Genomic map of Lactococcus phage LP0109 (MF775691)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775691
Definition
Lactococcus phage LP0109, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30537
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
34.82
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83851.1 MF775691_p41 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24373 24996
ATE83830.1 MF775691_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16329 17123
ATE83818.1 MF775691_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5807 6121
ATE83847.1 MF775691_p37 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 22760 23185
ATE83832.1 MF775691_p22 lysin phrog_670 endolysin lysis 1 17495 18199
ATE83817.1 MF775691_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5544 5807
ATE83821.1 MF775691_p11 neck passage structure phrog_2370 neck passage structure connector 1 6872 8842
ATE83848.1 MF775691_p38 hypothetical protein phrog_1317 unknown function unknown function -1 23270 23782
ATE83850.1 MF775691_p40 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24010 24369
ATE83856.1 MF775691_p46 hypothetical protein phrog_1284 unknown function unknown function -1 25911 26858
ATE83828.1 MF775691_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14929 16056
ATE83813.1 MF775691_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2399 2683
ATE83816.1 MF775691_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4342 5523
ATE83862.1 MF775691_p52 hypothetical protein phrog_1436 unknown function unknown function 1 29116 29247
ATE83849.1 MF775691_p39 hypothetical protein phrog_1295 unknown function unknown function -1 23779 23994
ATE83861.1 MF775691_p51 hypothetical protein phrog_5027 unknown function unknown function 1 28884 29111
ATE83819.1 MF775691_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6118 6459
ATE83845.1 MF775691_p35 hypothetical protein phrog_4582 unknown function unknown function -1 22253 22426
ATE83827.1 MF775691_p17 distal tail protein phrog_1424 tail protein tail 1 14033 14929
ATE83857.1 MF775691_p47 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 26845 27282
ATE83811.1 MF775691_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 262 786
ATE83842.1 MF775691_p32 methylase phrog_1071 DNA methyltransferase other -1 20318 20980
ATE83837.1 MF775691_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19260 19427
ATE83843.1 MF775691_p33 methylase phrog_56 DNA methyltransferase other -1 21036 21926
ATE83860.1 MF775691_p50 hypothetical protein phrog_1656 unknown function unknown function -1 28665 28853
ATE83815.1 MF775691_p5 protease phrog_80 head maturation protease head and packaging 1 3813 4349
ATE83853.1 MF775691_p43 hypothetical protein phrog_1632 unknown function unknown function -1 25203 25493
ATE83846.1 MF775691_p36 hypothetical protein phrog_1919 unknown function unknown function -1 22461 22763
ATE83825.1 MF775691_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10771 11283
ATE83863.1 MF775691_p53 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29244 29726
ATE83814.1 MF775691_p4 portal protein phrog_12 portal protein head and packaging 1 2696 3832
ATE83855.1 MF775691_p45 hypothetical protein phrog_3604 unknown function unknown function -1 25796 25918
ATE83824.1 MF775691_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10476 10751
ATE83831.1 MF775691_p21 holin phrog_1379 unknown function unknown function 1 17145 17498
ATE83833.1 MF775691_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18251 18412
ATE83852.1 MF775691_p42 hypothetical protein phrog_1449 unknown function unknown function -1 24983 25249
ATE83820.1 MF775691_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6450 6815
ATE83858.1 MF775691_p48 hypothetical protein phrog_2541 unknown function unknown function -1 27419 27640
ATE83835.1 MF775691_p25 hypothetical protein phrog_3389 unknown function unknown function -1 18737 18916
ATE83829.1 MF775691_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16046 16339
ATE83834.1 MF775691_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18474 18740
ATE83823.1 MF775691_p12 major tail protein extension phrog_3791 major tail protein tail 1 8866 10456
ATE83864.1 MF775691_p54 hypothetical protein phrog_1652 unknown function unknown function 1 29723 29890
ATE83839.1 MF775691_p29 hypothetical protein phrog_2530 unknown function unknown function -1 19617 19865
ATE83836.1 MF775691_p26 hypothetical protein phrog_1415 unknown function unknown function -1 18913 19260
ATE83822.1 MF775691_p13 major tail protein phrog_1433 major tail protein tail 1 8866 9771
ATE83838.1 MF775691_p28 hypothetical protein phrog_1820 unknown function unknown function -1 19427 19615
ATE83859.1 MF775691_p49 hypothetical protein phrog_2413 unknown function unknown function -1 28135 28254
ATE83826.1 MF775691_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11283 14033
ATE83841.1 MF775691_p31 hypothetical protein phrog_1508 unknown function unknown function -1 20193 20312
ATE83854.1 MF775691_p44 hypothetical protein phrog_1405 unknown function unknown function -1 25546 25812
ATE83844.1 MF775691_p34 hypothetical protein phrog_1825 DNA methyltransferase other -1 21919 22167
ATE83840.1 MF775691_p30 hypothetical protein phrog_1225 unknown function unknown function -1 19885 20193
ATE83812.1 MF775691_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 787 2409