| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF775677 |
Definition |
Lactococcus phage LP9210, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
NUCCORE |
Length |
29525 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
35.14 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE83150.1 | MF775677_p42 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 24811 | 25101 |
| ATE83153.1 | MF775677_p45 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 26394 | 26615 |
| ATE83135.1 | MF775677_p27 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19441 | 19617 |
| ATE83144.1 | MF775677_p36 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 22453 | 22965 |
| ATE83131.1 | MF775677_p23 | lytic transglycosylase | phrog_3775 | transglycosylase | other | -1 | 18265 | 18426 |
| ATE83134.1 | MF775677_p26 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19274 | 19444 |
| ATE83146.1 | MF775677_p38 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23190 | 23549 |
| ATE83160.1 | MF775677_p52 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 28713 | 28880 |
| ATE83126.1 | MF775677_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14943 | 16070 |
| ATE83155.1 | MF775677_p47 | hypothetical protein | phrog_6866 | unknown function | unknown function | 1 | 27406 | 27525 |
| ATE83115.1 | MF775677_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5545 | 5808 |
| ATE83139.1 | MF775677_p31 | methylase | phrog_1071 | DNA methyltransferase | other | -1 | 20371 | 21033 |
| ATE83127.1 | MF775677_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 16060 | 16353 |
| ATE83120.1 | MF775677_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8867 | 9772 |
| ATE83142.1 | MF775677_p34 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 21625 | 21954 |
| ATE83157.1 | MF775677_p49 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 27973 | 28101 |
| ATE83145.1 | MF775677_p37 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 22962 | 23177 |
| ATE83119.1 | MF775677_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6873 | 8843 |
| ATE83125.1 | MF775677_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 14047 | 14943 |
| ATE83130.1 | MF775677_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 17509 | 18213 |
| ATE83117.1 | MF775677_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6119 | 6460 |
| ATE83116.1 | MF775677_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5808 | 6122 |
| ATE83114.1 | MF775677_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4343 | 5524 |
| ATE83137.1 | MF775677_p29 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19941 | 20246 |
| ATE83129.1 | MF775677_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 17159 | 17512 |
| ATE83136.1 | MF775677_p28 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19610 | 19864 |
| ATE83151.1 | MF775677_p43 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25154 | 25411 |
| ATE83122.1 | MF775677_p14 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 10481 | 10756 |
| ATE83124.1 | MF775677_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11288 | 14047 |
| ATE83128.1 | MF775677_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16343 | 17137 |
| ATE83147.1 | MF775677_p39 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 23553 | 24107 |
| ATE83156.1 | MF775677_p48 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 27655 | 27843 |
| ATE83121.1 | MF775677_p12 | major tail protein extension | phrog_3791 | major tail protein | tail | 1 | 8867 | 10460 |
| ATE83110.1 | MF775677_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 788 | 2410 |
| ATE83133.1 | MF775677_p25 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18927 | 19274 |
| ATE83158.1 | MF775677_p50 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 28106 | 28237 |
| ATE83123.1 | MF775677_p15 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 10776 | 11288 |
| ATE83109.1 | MF775677_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 263 | 787 |
| ATE83140.1 | MF775677_p32 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21089 | 21331 |
| ATE83141.1 | MF775677_p33 | hypothetical protein | phrog_4582 | unknown function | unknown function | -1 | 21417 | 21590 |
| ATE83154.1 | MF775677_p46 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 27110 | 27229 |
| ATE83118.1 | MF775677_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6451 | 6816 |
| ATE83159.1 | MF775677_p51 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28234 | 28716 |
| ATE83138.1 | MF775677_p30 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20246 | 20365 |
| ATE83111.1 | MF775677_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2400 | 2684 |
| ATE83152.1 | MF775677_p44 | hypothetical protein | phrog_1284 | unknown function | unknown function | -1 | 25404 | 26300 |
| ATE83149.1 | MF775677_p41 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 24591 | 24857 |
| ATE83132.1 | MF775677_p24 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18488 | 18754 |
| ATE83143.1 | MF775677_p35 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 21951 | 22373 |
| ATE83148.1 | MF775677_p40 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24104 | 24604 |
| ATE83112.1 | MF775677_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2697 | 3833 |
| ATE83113.1 | MF775677_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3814 | 4350 |