Genomic map of Lactococcus phage LP9405b (MF775680)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775680
Definition
Lactococcus phage LP9405b, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
29294
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
34.92
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83275.1 MF775680_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5807 6121
ATE83283.1 MF775680_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11283 14033
ATE83312.1 MF775680_p45 hypothetical protein phrog_2541 unknown function unknown function -1 26182 26403
ATE83293.1 MF775680_p26 hypothetical protein phrog_1441 unknown function unknown function -1 19260 19427
ATE83279.1 MF775680_p13 major tail protein phrog_1433 major tail protein tail 1 8866 9771
ATE83297.1 MF775680_p30 hypothetical protein phrog_1225 unknown function unknown function -1 20157 20465
ATE83270.1 MF775680_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2399 2683
ATE83273.1 MF775680_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4342 5523
ATE83282.1 MF775680_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10771 11283
ATE83276.1 MF775680_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6118 6459
ATE83317.1 MF775680_p50 hypothetical protein phrog_1436 unknown function unknown function 1 27897 28028
ATE83272.1 MF775680_p5 protease phrog_80 head maturation protease head and packaging 1 3813 4349
ATE83290.1 MF775680_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18251 18412
ATE83286.1 MF775680_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16046 16339
ATE83319.1 MF775680_p52 hypothetical protein phrog_1652 unknown function unknown function 1 28504 28671
ATE83313.1 MF775680_p46 hypothetical protein phrog_2413 unknown function unknown function -1 26898 27017
ATE83268.1 MF775680_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 262 786
ATE83294.1 MF775680_p27 hypothetical protein phrog_1820 unknown function unknown function -1 19427 19603
ATE83271.1 MF775680_p4 portal protein phrog_12 portal protein head and packaging 1 2696 3832
ATE83292.1 MF775680_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18913 19260
ATE83291.1 MF775680_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18474 18740
ATE83281.1 MF775680_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10476 10751
ATE83315.1 MF775680_p48 hypothetical protein phrog_1656 unknown function unknown function -1 27446 27634
ATE83287.1 MF775680_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16329 17123
ATE83318.1 MF775680_p51 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28025 28507
ATE83298.1 MF775680_p31 hypothetical protein phrog_1508 unknown function unknown function -1 20465 20584
ATE83303.1 MF775680_p36 hypothetical protein phrog_1317 unknown function unknown function -1 22241 22753
ATE83301.1 MF775680_p34 hypothetical protein phrog_4582 unknown function unknown function -1 21636 21809
ATE83302.1 MF775680_p35 hypothetical protein phrog_1919 unknown function unknown function -1 21844 22158
ATE83274.1 MF775680_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5544 5807
ATE83300.1 MF775680_p33 hypothetical protein phrog_1825 DNA methyltransferase other -1 21308 21550
ATE83316.1 MF775680_p49 hypothetical protein phrog_1952 unknown function unknown function 1 27764 27892
ATE83310.1 MF775680_p43 hypothetical protein phrog_1405 unknown function unknown function -1 24942 25199
ATE83284.1 MF775680_p17 distal tail protein phrog_1424 tail protein tail 1 14033 14929
ATE83288.1 MF775680_p21 holin phrog_1379 unknown function unknown function 1 17145 17498
ATE83269.1 MF775680_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 787 2409
ATE83285.1 MF775680_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14929 16056
ATE83289.1 MF775680_p22 lysin phrog_670 endolysin lysis 1 17495 18199
ATE83280.1 MF775680_p12 major tail protein extension phrog_3791 major tail protein tail 1 8866 10456
ATE83299.1 MF775680_p32 methylase phrog_1071 DNA methyltransferase other -1 20590 21252
ATE83307.1 MF775680_p40 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23892 24392
ATE83314.1 MF775680_p47 hypothetical protein phrog_6866 unknown function unknown function 1 27194 27313
ATE83278.1 MF775680_p11 neck passage structure phrog_2370 neck passage structure connector 1 6872 8842
ATE83306.1 MF775680_p39 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23341 23895
ATE83308.1 MF775680_p41 hypothetical protein phrog_1449 unknown function unknown function -1 24379 24645
ATE83304.1 MF775680_p37 hypothetical protein phrog_1295 unknown function unknown function -1 22750 22965
ATE83295.1 MF775680_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19596 19832
ATE83296.1 MF775680_p29 hypothetical protein phrog_3365 unknown function unknown function -1 19894 20082
ATE83277.1 MF775680_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6450 6815
ATE83305.1 MF775680_p38 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 22978 23337
ATE83309.1 MF775680_p42 hypothetical protein phrog_1632 unknown function unknown function -1 24599 24889
ATE83311.1 MF775680_p44 hypothetical protein phrog_1284 unknown function unknown function -1 25192 26088