| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF775674 |
Definition |
Lactococcus phage LP9206b, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
NUCCORE |
Length |
30309 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
34.85 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE82964.1 | MF775674_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11283 | 14033 |
| ATE82999.1 | MF775674_p51 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 28912 | 29043 |
| ATE82990.1 | MF775674_p42 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25502 | 25789 |
| ATE82960.1 | MF775674_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8866 | 9771 |
| ATE82969.1 | MF775674_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 17145 | 17498 |
| ATE82966.1 | MF775674_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14929 | 16056 |
| ATE82971.1 | MF775674_p23 | lytic transglycosylase | phrog_3775 | transglycosylase | other | -1 | 18251 | 18412 |
| ATE82974.1 | MF775674_p26 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19260 | 19427 |
| ATE82955.1 | MF775674_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5544 | 5807 |
| ATE82995.1 | MF775674_p47 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 27913 | 28032 |
| ATE82991.1 | MF775674_p43 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25836 | 26108 |
| ATE82975.1 | MF775674_p27 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19427 | 19603 |
| ATE82985.1 | MF775674_p37 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 23638 | 24150 |
| ATE82963.1 | MF775674_p15 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 10771 | 11283 |
| ATE82953.1 | MF775674_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3813 | 4349 |
| ATE82998.1 | MF775674_p50 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 28779 | 28907 |
| ATE83001.1 | MF775674_p53 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 29519 | 29686 |
| ATE82965.1 | MF775674_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 14033 | 14929 |
| ATE82993.1 | MF775674_p45 | hypothetical protein | phrog_1284 | unknown function | unknown function | -1 | 26207 | 27103 |
| ATE82981.1 | MF775674_p33 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 22094 | 22516 |
| ATE82983.1 | MF775674_p35 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 22810 | 23139 |
| ATE82994.1 | MF775674_p46 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 27197 | 27418 |
| ATE82954.1 | MF775674_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4342 | 5523 |
| ATE82959.1 | MF775674_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6872 | 8842 |
| ATE82992.1 | MF775674_p44 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 26092 | 26214 |
| ATE82979.1 | MF775674_p31 | methylase | phrog_1071 | DNA methyltransferase | other | -1 | 20357 | 21019 |
| ATE82977.1 | MF775674_p29 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19927 | 20232 |
| ATE82988.1 | MF775674_p40 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24738 | 25292 |
| ATE82973.1 | MF775674_p25 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18913 | 19260 |
| ATE82958.1 | MF775674_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6450 | 6815 |
| ATE82950.1 | MF775674_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 787 | 2409 |
| ATE82989.1 | MF775674_p41 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 25279 | 25545 |
| ATE82980.1 | MF775674_p32 | methylase | phrog_56 | DNA methyltransferase | other | -1 | 21075 | 21983 |
| ATE82972.1 | MF775674_p24 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18474 | 18740 |
| ATE82967.1 | MF775674_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 16046 | 16339 |
| ATE83000.1 | MF775674_p52 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29040 | 29522 |
| ATE82976.1 | MF775674_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19596 | 19850 |
| ATE82997.1 | MF775674_p49 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 28461 | 28649 |
| ATE82982.1 | MF775674_p34 | hypothetical protein | phrog_4582 | unknown function | unknown function | -1 | 22602 | 22775 |
| ATE82949.1 | MF775674_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 262 | 786 |
| ATE82986.1 | MF775674_p38 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 24147 | 24362 |
| ATE82961.1 | MF775674_p12 | major tail protein extension | phrog_3791 | major tail protein | tail | 1 | 8866 | 10456 |
| ATE82951.1 | MF775674_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2399 | 2683 |
| ATE82968.1 | MF775674_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16329 | 17123 |
| ATE82952.1 | MF775674_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2696 | 3832 |
| ATE82970.1 | MF775674_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 17495 | 18199 |
| ATE82957.1 | MF775674_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6118 | 6459 |
| ATE82962.1 | MF775674_p14 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 10476 | 10751 |
| ATE82987.1 | MF775674_p39 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24375 | 24734 |
| ATE82984.1 | MF775674_p36 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 23136 | 23558 |
| ATE82978.1 | MF775674_p30 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20232 | 20351 |
| ATE82996.1 | MF775674_p48 | hypothetical protein | phrog_6866 | unknown function | unknown function | 1 | 28209 | 28328 |
| ATE82956.1 | MF775674_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5807 | 6121 |