Genomic map of Lactococcus phage LP9609 (MF775682)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775682
Definition
Lactococcus phage LP9609, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30945
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
34.76
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83415.1 MF775682_p42 hypothetical protein phrog_1632 unknown function unknown function -1 25188 25478
ATE83388.1 MF775682_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10771 11283
ATE83420.1 MF775682_p47 hypothetical protein phrog_2541 unknown function unknown function -1 27404 27625
ATE83386.1 MF775682_p12 major tail protein extension phrog_3791 major tail protein tail 1 8866 10456
ATE83395.1 MF775682_p22 lysin phrog_670 endolysin lysis 1 17495 18199
ATE83416.1 MF775682_p43 hypothetical protein phrog_1405 unknown function unknown function -1 25525 25797
ATE83424.1 MF775682_p51 hypothetical protein phrog_1656 unknown function unknown function -1 29067 29255
ATE83406.1 MF775682_p33 hypothetical protein phrog_1825 DNA methyltransferase other -1 21976 22224
ATE83389.1 MF775682_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11283 14033
ATE83390.1 MF775682_p17 distal tail protein phrog_1424 tail protein tail 1 14033 14929
ATE83412.1 MF775682_p39 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24064 24423
ATE83384.1 MF775682_p11 neck passage structure phrog_2370 neck passage structure connector 1 6872 8842
ATE83409.1 MF775682_p36 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22817 23242
ATE83383.1 MF775682_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6456 6815
ATE83414.1 MF775682_p41 hypothetical protein phrog_1449 unknown function unknown function -1 24950 25234
ATE83403.1 MF775682_p30 hypothetical protein phrog_1508 unknown function unknown function -1 20232 20351
ATE83379.1 MF775682_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4342 5523
ATE83375.1 MF775682_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 787 2409
ATE83401.1 MF775682_p28 hypothetical protein phrog_1509 unknown function unknown function -1 19596 19850
ATE83405.1 MF775682_p32 methylase phrog_56 DNA methyltransferase other -1 21075 21983
ATE83404.1 MF775682_p31 methylase phrog_1071 DNA methyltransferase other -1 20357 21019
ATE83418.1 MF775682_p45 hypothetical protein phrog_1284 unknown function unknown function -1 25896 26843
ATE83425.1 MF775682_p52 hypothetical protein phrog_1952 unknown function unknown function 1 29385 29513
ATE83411.1 MF775682_p38 hypothetical protein phrog_1295 unknown function unknown function -1 23836 24051
ATE83380.1 MF775682_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5544 5807
ATE83381.1 MF775682_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5807 6121
ATE83382.1 MF775682_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6118 6459
ATE83408.1 MF775682_p35 hypothetical protein phrog_1919 unknown function unknown function -1 22518 22820
ATE83417.1 MF775682_p44 hypothetical protein phrog_3604 unknown function unknown function -1 25781 25903
ATE83394.1 MF775682_p21 holin phrog_1379 unknown function unknown function 1 17145 17498
ATE83396.1 MF775682_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18251 18412
ATE83398.1 MF775682_p25 hypothetical protein phrog_1415 unknown function unknown function -1 18913 19260
ATE83376.1 MF775682_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2399 2683
ATE83428.1 MF775682_p55 hypothetical protein phrog_1652 unknown function unknown function 1 30125 30292
ATE83397.1 MF775682_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18474 18740
ATE83378.1 MF775682_p5 protease phrog_80 head maturation protease head and packaging 1 3813 4349
ATE83391.1 MF775682_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14929 16056
ATE83374.1 MF775682_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 262 786
ATE83377.1 MF775682_p4 portal protein phrog_12 portal protein head and packaging 1 2696 3832
ATE83423.1 MF775682_p50 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 28654 29070
ATE83413.1 MF775682_p40 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24427 24981
ATE83387.1 MF775682_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10476 10751
ATE83426.1 MF775682_p53 hypothetical protein phrog_1436 unknown function unknown function 1 29518 29649
ATE83421.1 MF775682_p48 hypothetical protein phrog_2413 unknown function unknown function -1 28121 28240
ATE83422.1 MF775682_p49 hypothetical protein phrog_6866 unknown function unknown function 1 28417 28536
ATE83400.1 MF775682_p27 hypothetical protein phrog_1820 unknown function unknown function -1 19427 19603
ATE83402.1 MF775682_p29 hypothetical protein phrog_1225 unknown function unknown function -1 19924 20232
ATE83392.1 MF775682_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16046 16339
ATE83393.1 MF775682_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16329 17123
ATE83407.1 MF775682_p34 hypothetical protein phrog_4582 unknown function unknown function -1 22310 22483
ATE83427.1 MF775682_p54 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29646 30128
ATE83410.1 MF775682_p37 hypothetical protein phrog_1317 unknown function unknown function -1 23327 23839
ATE83399.1 MF775682_p26 hypothetical protein phrog_1441 unknown function unknown function -1 19260 19427
ATE83419.1 MF775682_p46 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26830 27267
ATE83385.1 MF775682_p13 major tail protein phrog_1433 major tail protein tail 1 8866 9771