| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF775698 |
Definition |
Lactococcus phage LP0903, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus. |
DB of origin |
NUCCORE |
Length |
31049 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
54 |
%GC |
34.89 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATE84203.1 | MF775698_p18 | tail associated lysin | phrog_1432 | tail associated lysin | tail | 1 | 15405 | 16532 |
| ATE84209.1 | MF775698_p24 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18950 | 19216 |
| ATE84192.1 | MF775698_p7 | hypothetical protein | phrog_1428 | head-tail connector protein | connector | 1 | 5534 | 5797 |
| ATE84229.1 | MF775698_p44 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 25924 | 26181 |
| ATE84231.1 | MF775698_p46 | hypothetical protein | phrog_2541 | unknown function | unknown function | -1 | 27164 | 27385 |
| ATE84230.1 | MF775698_p45 | hypothetical protein | phrog_1284 | unknown function | unknown function | -1 | 26174 | 27070 |
| ATE84227.1 | MF775698_p42 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 25361 | 25627 |
| ATE84204.1 | MF775698_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 16522 | 16815 |
| ATE84214.1 | MF775698_p29 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 20084 | 20320 |
| ATE84193.1 | MF775698_p8 | hypothetical protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5797 | 6111 |
| ATE84201.1 | MF775698_p16 | tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 11273 | 14023 |
| ATE84219.1 | MF775698_p34 | methylase | phrog_56 | DNA methyltransferase | other | -1 | 21796 | 22728 |
| ATE84239.1 | MF775698_p54 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 30237 | 30404 |
| ATE84225.1 | MF775698_p40 | SSB protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 24388 | 24747 |
| ATE84202.1 | MF775698_p17 | distal tail protein | phrog_1424 | tail protein | tail | 1 | 14023 | 15405 |
| ATE84205.1 | MF775698_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 16805 | 17599 |
| ATE84197.1 | MF775698_p13 | major tail protein | phrog_1433 | major tail protein | tail | 1 | 8856 | 9761 |
| ATE84218.1 | MF775698_p33 | methylase | phrog_1071 | DNA methyltransferase | other | -1 | 21078 | 21740 |
| ATE84236.1 | MF775698_p51 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 29497 | 29625 |
| ATE84206.1 | MF775698_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 17621 | 17974 |
| ATE84216.1 | MF775698_p31 | hypothetical protein | phrog_1225 | unknown function | unknown function | -1 | 20645 | 20953 |
| ATE84235.1 | MF775698_p50 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 29178 | 29366 |
| ATE84238.1 | MF775698_p53 | holiday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 29758 | 30240 |
| ATE84215.1 | MF775698_p30 | hypothetical protein | phrog_3365 | unknown function | unknown function | -1 | 20382 | 20570 |
| ATE84190.1 | MF775698_p5 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3803 | 4339 |
| ATE84233.1 | MF775698_p48 | hypothetical protein | phrog_7549 | unknown function | unknown function | -1 | 27917 | 28162 |
| ATE84226.1 | MF775698_p41 | SAK protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 24751 | 25374 |
| ATE84186.1 | MF775698_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 252 | 776 |
| ATE84191.1 | MF775698_p6 | major capsid protein | phrog_1393 | minor head protein | head and packaging | 1 | 4332 | 5513 |
| ATE84237.1 | MF775698_p52 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 29630 | 29761 |
| ATE84189.1 | MF775698_p4 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2686 | 3822 |
| ATE84195.1 | MF775698_p10 | hypothetical protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6440 | 6805 |
| ATE84220.1 | MF775698_p35 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 22721 | 22969 |
| ATE84228.1 | MF775698_p43 | hypothetical protein | phrog_1632 | unknown function | unknown function | -1 | 25581 | 25871 |
| ATE84211.1 | MF775698_p26 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 19389 | 19736 |
| ATE84188.1 | MF775698_p3 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2389 | 2673 |
| ATE84234.1 | MF775698_p49 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 28682 | 28810 |
| ATE84232.1 | MF775698_p47 | repressor protein/antirepressor | phrog_2899 | anti-repressor Ant | transcription regulation | -1 | 27409 | 27870 |
| ATE84196.1 | MF775698_p11 | neck passage structure | phrog_2370 | neck passage structure | connector | 1 | 6862 | 8832 |
| ATE84198.1 | MF775698_p12 | major tail protein extension | phrog_3791 | major tail protein | tail | 1 | 8856 | 10446 |
| ATE84194.1 | MF775698_p9 | hypothetical protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6108 | 6449 |
| ATE84222.1 | MF775698_p37 | hypothetical protein | phrog_1919 | unknown function | unknown function | -1 | 23263 | 23565 |
| ATE84187.1 | MF775698_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 777 | 2399 |
| ATE84199.1 | MF775698_p14 | hypothetical protein | phrog_1420 | virion structural protein | head and packaging | 1 | 10466 | 10741 |
| ATE84208.1 | MF775698_p23 | lytic transglycosylase | phrog_3775 | transglycosylase | other | -1 | 18727 | 18888 |
| ATE84210.1 | MF775698_p25 | hypothetical protein | phrog_3389 | unknown function | unknown function | -1 | 19213 | 19392 |
| ATE84213.1 | MF775698_p28 | hypothetical protein | phrog_1820 | unknown function | unknown function | -1 | 19903 | 20091 |
| ATE84212.1 | MF775698_p27 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19736 | 19903 |
| ATE84223.1 | MF775698_p38 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 23648 | 24160 |
| ATE84224.1 | MF775698_p39 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 24157 | 24372 |
| ATE84221.1 | MF775698_p36 | hypothetical protein | phrog_4582 | unknown function | unknown function | -1 | 23055 | 23228 |
| ATE84200.1 | MF775698_p15 | hypothetical protein | phrog_1421 | virion structural protein | head and packaging | 1 | 10761 | 11273 |
| ATE84207.1 | MF775698_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 17971 | 18675 |
| ATE84217.1 | MF775698_p32 | hypothetical protein | phrog_1508 | unknown function | unknown function | -1 | 20953 | 21072 |