Genomic map of Lactococcus phage LP9206c (MF775675)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775675
Definition
Lactococcus phage LP9206c, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
29291
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
34.95
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83016.1 MF775675_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10774 11286
ATE83010.1 MF775675_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6117 6458
ATE83026.1 MF775675_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18916 19263
ATE83036.1 MF775675_p35 methylase singleton unknown function unknown function -1 21493 21882
ATE83020.1 MF775675_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16049 16342
ATE83014.1 MF775675_p12 major tail protein extension phrog_3791 major tail protein tail 1 8865 10458
ATE83013.1 MF775675_p13 major tail protein phrog_1433 major tail protein tail 1 8865 9770
ATE83012.1 MF775675_p11 neck passage structure phrog_2370 neck passage structure connector 1 6871 8841
ATE83034.1 MF775675_p33 hypothetical protein phrog_3972 unknown function unknown function -1 20929 21279
ATE83002.1 MF775675_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 261 785
ATE83003.1 MF775675_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 786 2408
ATE83019.1 MF775675_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14932 16059
ATE83037.1 MF775675_p36 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22108 22533
ATE83035.1 MF775675_p34 hypothetical protein singleton unknown function unknown function -1 21341 21478
ATE83047.1 MF775675_p46 hypothetical protein phrog_2541 unknown function unknown function -1 26183 26404
ATE83005.1 MF775675_p4 portal protein phrog_12 portal protein head and packaging 1 2695 3831
ATE83045.1 MF775675_p44 hypothetical protein phrog_3604 unknown function unknown function -1 25078 25200
ATE83042.1 MF775675_p41 hypothetical protein phrog_1449 unknown function unknown function -1 24265 24531
ATE83025.1 MF775675_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18477 18743
ATE83046.1 MF775675_p45 hypothetical protein phrog_1284 unknown function unknown function -1 25193 26089
ATE83052.1 MF775675_p51 hypothetical protein phrog_1436 unknown function unknown function 1 27898 28029
ATE83049.1 MF775675_p48 hypothetical protein phrog_6866 unknown function unknown function 1 27168 27314
ATE83029.1 MF775675_p28 hypothetical protein phrog_2530 unknown function unknown function -1 19608 19811
ATE83018.1 MF775675_p17 distal tail protein phrog_1424 tail protein tail 1 14036 14932
ATE83022.1 MF775675_p21 holin phrog_1379 unknown function unknown function 1 17148 17501
ATE83024.1 MF775675_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18254 18415
ATE83041.1 MF775675_p40 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23724 24278
ATE83004.1 MF775675_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2398 2682
ATE83017.1 MF775675_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11286 14036
ATE83033.1 MF775675_p32 hypothetical protein phrog_1083 unknown function unknown function -1 20609 20932
ATE83008.1 MF775675_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5543 5806
ATE83038.1 MF775675_p37 hypothetical protein phrog_1317 unknown function unknown function -1 22618 23136
ATE83021.1 MF775675_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16332 17126
ATE83051.1 MF775675_p50 hypothetical protein phrog_1952 unknown function unknown function 1 27765 27893
ATE83015.1 MF775675_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10479 10754
ATE83048.1 MF775675_p47 hypothetical protein phrog_2413 unknown function unknown function -1 26899 27018
ATE83040.1 MF775675_p39 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23361 23720
ATE83032.1 MF775675_p31 hypothetical protein phrog_1508 unknown function unknown function -1 20479 20598
ATE83044.1 MF775675_p43 hypothetical protein phrog_1405 unknown function unknown function -1 24822 25094
ATE83011.1 MF775675_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6449 6814
ATE83054.1 MF775675_p53 hypothetical protein phrog_1652 unknown function unknown function 1 28505 28672
ATE83006.1 MF775675_p5 protease phrog_80 head maturation protease head and packaging 1 3812 4348
ATE83043.1 MF775675_p42 hypothetical protein phrog_1632 unknown function unknown function -1 24488 24775
ATE83007.1 MF775675_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4341 5522
ATE83023.1 MF775675_p22 lysin phrog_670 endolysin lysis 1 17498 18202
ATE83027.1 MF775675_p26 hypothetical protein phrog_1441 unknown function unknown function -1 19263 19430
ATE83050.1 MF775675_p49 hypothetical protein phrog_1656 unknown function unknown function -1 27447 27635
ATE83009.1 MF775675_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5806 6120
ATE83031.1 MF775675_p30 hypothetical protein phrog_1225 unknown function unknown function -1 20171 20479
ATE83039.1 MF775675_p38 hypothetical protein phrog_1295 unknown function unknown function -1 23133 23348
ATE83030.1 MF775675_p29 hypothetical protein phrog_1509 unknown function unknown function -1 19841 20092
ATE83053.1 MF775675_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28026 28508
ATE83028.1 MF775675_p27 hypothetical protein phrog_1820 unknown function unknown function -1 19430 19606