function unknown function -1 24306 24593
ATE82751.1 MF775670_p11 neck passage structure phrog_2370 neck passage structure connector 1 6862 8832
ATE82782.1 MF775670_p42 hypothetical protein phrog_1405 unknown function unknown function -1 24640 24912
ATE82784.1 MF775670_p44 hypothetical protein phrog_1284 unknown function unknown function -1 25011 25907
ATE82743.1 MF775670_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2389 2673
ATE82777.1 MF775670_p37 hypothetical protein phrog_1295 unknown function unknown function -1 22951 23166
ATE82756.1 MF775670_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11277 14036
ATE82772.1 MF775670_p32 hypothetical protein phrog_1825 DNA methyltransferase other -1 21078 21320
ATE82752.1 MF775670_p13 major tail protein phrog_1433 major tail protein tail 1 8856 9761
ATE82762.1 MF775670_p22 lysin phrog_670 endolysin lysis 1 17498 18202
ATE82758.1 MF775670_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14932 16059
ATE82779.1 MF775670_p39 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23542 24096
ATE82759.1 MF775670_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16049 16342
ATE82747.1 MF775670_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5534 5797
ATE82786.1 MF775670_p46 hypothetical protein phrog_2413 unknown function unknown function -1 26717 26836
ATE82745.1 MF775670_p5 protease phrog_80 head maturation protease head and packaging 1 3803 4339
ATE82746.1 MF775670_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4332 5513
ATE82787.1 MF775670_p47 hypothetical protein phrog_6866 unknown function unknown function 1 26986 27132
ATE82768.1 MF775670_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19599 19853
ATE82766.1 MF775670_p26 hypothetical protein phrog_1441 unknown function unknown function -1 19263 19430
ATE82774.1 MF775670_p34 hypothetical protein phrog_1919 unknown function unknown function -1 21614 21943
ATE82792.1 MF775670_p52 hypothetical protein phrog_1652 unknown function unknown function 1 28323 28490
ATE82791.1 MF775670_p51 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 27844 28326
ATE82776.1 MF775670_p36 hypothetical protein phrog_1317 unknown function unknown function -1 22442 22954
ATE82789.1 MF775670_p49 hypothetical protein phrog_1952 unknown function unknown function 1 27583 27711
ATE82754.1 MF775670_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10470 10745
ATE82788.1 MF775670_p48 hypothetical protein phrog_1656 unknown function unknown function -1 27265 27453
ATE82769.1 MF775670_p29 hypothetical protein phrog_1225 unknown function unknown function -1 19930 20235
ATE82765.1 MF775670_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18916 19263
ATE82767.1 MF775670_p27 hypothetical protein phrog_1820 unknown function unknown function -1 19430 19606
ATE82749.1 MF775670_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6108 6449
ATE82764.1 MF775670_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18477 18743
ATE82748.1 MF775670_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5797 6111
ATE82778.1 MF775670_p38 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23179 23538
ATE82763.1 MF775670_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18254 18415
ATE82742.1 MF775670_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 777 2399
ATE82755.1 MF775670_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10765 11277
ATE82761.1 MF775670_p21 holin phrog_1379 unknown function unknown function 1 17148 17501
ATE82780.1 MF775670_p40 hypothetical protein phrog_1449 unknown function unknown function -1 24083 24349
ATE82785.1 MF775670_p45 hypothetical protein phrog_2541 unknown function unknown function -1 26001 26222
ATE82775.1 MF775670_p35 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 21940 22362
ATE82790.1 MF775670_p50 hypothetical protein phrog_1436 unknown function unknown function 1 27716 27847
ATE82757.1 MF775670_p17 distal tail protein phrog_1424 tail protein tail 1 14036 14932
ATE82773.1 MF775670_p33 hypothetical protein phrog_4582 unknown function unknown function -1 21406 21579
ATE82770.1 MF775670_p30 hypothetical protein phrog_1508 unknown function unknown function -1 20235 20354
ATE82783.1 MF775670_p43 hypothetical protein phrog_3604 unknown function unknown function -1 24896 25018
ATE82760.1 MF775670_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16332 17126