Genomic map of Lactococcus phage LP0304 (MF775695)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775695
Definition
Lactococcus phage LP0304, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30344
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
54
%GC
34.88
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE84031.1 MF775695_p8 hypothetical protein phrog_1429 virion structural protein head and packaging 1 5797 6111
ATE84047.1 MF775695_p24 hypothetical protein phrog_1430 unknown function unknown function -1 18464 18730
ATE84028.1 MF775695_p5 protease phrog_80 head maturation protease head and packaging 1 3803 4339
ATE84068.1 MF775695_p45 hypothetical protein phrog_1405 unknown function unknown function -1 25902 26165
ATE84042.1 MF775695_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16036 16329
ATE84066.1 MF775695_p43 hypothetical protein phrog_1449 unknown function unknown function -1 25345 25611
ATE84046.1 MF775695_p23 lytic transglycosylase phrog_3775 transglycosylase other -1 18241 18402
ATE84037.1 MF775695_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10466 10741
ATE84077.1 MF775695_p54 hypothetical protein phrog_1652 unknown function unknown function 1 29524 29691
ATE84045.1 MF775695_p22 lysin phrog_670 endolysin lysis 1 17485 18189
ATE84055.1 MF775695_p32 hypothetical protein phrog_1508 unknown function unknown function -1 20467 20586
ATE84062.1 MF775695_p39 hypothetical protein phrog_1295 unknown function unknown function -1 23647 23862
ATE84058.1 MF775695_p35 hypothetical protein phrog_1825 DNA methyltransferase other -1 22211 22459
ATE84067.1 MF775695_p44 hypothetical protein phrog_1632 unknown function unknown function -1 25565 25855
ATE84041.1 MF775695_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 14919 16046
ATE84033.1 MF775695_p10 hypothetical protein phrog_1440 virion structural protein head and packaging 1 6440 6805
ATE84061.1 MF775695_p38 hypothetical protein phrog_1317 unknown function unknown function -1 23138 23650
ATE84030.1 MF775695_p7 hypothetical protein phrog_1428 head-tail connector protein connector 1 5534 5797
ATE84071.1 MF775695_p48 hypothetical protein phrog_2413 unknown function unknown function -1 27919 28038
ATE84075.1 MF775695_p52 hypothetical protein phrog_1436 unknown function unknown function 1 28917 29048
ATE84059.1 MF775695_p36 hypothetical protein phrog_4582 unknown function unknown function -1 22545 22718
ATE84074.1 MF775695_p51 hypothetical protein phrog_1952 unknown function unknown function 1 28784 28912
ATE84064.1 MF775695_p41 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24238 24861
ATE84044.1 MF775695_p21 holin phrog_1379 unknown function unknown function 1 17135 17488
ATE84060.1 MF775695_p37 hypothetical protein phrog_1919 unknown function unknown function -1 22753 23055
ATE84024.1 MF775695_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
ATE84065.1 MF775695_p42 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 24858 25358
ATE84036.1 MF775695_p12 major tail protein extension phrog_3791 major tail protein tail 1 8856 10446
ATE84072.1 MF775695_p49 hypothetical protein phrog_6866 unknown function unknown function 1 28188 28334
ATE84050.1 MF775695_p27 hypothetical protein phrog_1441 unknown function unknown function -1 19250 19417
ATE84054.1 MF775695_p31 hypothetical protein phrog_1225 unknown function unknown function -1 20159 20467
ATE84073.1 MF775695_p50 hypothetical protein phrog_1656 unknown function unknown function -1 28466 28654
ATE84035.1 MF775695_p13 major tail protein phrog_1433 major tail protein tail 1 8856 9761
ATE84070.1 MF775695_p47 hypothetical protein phrog_2541 unknown function unknown function -1 27202 27423
ATE84038.1 MF775695_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10761 11273
ATE84076.1 MF775695_p53 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 29045 29527
ATE84052.1 MF775695_p29 hypothetical protein phrog_1509 unknown function unknown function -1 19598 19834
ATE84048.1 MF775695_p25 hypothetical protein phrog_3389 unknown function unknown function -1 18727 18906
ATE84039.1 MF775695_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11273 14023
ATE84027.1 MF775695_p4 portal protein phrog_12 portal protein head and packaging 1 2686 3822
ATE84063.1 MF775695_p40 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 23875 24234
ATE84032.1 MF775695_p9 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6108 6449
ATE84053.1 MF775695_p30 hypothetical protein phrog_3365 unknown function unknown function -1 19896 20084
ATE84029.1 MF775695_p6 major capsid protein phrog_1393 minor head protein head and packaging 1 4332 5513
ATE84056.1 MF775695_p33 methylase phrog_1071 DNA methyltransferase other -1 20592 21254
ATE84057.1 MF775695_p34 methylase phrog_56 DNA methyltransferase other -1 21310 22218
ATE84026.1 MF775695_p3 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2389 2673
ATE84040.1 MF775695_p17 distal tail protein phrog_1424 tail protein tail 1 14023 14919
ATE84043.1 MF775695_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 16319 17113
ATE84069.1 MF775695_p46 hypothetical protein phrog_1284 unknown function unknown function -1 26158 27108
ATE84034.1 MF775695_p11 neck passage structure phrog_2370 neck passage structure connector 1 6862 8832
ATE84049.1 MF775695_p26 hypothetical protein phrog_1415 unknown function unknown function -1 18903 19250
ATE84025.1 MF775695_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 777 2399
ATE84051.1 MF775695_p28 hypothetical protein phrog_1820 unknown function unknown function -1 19417 19605