Genomic map of Lactococcus phage LP0202 (MF775692)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775692
Definition
Lactococcus phage LP0202, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30236
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
34.93
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83916.1 MF775692_p52 hypothetical protein phrog_1436 unknown function unknown function 1 28813 28944
ATE83867.1 MF775692_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2389 2673
ATE83887.1 MF775692_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18241 18402
ATE83883.1 MF775692_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16036 16329
ATE83869.1 MF775692_p5 protease phrog_80 head maturation protease head and packaging 1 3803 4339
ATE83904.1 MF775692_p40 hypothetical protein phrog_1295 unknown function unknown function -1 24059 24274
ATE83885.1 MF775692_p21 holin phrog_1379 unknown function unknown function 1 17135 17488
ATE83882.1 MF775692_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14919 16046
ATE83876.1 MF775692_p13 major tail protein phrog_1433 major tail protein tail 1 8856 9761
ATE83890.1 MF775692_p26 hypothetical protein phrog_1415 unknown function unknown function -1 18903 19250
ATE83900.1 MF775692_p36 hypothetical protein phrog_4582 unknown function unknown function -1 22533 22706
ATE83902.1 MF775692_p38 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23040 23477
ATE83881.1 MF775692_p17 distal tail protein phrog_1424 tail protein tail 1 14023 14919
ATE83889.1 MF775692_p25 hypothetical protein phrog_3389 unknown function unknown function -1 18727 18906
ATE83891.1 MF775692_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19250 19417
ATE83906.1 MF775692_p42 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24653 25276
ATE83917.1 MF775692_p53 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28941 29423
ATE83884.1 MF775692_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16319 17113
ATE83915.1 MF775692_p51 hypothetical protein phrog_5027 unknown function unknown function 1 28581 28808
ATE83903.1 MF775692_p39 hypothetical protein phrog_1317 unknown function unknown function -1 23550 24062
ATE83905.1 MF775692_p41 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24290 24649
ATE83918.1 MF775692_p54 hypothetical protein phrog_1652 unknown function unknown function 1 29420 29587
ATE83898.1 MF775692_p34 methylase phrog_56 DNA methyltransferase other -1 21298 22206
ATE83911.1 MF775692_p47 hypothetical protein phrog_2541 unknown function unknown function -1 27120 27341
ATE83896.1 MF775692_p32 hypothetical protein phrog_1508 unknown function unknown function -1 20455 20574
ATE83901.1 MF775692_p37 hypothetical protein phrog_1919 unknown function unknown function -1 22741 23043
ATE83909.1 MF775692_p45 hypothetical protein phrog_1405 unknown function unknown function -1 25826 26083
ATE83873.1 MF775692_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6108 6449
ATE83907.1 MF775692_p43 hypothetical protein phrog_1449 unknown function unknown function -1 25263 25529
ATE83879.1 MF775692_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10761 11273
ATE83899.1 MF775692_p35 hypothetical protein phrog_1825 DNA methyltransferase other -1 22199 22447
ATE83886.1 MF775692_p22 lysin phrog_670 endolysin lysis 1 17485 18189
ATE83877.1 MF775692_p12 major tail protein extension phrog_3791 major tail protein tail 1 8856 10446
ATE83913.1 MF775692_p49 hypothetical protein phrog_15117 unknown function unknown function -1 27973 28101
ATE83868.1 MF775692_p4 portal protein phrog_12 portal protein head and packaging 1 2686 3822
ATE83914.1 MF775692_p50 hypothetical protein phrog_1656 unknown function unknown function -1 28362 28550
ATE83912.1 MF775692_p48 hypothetical protein phrog_2413 unknown function unknown function -1 27827 27997
ATE83871.1 MF775692_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5534 5797
ATE83880.1 MF775692_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11273 14023
ATE83897.1 MF775692_p33 methylase phrog_1071 DNA methyltransferase other -1 20580 21242
ATE83910.1 MF775692_p46 hypothetical protein phrog_1284 unknown function unknown function -1 26076 27026
ATE83874.1 MF775692_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6440 6805
ATE83878.1 MF775692_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10466 10741
ATE83872.1 MF775692_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5797 6111
ATE83888.1 MF775692_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18464 18730
ATE83893.1 MF775692_p29 hypothetical protein phrog_1509 unknown function unknown function -1 19586 19822
ATE83908.1 MF775692_p44 hypothetical protein phrog_1632 unknown function unknown function -1 25483 25773
ATE83865.1 MF775692_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
ATE83894.1 MF775692_p30 hypothetical protein phrog_3365 unknown function unknown function -1 19884 20072
ATE83892.1 MF775692_p28 hypothetical protein phrog_1820 unknown function unknown function -1 19417 19593
ATE83895.1 MF775692_p31 hypothetical protein phrog_1225 unknown function unknown function -1 20147 20455
ATE83866.1 MF775692_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 777 2399
ATE83875.1 MF775692_p11 neck passage structure phrog_2370 neck passage structure connector 1 6862 8832
ATE83870.1 MF775692_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4332 5513