Genomic map of Lactococcus phage LP9801 (MF775684)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775684
Definition
Lactococcus phage LP9801, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30204
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
34.85
Number of singletons
0
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83509.1 MF775684_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19260 19427
ATE83486.1 MF775684_p4 portal protein phrog_12 portal protein head and packaging 1 2696 3832
ATE83506.1 MF775684_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18474 18740
ATE83487.1 MF775684_p5 protease phrog_80 head maturation protease head and packaging 1 3813 4349
ATE83491.1 MF775684_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6118 6459
ATE83510.1 MF775684_p28 hypothetical protein phrog_1820 unknown function unknown function -1 19427 19603
ATE83519.1 MF775684_p37 hypothetical protein phrog_1317 unknown function unknown function -1 22420 22932
ATE83518.1 MF775684_p36 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 21910 22335
ATE83536.1 MF775684_p54 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28905 29387
ATE83490.1 MF775684_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5807 6121
ATE83516.1 MF775684_p34 hypothetical protein phrog_4582 unknown function unknown function -1 21403 21576
ATE83495.1 MF775684_p12 major tail protein extension phrog_3791 major tail protein tail 1 8866 10456
ATE83484.1 MF775684_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 787 2409
ATE83507.1 MF775684_p25 hypothetical protein phrog_3389 unknown function unknown function -1 18737 18916
ATE83515.1 MF775684_p33 hypothetical protein phrog_1825 DNA methyltransferase other -1 21075 21317
ATE83513.1 MF775684_p31 hypothetical protein phrog_1508 unknown function unknown function -1 20232 20351
ATE83532.1 MF775684_p50 hypothetical protein phrog_6866 unknown function unknown function 1 28076 28195
ATE83517.1 MF775684_p35 hypothetical protein phrog_1919 unknown function unknown function -1 21611 21913
ATE83503.1 MF775684_p21 holin phrog_1379 unknown function unknown function 1 17145 17498
ATE83534.1 MF775684_p52 hypothetical protein phrog_1952 unknown function unknown function 1 28644 28772
ATE83526.1 MF775684_p44 hypothetical protein phrog_1405 unknown function unknown function -1 25184 25456
ATE83521.1 MF775684_p39 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23157 23516
ATE83514.1 MF775684_p32 methylase phrog_1071 DNA methyltransferase other -1 20357 21019
ATE83522.1 MF775684_p40 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23520 24143
ATE83483.1 MF775684_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 262 786
ATE83520.1 MF775684_p38 hypothetical protein phrog_1295 unknown function unknown function -1 22929 23144
ATE83501.1 MF775684_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16046 16339
ATE83494.1 MF775684_p13 major tail protein phrog_1433 major tail protein tail 1 8866 9771
ATE83497.1 MF775684_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10771 11283
ATE83496.1 MF775684_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10476 10751
ATE83504.1 MF775684_p22 lysin phrog_670 endolysin lysis 1 17495 18199
ATE83523.1 MF775684_p41 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24140 24640
ATE83485.1 MF775684_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2399 2683
ATE83528.1 MF775684_p46 hypothetical protein phrog_1284 unknown function unknown function -1 25555 26502
ATE83529.1 MF775684_p47 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26489 26926
ATE83499.1 MF775684_p17 distal tail protein phrog_1424 tail protein tail 1 14033 14929
ATE83488.1 MF775684_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4342 5523
ATE83537.1 MF775684_p55 hypothetical protein phrog_1652 unknown function unknown function 1 29384 29551
ATE83511.1 MF775684_p29 hypothetical protein phrog_1509 unknown function unknown function -1 19596 19850
ATE83498.1 MF775684_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11283 14033
ATE83525.1 MF775684_p43 hypothetical protein phrog_1632 unknown function unknown function -1 24847 25137
ATE83492.1 MF775684_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6450 6815
ATE83530.1 MF775684_p48 hypothetical protein phrog_2541 unknown function unknown function -1 27063 27284
ATE83489.1 MF775684_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5544 5807
ATE83502.1 MF775684_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16329 17123
ATE83500.1 MF775684_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14929 16056
ATE83524.1 MF775684_p42 hypothetical protein phrog_1449 unknown function unknown function -1 24627 24893
ATE83531.1 MF775684_p49 hypothetical protein phrog_2413 unknown function unknown function -1 27780 27899
ATE83535.1 MF775684_p53 hypothetical protein phrog_1436 unknown function unknown function 1 28777 28908
ATE83493.1 MF775684_p11 neck passage structure phrog_2370 neck passage structure connector 1 6872 8842
ATE83533.1 MF775684_p51 hypothetical protein phrog_1656 unknown function unknown function -1 28326 28514
ATE83527.1 MF775684_p45 hypothetical protein phrog_3604 unknown function unknown function -1 25440 25562
ATE83505.1 MF775684_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18251 18412
ATE83512.1 MF775684_p30 hypothetical protein phrog_1225 unknown function unknown function -1 19924 20232
ATE83508.1 MF775684_p26 hypothetical protein phrog_1415 unknown function unknown function -1 18913 19260