| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF775684 |
Definition |
Lactococcus phage LP9801, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
NUCCORE |
Length |
30204 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
34.85 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE83509.1 | MF775684_p27 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19260 | 19427 |
| ATE83486.1 | MF775684_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2696 | 3832 |
| ATE83506.1 | MF775684_p24 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18474 | 18740 |
| ATE83487.1 | MF775684_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3813 | 4349 |
| ATE83491.1 | MF775684_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6118 | 6459 |
| ATE83510.1 | MF775684_p28 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19427 | 19603 |
| ATE83519.1 | MF775684_p37 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 22420 | 22932 |
| ATE83518.1 | MF775684_p36 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 21910 | 22335 |
| ATE83536.1 | MF775684_p54 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28905 | 29387 |
| ATE83490.1 | MF775684_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5807 | 6121 |
| ATE83516.1 | MF775684_p34 | hypothetical protein | phrog_4582 | unknown function | unknown function | -1 | 21403 | 21576 |
| ATE83495.1 | MF775684_p12 | major tail protein extension | phrog_3791 | major tail protein | tail | 1 | 8866 | 10456 |
| ATE83484.1 | MF775684_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 787 | 2409 |
| ATE83507.1 | MF775684_p25 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 18737 | 18916 |
| ATE83515.1 | MF775684_p33 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 21075 | 21317 |
| ATE83513.1 | MF775684_p31 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20232 | 20351 |
| ATE83532.1 | MF775684_p50 | hypothetical protein | phrog_6866 | unknown function | unknown function | 1 | 28076 | 28195 |
| ATE83517.1 | MF775684_p35 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 21611 | 21913 |
| ATE83503.1 | MF775684_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 17145 | 17498 |
| ATE83534.1 | MF775684_p52 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 28644 | 28772 |
| ATE83526.1 | MF775684_p44 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25184 | 25456 |
| ATE83521.1 | MF775684_p39 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 23157 | 23516 |
| ATE83514.1 | MF775684_p32 | methylase | phrog_1071 | DNA methyltransferase | other | -1 | 20357 | 21019 |
| ATE83522.1 | MF775684_p40 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 23520 | 24143 |
| ATE83483.1 | MF775684_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 262 | 786 |
| ATE83520.1 | MF775684_p38 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 22929 | 23144 |
| ATE83501.1 | MF775684_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 16046 | 16339 |
| ATE83494.1 | MF775684_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8866 | 9771 |
| ATE83497.1 | MF775684_p15 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 10771 | 11283 |
| ATE83496.1 | MF775684_p14 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 10476 | 10751 |
| ATE83504.1 | MF775684_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 17495 | 18199 |
| ATE83523.1 | MF775684_p41 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 24140 | 24640 |
| ATE83485.1 | MF775684_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2399 | 2683 |
| ATE83528.1 | MF775684_p46 | hypothetical protein | phrog_1284 | unknown function | unknown function | -1 | 25555 | 26502 |
| ATE83529.1 | MF775684_p47 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 26489 | 26926 |
| ATE83499.1 | MF775684_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 14033 | 14929 |
| ATE83488.1 | MF775684_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4342 | 5523 |
| ATE83537.1 | MF775684_p55 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 29384 | 29551 |
| ATE83511.1 | MF775684_p29 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19596 | 19850 |
| ATE83498.1 | MF775684_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11283 | 14033 |
| ATE83525.1 | MF775684_p43 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 24847 | 25137 |
| ATE83492.1 | MF775684_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6450 | 6815 |
| ATE83530.1 | MF775684_p48 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 27063 | 27284 |
| ATE83489.1 | MF775684_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5544 | 5807 |
| ATE83502.1 | MF775684_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16329 | 17123 |
| ATE83500.1 | MF775684_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 14929 | 16056 |
| ATE83524.1 | MF775684_p42 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 24627 | 24893 |
| ATE83531.1 | MF775684_p49 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 27780 | 27899 |
| ATE83535.1 | MF775684_p53 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 28777 | 28908 |
| ATE83493.1 | MF775684_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6872 | 8842 |
| ATE83533.1 | MF775684_p51 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 28326 | 28514 |
| ATE83527.1 | MF775684_p45 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 25440 | 25562 |
| ATE83505.1 | MF775684_p23 | lytic transglycosylase | phrog_3775 | transglycosylase | other | -1 | 18251 | 18412 |
| ATE83512.1 | MF775684_p30 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 19924 | 20232 |
| ATE83508.1 | MF775684_p26 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18913 | 19260 |