Genomic map of Lactococcus phage LP9406 (MF775681)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775681
Definition
Lactococcus phage LP9406, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30237
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
34.83
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83363.1 MF775681_p44 hypothetical protein phrog_1405 unknown function unknown function -1 25764 26036
ATE83320.1 MF775681_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 262 786
ATE83330.1 MF775681_p11 neck passage structure phrog_2370 neck passage structure connector 1 6872 8842
ATE83331.1 MF775681_p13 major tail protein phrog_1433 major tail protein tail 1 8866 9771
ATE83365.1 MF775681_p46 hypothetical protein phrog_1284 unknown function unknown function -1 26135 27031
ATE83346.1 MF775681_p27 hypothetical protein phrog_1820 unknown function unknown function -1 19427 19603
ATE83366.1 MF775681_p47 hypothetical protein phrog_2541 unknown function unknown function -1 27125 27346
ATE83334.1 MF775681_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10771 11283
ATE83368.1 MF775681_p49 hypothetical protein phrog_6866 unknown function unknown function 1 28110 28256
ATE83354.1 MF775681_p35 hypothetical protein phrog_4582 unknown function unknown function -1 22543 22716
ATE83367.1 MF775681_p48 hypothetical protein phrog_2413 unknown function unknown function -1 27841 27960
ATE83364.1 MF775681_p45 hypothetical protein phrog_3604 unknown function unknown function -1 26020 26142
ATE83359.1 MF775681_p40 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24303 24662
ATE83355.1 MF775681_p36 hypothetical protein phrog_1919 unknown function unknown function -1 22751 23053
ATE83357.1 MF775681_p38 hypothetical protein phrog_1317 unknown function unknown function -1 23560 24078
ATE83369.1 MF775681_p50 hypothetical protein phrog_1656 unknown function unknown function -1 28389 28577
ATE83373.1 MF775681_p54 hypothetical protein phrog_1652 unknown function unknown function 1 29447 29614
ATE83347.1 MF775681_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19596 19832
ATE83349.1 MF775681_p30 hypothetical protein phrog_1225 unknown function unknown function -1 20157 20465
ATE83323.1 MF775681_p4 portal protein phrog_12 portal protein head and packaging 1 2696 3832
ATE83351.1 MF775681_p32 methylase phrog_1071 DNA methyltransferase other -1 20590 21252
ATE83332.1 MF775681_p12 major tail protein extension phrog_3791 major tail protein tail 1 8866 10456
ATE83353.1 MF775681_p34 hypothetical protein phrog_1825 DNA methyltransferase other -1 22209 22457
ATE83325.1 MF775681_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4342 5523
ATE83361.1 MF775681_p42 hypothetical protein phrog_1449 unknown function unknown function -1 25207 25473
ATE83342.1 MF775681_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18251 18412
ATE83321.1 MF775681_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 787 2409
ATE83356.1 MF775681_p37 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23050 23475
ATE83337.1 MF775681_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14929 16056
ATE83322.1 MF775681_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2399 2683
ATE83345.1 MF775681_p26 hypothetical protein phrog_1441 unknown function unknown function -1 19260 19427
ATE83340.1 MF775681_p21 holin phrog_1379 unknown function unknown function 1 17145 17498
ATE83371.1 MF775681_p52 hypothetical protein phrog_1436 unknown function unknown function 1 28840 28971
ATE83370.1 MF775681_p51 hypothetical protein phrog_1952 unknown function unknown function 1 28707 28835
ATE83341.1 MF775681_p22 lysin phrog_670 endolysin lysis 1 17495 18199
ATE83333.1 MF775681_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10476 10751
ATE83338.1 MF775681_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16046 16339
ATE83326.1 MF775681_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5544 5807
ATE83329.1 MF775681_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6450 6815
ATE83327.1 MF775681_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5807 6121
ATE83352.1 MF775681_p33 methylase phrog_56 DNA methyltransferase other -1 21308 22216
ATE83336.1 MF775681_p17 distal tail protein phrog_1424 tail protein tail 1 14033 14929
ATE83358.1 MF775681_p39 hypothetical protein phrog_1295 unknown function unknown function -1 24075 24290
ATE83324.1 MF775681_p5 protease phrog_80 head maturation protease head and packaging 1 3813 4349
ATE83339.1 MF775681_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16329 17123
ATE83360.1 MF775681_p41 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24666 25220
ATE83328.1 MF775681_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6118 6459
ATE83344.1 MF775681_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18913 19260
ATE83350.1 MF775681_p31 hypothetical protein phrog_1508 unknown function unknown function -1 20465 20584
ATE83343.1 MF775681_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18474 18740
ATE83335.1 MF775681_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11283 14033
ATE83362.1 MF775681_p43 hypothetical protein phrog_1632 unknown function unknown function -1 25430 25717
ATE83372.1 MF775681_p53 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28968 29450
ATE83348.1 MF775681_p29 hypothetical protein phrog_3365 unknown function unknown function -1 19894 20139