Genomic map of Lactococcus phage LP9405a (MF775679)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775679
Definition
Lactococcus phage LP9405a, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30083
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
34.97
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83224.1 MF775679_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6460 6825
ATE83239.1 MF775679_p25 hypothetical protein phrog_1441 unknown function unknown function -1 19131 19298
ATE83240.1 MF775679_p26 hypothetical protein phrog_1820 unknown function unknown function -1 19298 19474
ATE83246.1 MF775679_p32 methylase phrog_56 DNA methyltransferase other -1 21190 22062
ATE83223.1 MF775679_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6128 6469
ATE83256.1 MF775679_p42 hypothetical protein phrog_1632 unknown function unknown function -1 25276 25563
ATE83238.1 MF775679_p24 hypothetical protein phrog_1415 unknown function unknown function -1 18784 19131
ATE83250.1 MF775679_p36 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22896 23333
ATE83227.1 MF775679_p12 major tail protein extension phrog_3791 major tail protein tail 1 8876 10466
ATE83249.1 MF775679_p35 hypothetical protein phrog_1919 unknown function unknown function -1 22597 22899
ATE83243.1 MF775679_p29 hypothetical protein phrog_1225 unknown function unknown function -1 20039 20347
ATE83241.1 MF775679_p27 hypothetical protein phrog_2530 unknown function unknown function -1 19476 19679
ATE83259.1 MF775679_p45 hypothetical protein phrog_1284 unknown function unknown function -1 25981 26877
ATE83266.1 MF775679_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28814 29296
ATE83242.1 MF775679_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19709 19960
ATE83253.1 MF775679_p39 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24149 24508
ATE83220.1 MF775679_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4352 5533
ATE83267.1 MF775679_p53 hypothetical protein phrog_1652 unknown function unknown function 1 29293 29460
ATE83236.1 MF775679_p22 lysin phrog_670 endolysin lysis 1 17505 18281
ATE83229.1 MF775679_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10781 11293
ATE83216.1 MF775679_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 797 2419
ATE83219.1 MF775679_p5 protease phrog_80 head maturation protease head and packaging 1 3823 4359
ATE83263.1 MF775679_p49 hypothetical protein phrog_1656 unknown function unknown function -1 28235 28423
ATE83234.1 MF775679_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16339 17133
ATE83260.1 MF775679_p46 hypothetical protein phrog_2541 unknown function unknown function -1 26971 27192
ATE83254.1 MF775679_p40 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24512 25066
ATE83230.1 MF775679_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11293 14043
ATE83264.1 MF775679_p50 hypothetical protein phrog_1952 unknown function unknown function 1 28553 28681
ATE83231.1 MF775679_p17 distal tail protein phrog_1424 tail protein tail 1 14043 14939
ATE83261.1 MF775679_p47 hypothetical protein phrog_2413 unknown function unknown function -1 27687 27806
ATE83232.1 MF775679_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14939 16066
ATE83252.1 MF775679_p38 hypothetical protein phrog_1295 unknown function unknown function -1 23921 24136
ATE83258.1 MF775679_p44 hypothetical protein phrog_3604 unknown function unknown function -1 25866 25988
ATE83235.1 MF775679_p21 holin phrog_1379 unknown function unknown function 1 17155 17508
ATE83228.1 MF775679_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10486 10761
ATE83247.1 MF775679_p33 hypothetical protein phrog_1825 DNA methyltransferase other -1 22055 22303
ATE83218.1 MF775679_p4 portal protein phrog_12 portal protein head and packaging 1 2706 3842
ATE83215.1 MF775679_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 272 796
ATE83217.1 MF775679_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2409 2693
ATE83226.1 MF775679_p13 major tail protein phrog_1433 major tail protein tail 1 8876 9781
ATE83262.1 MF775679_p48 hypothetical protein phrog_6866 unknown function unknown function 1 27983 28102
ATE83255.1 MF775679_p41 hypothetical protein phrog_1449 unknown function unknown function -1 25053 25319
ATE83225.1 MF775679_p11 neck passage structure phrog_2370 neck passage structure connector 1 6882 8852
ATE83248.1 MF775679_p34 hypothetical protein phrog_4582 unknown function unknown function -1 22389 22562
ATE83222.1 MF775679_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5817 6131
ATE83257.1 MF775679_p43 hypothetical protein phrog_1405 unknown function unknown function -1 25610 25882
ATE83251.1 MF775679_p37 hypothetical protein phrog_1317 unknown function unknown function -1 23406 23924
ATE83233.1 MF775679_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16056 16349
ATE83244.1 MF775679_p30 hypothetical protein phrog_1508 unknown function unknown function -1 20347 20466
ATE83237.1 MF775679_p23 hypothetical protein phrog_1430 unknown function unknown function -1 18342 18611
ATE83245.1 MF775679_p31 methylase phrog_1071 DNA methyltransferase other -1 20472 21134
ATE83221.1 MF775679_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5554 5817
ATE83265.1 MF775679_p51 hypothetical protein phrog_1436 unknown function unknown function 1 28686 28817