Genomic map of Lactococcus phage LP9210 (MF775677)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775677
Definition
Lactococcus phage LP9210, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
29525
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
35.14
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83150.1 MF775677_p42 hypothetical protein phrog_1632 unknown function unknown function -1 24811 25101
ATE83153.1 MF775677_p45 hypothetical protein phrog_2541 unknown function unknown function -1 26394 26615
ATE83135.1 MF775677_p27 hypothetical protein phrog_1820 unknown function unknown function -1 19441 19617
ATE83144.1 MF775677_p36 hypothetical protein phrog_1317 unknown function unknown function -1 22453 22965
ATE83131.1 MF775677_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18265 18426
ATE83134.1 MF775677_p26 hypothetical protein phrog_1441 unknown function unknown function -1 19274 19444
ATE83146.1 MF775677_p38 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23190 23549
ATE83160.1 MF775677_p52 hypothetical protein phrog_1652 unknown function unknown function 1 28713 28880
ATE83126.1 MF775677_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14943 16070
ATE83155.1 MF775677_p47 hypothetical protein phrog_6866 unknown function unknown function 1 27406 27525
ATE83115.1 MF775677_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5545 5808
ATE83139.1 MF775677_p31 methylase phrog_1071 DNA methyltransferase other -1 20371 21033
ATE83127.1 MF775677_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16060 16353
ATE83120.1 MF775677_p13 major tail protein phrog_1433 major tail protein tail 1 8867 9772
ATE83142.1 MF775677_p34 hypothetical protein phrog_1919 unknown function unknown function -1 21625 21954
ATE83157.1 MF775677_p49 hypothetical protein phrog_1952 unknown function unknown function 1 27973 28101
ATE83145.1 MF775677_p37 hypothetical protein phrog_1295 unknown function unknown function -1 22962 23177
ATE83119.1 MF775677_p11 neck passage structure phrog_2370 neck passage structure connector 1 6873 8843
ATE83125.1 MF775677_p17 distal tail protein phrog_1424 tail protein tail 1 14047 14943
ATE83130.1 MF775677_p22 lysin phrog_670 endolysin lysis 1 17509 18213
ATE83117.1 MF775677_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6119 6460
ATE83116.1 MF775677_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5808 6122
ATE83114.1 MF775677_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4343 5524
ATE83137.1 MF775677_p29 hypothetical protein phrog_1225 unknown function unknown function -1 19941 20246
ATE83129.1 MF775677_p21 holin phrog_1379 unknown function unknown function 1 17159 17512
ATE83136.1 MF775677_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19610 19864
ATE83151.1 MF775677_p43 hypothetical protein phrog_1405 unknown function unknown function -1 25154 25411
ATE83122.1 MF775677_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10481 10756
ATE83124.1 MF775677_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11288 14047
ATE83128.1 MF775677_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16343 17137
ATE83147.1 MF775677_p39 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23553 24107
ATE83156.1 MF775677_p48 hypothetical protein phrog_1656 unknown function unknown function -1 27655 27843
ATE83121.1 MF775677_p12 major tail protein extension phrog_3791 major tail protein tail 1 8867 10460
ATE83110.1 MF775677_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 788 2410
ATE83133.1 MF775677_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18927 19274
ATE83158.1 MF775677_p50 hypothetical protein phrog_1436 unknown function unknown function 1 28106 28237
ATE83123.1 MF775677_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10776 11288
ATE83109.1 MF775677_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 263 787
ATE83140.1 MF775677_p32 hypothetical protein phrog_1825 DNA methyltransferase other -1 21089 21331
ATE83141.1 MF775677_p33 hypothetical protein phrog_4582 unknown function unknown function -1 21417 21590
ATE83154.1 MF775677_p46 hypothetical protein phrog_2413 unknown function unknown function -1 27110 27229
ATE83118.1 MF775677_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6451 6816
ATE83159.1 MF775677_p51 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28234 28716
ATE83138.1 MF775677_p30 hypothetical protein phrog_1508 unknown function unknown function -1 20246 20365
ATE83111.1 MF775677_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2400 2684
ATE83152.1 MF775677_p44 hypothetical protein phrog_1284 unknown function unknown function -1 25404 26300
ATE83149.1 MF775677_p41 hypothetical protein phrog_1449 unknown function unknown function -1 24591 24857
ATE83132.1 MF775677_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18488 18754
ATE83143.1 MF775677_p35 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 21951 22373
ATE83148.1 MF775677_p40 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24104 24604
ATE83112.1 MF775677_p4 portal protein phrog_12 portal protein head and packaging 1 2697 3833
ATE83113.1 MF775677_p5 protease phrog_80 head maturation protease head and packaging 1 3814 4350