Genomic map of Lactococcus phage LP0212 (MF775694)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775694
Definition
Lactococcus phage LP0212, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
29916
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
34.76
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE83979.1 MF775694_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5797 6111
ATE83991.1 MF775694_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16319 17113
ATE83980.1 MF775694_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6108 6449
ATE84016.1 MF775694_p45 hypothetical protein phrog_1284 unknown function unknown function -1 25664 26560
ATE84001.1 MF775694_p30 hypothetical protein phrog_3365 unknown function unknown function -1 19896 20084
ATE83993.1 MF775694_p22 lysin phrog_670 endolysin lysis 1 17485 18189
ATE84007.1 MF775694_p36 hypothetical protein phrog_4582 unknown function unknown function -1 22545 22718
ATE84011.1 MF775694_p40 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23878 24237
ATE84023.1 MF775694_p52 hypothetical protein phrog_1652 unknown function unknown function 1 29096 29263
ATE83976.1 MF775694_p5 protease phrog_80 head maturation protease head and packaging 1 3803 4339
ATE84000.1 MF775694_p29 hypothetical protein phrog_1509 unknown function unknown function -1 19598 19834
ATE84017.1 MF775694_p46 hypothetical protein phrog_2541 unknown function unknown function -1 26654 26875
ATE83984.1 MF775694_p12 major tail protein extension phrog_3791 major tail protein tail 1 8856 10446
ATE83988.1 MF775694_p17 distal tail protein phrog_1424 tail protein tail 1 14023 14919
ATE84010.1 MF775694_p39 hypothetical protein phrog_1295 unknown function unknown function -1 23647 23862
ATE83997.1 MF775694_p26 hypothetical protein phrog_1415 unknown function unknown function -1 18903 19250
ATE83975.1 MF775694_p4 portal protein phrog_12 portal protein head and packaging 1 2686 3822
ATE83985.1 MF775694_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10466 10741
ATE84018.1 MF775694_p47 hypothetical protein phrog_2413 unknown function unknown function -1 27369 27488
ATE83992.1 MF775694_p21 holin phrog_1379 unknown function unknown function 1 17135 17488
ATE83998.1 MF775694_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19250 19417
ATE84009.1 MF775694_p38 hypothetical protein phrog_1317 unknown function unknown function -1 23138 23650
ATE84002.1 MF775694_p31 hypothetical protein phrog_1225 unknown function unknown function -1 20159 20467
ATE84005.1 MF775694_p34 methylase phrog_56 DNA methyltransferase other -1 21310 22218
ATE83981.1 MF775694_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6440 6805
ATE84019.1 MF775694_p48 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 27725 28216
ATE83996.1 MF775694_p25 hypothetical protein phrog_3389 unknown function unknown function -1 18727 18906
ATE83995.1 MF775694_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18464 18730
ATE84003.1 MF775694_p32 hypothetical protein phrog_1508 unknown function unknown function -1 20467 20586
ATE84013.1 MF775694_p42 hypothetical protein phrog_1449 unknown function unknown function -1 24851 25117
ATE83987.1 MF775694_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11273 14023
ATE83974.1 MF775694_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2389 2673
ATE83986.1 MF775694_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10761 11273
ATE84022.1 MF775694_p51 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28617 29099
ATE83972.1 MF775694_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
ATE84008.1 MF775694_p37 hypothetical protein phrog_1919 unknown function unknown function -1 22753 23055
ATE84020.1 MF775694_p49 hypothetical protein phrog_1952 unknown function unknown function 1 28356 28484
ATE83977.1 MF775694_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4332 5513
ATE83994.1 MF775694_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18241 18402
ATE84012.1 MF775694_p41 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24241 24864
ATE84006.1 MF775694_p35 hypothetical protein phrog_1825 DNA methyltransferase other -1 22211 22459
ATE83983.1 MF775694_p13 major tail protein phrog_1433 major tail protein tail 1 8856 9761
ATE83989.1 MF775694_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14919 16046
ATE84021.1 MF775694_p50 hypothetical protein phrog_1436 unknown function unknown function 1 28489 28620
ATE84015.1 MF775694_p44 hypothetical protein phrog_1405 unknown function unknown function -1 25414 25671
ATE83990.1 MF775694_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16036 16329
ATE83973.1 MF775694_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 777 2399
ATE84004.1 MF775694_p33 methylase phrog_1071 DNA methyltransferase other -1 20592 21254
ATE84014.1 MF775694_p43 hypothetical protein phrog_1632 unknown function unknown function -1 25071 25361
ATE83978.1 MF775694_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5534 5797
ATE83999.1 MF775694_p28 hypothetical protein phrog_1820 unknown function unknown function -1 19417 19605
ATE83982.1 MF775694_p11 neck passage structure phrog_2370 neck passage structure connector 1 6862 8832