Genomic map of Lactococcus phage LP9908 (MF775686)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775686
Definition
Lactococcus phage LP9908, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
29668
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
34.82
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83624.1 MF775686_p33 hypothetical protein phrog_1825 DNA methyltransferase other -1 21065 21307
ATE83619.1 MF775686_p28 hypothetical protein phrog_1820 unknown function unknown function -1 19417 19593
ATE83623.1 MF775686_p32 methylase phrog_1071 DNA methyltransferase other -1 20347 21009
ATE83631.1 MF775686_p40 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 23509 24063
ATE83635.1 MF775686_p44 hypothetical protein phrog_1405 unknown function unknown function -1 25104 25367
ATE83640.1 MF775686_p49 hypothetical protein phrog_1656 unknown function unknown function -1 27793 27981
ATE83641.1 MF775686_p50 hypothetical protein phrog_5027 unknown function unknown function 1 28012 28239
ATE83638.1 MF775686_p47 hypothetical protein phrog_2541 unknown function unknown function -1 26504 26725
ATE83599.1 MF775686_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5797 6111
ATE83610.1 MF775686_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16036 16329
ATE83601.1 MF775686_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6440 6805
ATE83629.1 MF775686_p38 hypothetical protein phrog_1295 unknown function unknown function -1 22919 23134
ATE83633.1 MF775686_p42 hypothetical protein phrog_1449 unknown function unknown function -1 24547 24813
ATE83602.1 MF775686_p11 neck passage structure phrog_2370 neck passage structure connector 1 6862 8832
ATE83606.1 MF775686_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10761 11273
ATE83605.1 MF775686_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10466 10741
ATE83597.1 MF775686_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4332 5513
ATE83632.1 MF775686_p41 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24060 24560
ATE83621.1 MF775686_p30 hypothetical protein phrog_1225 unknown function unknown function -1 19914 20222
ATE83642.1 MF775686_p51 hypothetical protein phrog_1436 unknown function unknown function 1 28244 28375
ATE83630.1 MF775686_p39 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23147 23506
ATE83596.1 MF775686_p5 protease phrog_80 head maturation protease head and packaging 1 3803 4339
ATE83628.1 MF775686_p37 hypothetical protein phrog_1317 unknown function unknown function -1 22410 22922
ATE83612.1 MF775686_p21 holin phrog_1379 unknown function unknown function 1 17135 17488
ATE83634.1 MF775686_p43 hypothetical protein phrog_1632 unknown function unknown function -1 24767 25057
ATE83617.1 MF775686_p26 hypothetical protein phrog_1415 unknown function unknown function -1 18903 19250
ATE83625.1 MF775686_p34 hypothetical protein phrog_4582 unknown function unknown function -1 21393 21566
ATE83620.1 MF775686_p29 hypothetical protein phrog_1509 unknown function unknown function -1 19586 19840
ATE83603.1 MF775686_p13 major tail protein phrog_1433 major tail protein tail 1 8856 9761
ATE83613.1 MF775686_p22 lysin phrog_670 endolysin lysis 1 17485 18189
ATE83611.1 MF775686_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16319 17113
ATE83627.1 MF775686_p36 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 21900 22337
ATE83592.1 MF775686_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
ATE83618.1 MF775686_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19250 19417
ATE83604.1 MF775686_p12 major tail protein extension phrog_3791 major tail protein tail 1 8856 10446
ATE83644.1 MF775686_p53 hypothetical protein phrog_1652 unknown function unknown function 1 28851 29018
ATE83595.1 MF775686_p4 portal protein phrog_12 portal protein head and packaging 1 2686 3822
ATE83616.1 MF775686_p25 hypothetical protein phrog_3389 unknown function unknown function -1 18727 18906
ATE83622.1 MF775686_p31 hypothetical protein phrog_1508 unknown function unknown function -1 20222 20341
ATE83608.1 MF775686_p17 distal tail protein phrog_1424 tail protein tail 1 14023 14919
ATE83594.1 MF775686_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2389 2673
ATE83607.1 MF775686_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11273 14023
ATE83636.1 MF775686_p45 hypothetical protein phrog_3604 unknown function unknown function -1 25339 25521
ATE83626.1 MF775686_p35 hypothetical protein phrog_1919 unknown function unknown function -1 21601 21903
ATE83593.1 MF775686_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 777 2399
ATE83643.1 MF775686_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28372 28854
ATE83600.1 MF775686_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6108 6449
ATE83598.1 MF775686_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5534 5797
ATE83615.1 MF775686_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18464 18730
ATE83639.1 MF775686_p48 hypothetical protein phrog_2413 unknown function unknown function -1 27221 27340
ATE83609.1 MF775686_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14919 16046
ATE83637.1 MF775686_p46 hypothetical protein phrog_1284 unknown function unknown function -1 25514 26410
ATE83614.1 MF775686_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18241 18402