Genomic map of Lactococcus phage LP9205b (MF775672)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775672
Definition
Lactococcus phage LP9205b, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30296
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
34.81
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE82857.1 MF775672_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10476 10751
ATE82881.1 MF775672_p38 hypothetical protein phrog_1295 unknown function unknown function -1 24134 24349
ATE82849.1 MF775672_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4342 5523
ATE82893.1 MF775672_p50 hypothetical protein phrog_1952 unknown function unknown function 1 28766 28894
ATE82851.1 MF775672_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5807 6121
ATE82853.1 MF775672_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6450 6815
ATE82845.1 MF775672_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 787 2409
ATE82856.1 MF775672_p12 major tail protein extension phrog_3791 major tail protein tail 1 8866 10456
ATE82887.1 MF775672_p44 hypothetical protein phrog_3604 unknown function unknown function -1 26079 26201
ATE82875.1 MF775672_p32 methylase phrog_56 DNA methyltransferase other -1 21075 21983
ATE82889.1 MF775672_p46 hypothetical protein phrog_2541 unknown function unknown function -1 27184 27405
ATE82870.1 MF775672_p27 hypothetical protein phrog_1820 unknown function unknown function -1 19427 19603
ATE82880.1 MF775672_p37 hypothetical protein phrog_1317 unknown function unknown function -1 23619 24137
ATE82859.1 MF775672_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11283 14033
ATE82890.1 MF775672_p47 hypothetical protein phrog_2413 unknown function unknown function -1 27900 28019
ATE82865.1 MF775672_p22 lysin phrog_670 endolysin lysis 1 17495 18199
ATE82864.1 MF775672_p21 holin phrog_1379 unknown function unknown function 1 17145 17498
ATE82861.1 MF775672_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14929 16056
ATE82869.1 MF775672_p26 hypothetical protein phrog_1441 unknown function unknown function -1 19260 19427
ATE82894.1 MF775672_p51 hypothetical protein phrog_1436 unknown function unknown function 1 28899 29030
ATE82884.1 MF775672_p41 hypothetical protein phrog_1449 unknown function unknown function -1 25266 25532
ATE82871.1 MF775672_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19596 19850
ATE82876.1 MF775672_p33 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22094 22516
ATE82892.1 MF775672_p49 hypothetical protein phrog_1656 unknown function unknown function -1 28448 28636
ATE82867.1 MF775672_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18474 18740
ATE82868.1 MF775672_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18913 19260
ATE82852.1 MF775672_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6118 6459
ATE82847.1 MF775672_p4 portal protein phrog_12 portal protein head and packaging 1 2696 3832
ATE82872.1 MF775672_p29 hypothetical protein phrog_1225 unknown function unknown function -1 19927 20232
ATE82895.1 MF775672_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29027 29509
ATE82885.1 MF775672_p42 hypothetical protein phrog_1632 unknown function unknown function -1 25489 25776
ATE82879.1 MF775672_p36 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23109 23534
ATE82873.1 MF775672_p30 hypothetical protein phrog_1508 unknown function unknown function -1 20232 20351
ATE82883.1 MF775672_p40 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24725 25279
ATE82888.1 MF775672_p45 hypothetical protein phrog_1284 unknown function unknown function -1 26194 27090
ATE82860.1 MF775672_p17 distal tail protein phrog_1424 tail protein tail 1 14033 14929
ATE82862.1 MF775672_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16046 16339
ATE82848.1 MF775672_p5 protease phrog_80 head maturation protease head and packaging 1 3813 4349
ATE82886.1 MF775672_p43 hypothetical protein phrog_1405 unknown function unknown function -1 25823 26095
ATE82846.1 MF775672_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2399 2683
ATE82891.1 MF775672_p48 hypothetical protein phrog_6866 unknown function unknown function 1 28169 28315
ATE82855.1 MF775672_p13 major tail protein phrog_1433 major tail protein tail 1 8866 9771
ATE82850.1 MF775672_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5544 5807
ATE82878.1 MF775672_p35 hypothetical protein phrog_1919 unknown function unknown function -1 22810 23112
ATE82863.1 MF775672_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16329 17123
ATE82896.1 MF775672_p53 hypothetical protein phrog_1652 unknown function unknown function 1 29506 29673
ATE82858.1 MF775672_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10771 11283
ATE82854.1 MF775672_p11 neck passage structure phrog_2370 neck passage structure connector 1 6872 8842
ATE82877.1 MF775672_p34 hypothetical protein phrog_4582 unknown function unknown function -1 22602 22775
ATE82844.1 MF775672_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 262 786
ATE82882.1 MF775672_p39 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24362 24721
ATE82874.1 MF775672_p31 methylase phrog_1071 DNA methyltransferase other -1 20357 21019
ATE82866.1 MF775672_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18251 18412