Genomic map of Lactococcus phage LP9206b (MF775674)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775674
Definition
Lactococcus phage LP9206b, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30309
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
34.85
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE82964.1 MF775674_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11283 14033
ATE82999.1 MF775674_p51 hypothetical protein phrog_1436 unknown function unknown function 1 28912 29043
ATE82990.1 MF775674_p42 hypothetical protein phrog_1632 unknown function unknown function -1 25502 25789
ATE82960.1 MF775674_p13 major tail protein phrog_1433 major tail protein tail 1 8866 9771
ATE82969.1 MF775674_p21 holin phrog_1379 unknown function unknown function 1 17145 17498
ATE82966.1 MF775674_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14929 16056
ATE82971.1 MF775674_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18251 18412
ATE82974.1 MF775674_p26 hypothetical protein phrog_1441 unknown function unknown function -1 19260 19427
ATE82955.1 MF775674_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5544 5807
ATE82995.1 MF775674_p47 hypothetical protein phrog_2413 unknown function unknown function -1 27913 28032
ATE82991.1 MF775674_p43 hypothetical protein phrog_1405 unknown function unknown function -1 25836 26108
ATE82975.1 MF775674_p27 hypothetical protein phrog_1820 unknown function unknown function -1 19427 19603
ATE82985.1 MF775674_p37 hypothetical protein phrog_1317 unknown function unknown function -1 23638 24150
ATE82963.1 MF775674_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10771 11283
ATE82953.1 MF775674_p5 protease phrog_80 head maturation protease head and packaging 1 3813 4349
ATE82998.1 MF775674_p50 hypothetical protein phrog_1952 unknown function unknown function 1 28779 28907
ATE83001.1 MF775674_p53 hypothetical protein phrog_1652 unknown function unknown function 1 29519 29686
ATE82965.1 MF775674_p17 distal tail protein phrog_1424 tail protein tail 1 14033 14929
ATE82993.1 MF775674_p45 hypothetical protein phrog_1284 unknown function unknown function -1 26207 27103
ATE82981.1 MF775674_p33 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22094 22516
ATE82983.1 MF775674_p35 hypothetical protein phrog_1919 unknown function unknown function -1 22810 23139
ATE82994.1 MF775674_p46 hypothetical protein phrog_2541 unknown function unknown function -1 27197 27418
ATE82954.1 MF775674_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4342 5523
ATE82959.1 MF775674_p11 neck passage structure phrog_2370 neck passage structure connector 1 6872 8842
ATE82992.1 MF775674_p44 hypothetical protein phrog_3604 unknown function unknown function -1 26092 26214
ATE82979.1 MF775674_p31 methylase phrog_1071 DNA methyltransferase other -1 20357 21019
ATE82977.1 MF775674_p29 hypothetical protein phrog_1225 unknown function unknown function -1 19927 20232
ATE82988.1 MF775674_p40 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24738 25292
ATE82973.1 MF775674_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18913 19260
ATE82958.1 MF775674_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6450 6815
ATE82950.1 MF775674_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 787 2409
ATE82989.1 MF775674_p41 hypothetical protein phrog_1449 unknown function unknown function -1 25279 25545
ATE82980.1 MF775674_p32 methylase phrog_56 DNA methyltransferase other -1 21075 21983
ATE82972.1 MF775674_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18474 18740
ATE82967.1 MF775674_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16046 16339
ATE83000.1 MF775674_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29040 29522
ATE82976.1 MF775674_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19596 19850
ATE82997.1 MF775674_p49 hypothetical protein phrog_1656 unknown function unknown function -1 28461 28649
ATE82982.1 MF775674_p34 hypothetical protein phrog_4582 unknown function unknown function -1 22602 22775
ATE82949.1 MF775674_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 262 786
ATE82986.1 MF775674_p38 hypothetical protein phrog_1295 unknown function unknown function -1 24147 24362
ATE82961.1 MF775674_p12 major tail protein extension phrog_3791 major tail protein tail 1 8866 10456
ATE82951.1 MF775674_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2399 2683
ATE82968.1 MF775674_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16329 17123
ATE82952.1 MF775674_p4 portal protein phrog_12 portal protein head and packaging 1 2696 3832
ATE82970.1 MF775674_p22 lysin phrog_670 endolysin lysis 1 17495 18199
ATE82957.1 MF775674_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6118 6459
ATE82962.1 MF775674_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10476 10751
ATE82987.1 MF775674_p39 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24375 24734
ATE82984.1 MF775674_p36 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23136 23558
ATE82978.1 MF775674_p30 hypothetical protein phrog_1508 unknown function unknown function -1 20232 20351
ATE82996.1 MF775674_p48 hypothetical protein phrog_6866 unknown function unknown function 1 28209 28328
ATE82956.1 MF775674_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5807 6121