Genomic map of Lactococcus phage LP0209 (MF775693)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775693
Definition
Lactococcus phage LP0209, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30339
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
34.76
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83927.1 MF775693_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6108 6449
ATE83936.1 MF775693_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14919 16046
ATE83939.1 MF775693_p21 holin phrog_1379 unknown function unknown function 1 17135 17488
ATE83962.1 MF775693_p44 hypothetical protein phrog_1632 unknown function unknown function -1 25498 25788
ATE83951.1 MF775693_p33 methylase phrog_1071 DNA methyltransferase other -1 20592 21254
ATE83953.1 MF775693_p35 hypothetical protein phrog_1825 DNA methyltransferase other -1 22211 22459
ATE83950.1 MF775693_p32 hypothetical protein phrog_1508 unknown function unknown function -1 20467 20586
ATE83948.1 MF775693_p30 hypothetical protein phrog_3365 unknown function unknown function -1 19896 20084
ATE83932.1 MF775693_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10466 10741
ATE83971.1 MF775693_p53 hypothetical protein phrog_1652 unknown function unknown function 1 29523 29690
ATE83938.1 MF775693_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16319 17113
ATE83930.1 MF775693_p13 major tail protein phrog_1433 major tail protein tail 1 8856 9761
ATE83947.1 MF775693_p29 hypothetical protein phrog_1509 unknown function unknown function -1 19598 19834
ATE83935.1 MF775693_p17 distal tail protein phrog_1424 tail protein tail 1 14023 14919
ATE83949.1 MF775693_p31 hypothetical protein phrog_1225 unknown function unknown function -1 20159 20467
ATE83958.1 MF775693_p40 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23878 24237
ATE83926.1 MF775693_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5797 6111
ATE83954.1 MF775693_p36 hypothetical protein phrog_4582 unknown function unknown function -1 22545 22718
ATE83933.1 MF775693_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10761 11273
ATE83959.1 MF775693_p41 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24241 24795
ATE83929.1 MF775693_p11 neck passage structure phrog_2370 neck passage structure connector 1 6862 8832
ATE83961.1 MF775693_p43 hypothetical protein phrog_1449 unknown function unknown function -1 25278 25544
ATE83924.1 MF775693_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4332 5513
ATE83921.1 MF775693_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2389 2673
ATE83963.1 MF775693_p45 hypothetical protein phrog_1405 unknown function unknown function -1 25841 26098
ATE83967.1 MF775693_p49 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 28152 28643
ATE83928.1 MF775693_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6440 6805
ATE83966.1 MF775693_p48 hypothetical protein phrog_2413 unknown function unknown function -1 27796 27915
ATE83965.1 MF775693_p47 hypothetical protein phrog_2541 unknown function unknown function -1 27081 27302
ATE83942.1 MF775693_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18464 18730
ATE83920.1 MF775693_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 777 2399
ATE83957.1 MF775693_p39 hypothetical protein phrog_1295 unknown function unknown function -1 23647 23862
ATE83934.1 MF775693_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11273 14023
ATE83931.1 MF775693_p12 major tail protein extension phrog_3791 major tail protein tail 1 8856 10446
ATE83970.1 MF775693_p52 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29044 29526
ATE83946.1 MF775693_p28 hypothetical protein phrog_1820 unknown function unknown function -1 19417 19605
ATE83964.1 MF775693_p46 hypothetical protein phrog_1284 unknown function unknown function -1 26091 26987
ATE83952.1 MF775693_p34 methylase phrog_56 DNA methyltransferase other -1 21310 22218
ATE83922.1 MF775693_p4 portal protein phrog_12 portal protein head and packaging 1 2686 3822
ATE83941.1 MF775693_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18241 18402
ATE83919.1 MF775693_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
ATE83945.1 MF775693_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19250 19417
ATE83937.1 MF775693_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16036 16329
ATE83940.1 MF775693_p22 lysin phrog_670 endolysin lysis 1 17485 18189
ATE83923.1 MF775693_p5 protease phrog_80 head maturation protease head and packaging 1 3803 4339
ATE83960.1 MF775693_p42 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24782 25291
ATE83925.1 MF775693_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5534 5797
ATE83956.1 MF775693_p38 hypothetical protein phrog_1317 unknown function unknown function -1 23138 23650
ATE83968.1 MF775693_p50 hypothetical protein phrog_1952 unknown function unknown function 1 28783 28911
ATE83944.1 MF775693_p26 hypothetical protein phrog_1415 unknown function unknown function -1 18903 19250
ATE83943.1 MF775693_p25 hypothetical protein phrog_3389 unknown function unknown function -1 18727 18906
ATE83969.1 MF775693_p51 hypothetical protein phrog_1436 unknown function unknown function 1 28916 29047
ATE83955.1 MF775693_p37 hypothetical protein phrog_1919 unknown function unknown function -1 22753 23055