| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF775672 |
Definition |
Lactococcus phage LP9205b, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
NUCCORE |
Length |
30296 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
34.81 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE82857.1 | MF775672_p14 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 10476 | 10751 |
| ATE82881.1 | MF775672_p38 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 24134 | 24349 |
| ATE82849.1 | MF775672_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4342 | 5523 |
| ATE82893.1 | MF775672_p50 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 28766 | 28894 |
| ATE82851.1 | MF775672_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5807 | 6121 |
| ATE82853.1 | MF775672_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6450 | 6815 |
| ATE82845.1 | MF775672_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 787 | 2409 |
| ATE82856.1 | MF775672_p12 | major tail protein extension | phrog_3791 | major tail protein | tail | 1 | 8866 | 10456 |
| ATE82887.1 | MF775672_p44 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 26079 | 26201 |
| ATE82875.1 | MF775672_p32 | methylase | phrog_56 | DNA methyltransferase | other | -1 | 21075 | 21983 |
| ATE82889.1 | MF775672_p46 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 27184 | 27405 |
| ATE82870.1 | MF775672_p27 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19427 | 19603 |
| ATE82880.1 | MF775672_p37 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 23619 | 24137 |
| ATE82859.1 | MF775672_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11283 | 14033 |
| ATE82890.1 | MF775672_p47 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 27900 | 28019 |
| ATE82865.1 | MF775672_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 17495 | 18199 |
| ATE82864.1 | MF775672_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 17145 | 17498 |
| ATE82861.1 | MF775672_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14929 | 16056 |
| ATE82869.1 | MF775672_p26 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19260 | 19427 |
| ATE82894.1 | MF775672_p51 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 28899 | 29030 |
| ATE82884.1 | MF775672_p41 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 25266 | 25532 |
| ATE82871.1 | MF775672_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19596 | 19850 |
| ATE82876.1 | MF775672_p33 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 22094 | 22516 |
| ATE82892.1 | MF775672_p49 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 28448 | 28636 |
| ATE82867.1 | MF775672_p24 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18474 | 18740 |
| ATE82868.1 | MF775672_p25 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18913 | 19260 |
| ATE82852.1 | MF775672_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6118 | 6459 |
| ATE82847.1 | MF775672_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2696 | 3832 |
| ATE82872.1 | MF775672_p29 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19927 | 20232 |
| ATE82895.1 | MF775672_p52 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29027 | 29509 |
| ATE82885.1 | MF775672_p42 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25489 | 25776 |
| ATE82879.1 | MF775672_p36 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23109 | 23534 |
| ATE82873.1 | MF775672_p30 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20232 | 20351 |
| ATE82883.1 | MF775672_p40 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24725 | 25279 |
| ATE82888.1 | MF775672_p45 | hypothetical protein | phrog_1284 | unknown function | unknown function | -1 | 26194 | 27090 |
| ATE82860.1 | MF775672_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 14033 | 14929 |
| ATE82862.1 | MF775672_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 16046 | 16339 |
| ATE82848.1 | MF775672_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3813 | 4349 |
| ATE82886.1 | MF775672_p43 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25823 | 26095 |
| ATE82846.1 | MF775672_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2399 | 2683 |
| ATE82891.1 | MF775672_p48 | hypothetical protein | phrog_6866 | unknown function | unknown function | 1 | 28169 | 28315 |
| ATE82855.1 | MF775672_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8866 | 9771 |
| ATE82850.1 | MF775672_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5544 | 5807 |
| ATE82878.1 | MF775672_p35 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 22810 | 23112 |
| ATE82863.1 | MF775672_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16329 | 17123 |
| ATE82896.1 | MF775672_p53 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 29506 | 29673 |
| ATE82858.1 | MF775672_p15 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 10771 | 11283 |
| ATE82854.1 | MF775672_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6872 | 8842 |
| ATE82877.1 | MF775672_p34 | hypothetical protein | phrog_4582 | unknown function | unknown function | -1 | 22602 | 22775 |
| ATE82844.1 | MF775672_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 262 | 786 |
| ATE82882.1 | MF775672_p39 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24362 | 24721 |
| ATE82874.1 | MF775672_p31 | methylase | phrog_1071 | DNA methyltransferase | other | -1 | 20357 | 21019 |
| ATE82866.1 | MF775672_p23 | lytic transglycosylase | phrog_3775 | transglycosylase | other | -1 | 18251 | 18412 |