Genomic map of Lactococcus phage LP1502a (MF775703)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF775703
Definition
Lactococcus phage LP1502a, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus; unclassified Skunavirus.
DB of origin
NUCCORE
Length
30247
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
35.12
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATE84470.1 MF775703_p9 hypothetical protein phrog_1429 virion structural protein head and packaging 1 6554 6868
ATE84475.1 MF775703_p14 hypothetical protein phrog_1420 virion structural protein head and packaging 1 10589 10864
ATE84466.1 MF775703_p5 portal protein phrog_12 portal protein head and packaging 1 3443 4579
ATE84474.1 MF775703_p13 major tail protein phrog_1433 major tail protein tail 1 9646 10551
ATE84488.1 MF775703_p27 hypothetical protein phrog_1430 unknown function unknown function -1 20289 20558
ATE84508.1 MF775703_p47 hypothetical protein phrog_12970 unknown function unknown function -1 27437 27634
ATE84499.1 MF775703_p38 hypothetical protein phrog_1317 unknown function unknown function -1 23613 24122
ATE84489.1 MF775703_p28 hypothetical protein phrog_1415 unknown function unknown function -1 20731 21078
ATE84486.1 MF775703_p25 hypothetical protein phrog_5087 unknown function unknown function -1 19735 19992
ATE84495.1 MF775703_p34 hypothetical protein phrog_1508 unknown function unknown function -1 22427 22546
ATE84497.1 MF775703_p36 hypothetical protein phrog_10825 unknown function unknown function -1 22849 23094
ATE84506.1 MF775703_p45 hypothetical protein phrog_1405 unknown function unknown function -1 26203 26466
ATE84505.1 MF775703_p44 hypothetical protein phrog_2228 unknown function unknown function -1 25772 26152
ATE84498.1 MF775703_p37 hypothetical protein singleton unknown function unknown function -1 23249 23533
ATE84512.1 MF775703_p51 holiday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28964 29443
ATE84478.1 MF775703_p17 distal tail protein phrog_1424 tail protein tail 1 14146 15606
ATE84492.1 MF775703_p31 hypothetical protein phrog_2530 unknown function unknown function -1 21423 21626
ATE84502.1 MF775703_p41 SAK protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 24711 25277
ATE84494.1 MF775703_p33 hypothetical protein phrog_1225 unknown function unknown function -1 22119 22427
ATE84496.1 MF775703_p35 hypothetical protein phrog_1825 DNA methyltransferase other -1 22604 22849
ATE84504.1 MF775703_p43 hypothetical protein phrog_1632 unknown function unknown function -1 25485 25775
ATE84471.1 MF775703_p10 hypothetical protein phrog_1484 virion structural protein head and packaging 1 6865 7206
ATE84503.1 MF775703_p42 hypothetical protein phrog_1449 unknown function unknown function -1 25274 25531
ATE84479.1 MF775703_p18 tail associated lysin phrog_1432 tail associated lysin tail 1 15606 16733
ATE84467.1 MF775703_p6 prohead protease phrog_80 head maturation protease head and packaging 1 4560 5096
ATE84472.1 MF775703_p11 hypothetical protein phrog_1440 virion structural protein head and packaging 1 7197 7562
ATE84483.1 MF775703_p22 lysin phrog_670 endolysin lysis 1 18179 18880
ATE84481.1 MF775703_p20 receptor binding protein phrog_6465 tail protein tail 1 17006 17815
ATE84485.1 MF775703_p24 lytic transglycosylase phrog_3874 transglycosylase other -1 19109 19693
ATE84482.1 MF775703_p21 holin phrog_1379 unknown function unknown function 1 17829 18182
ATE84487.1 MF775703_p26 hypothetical protein phrog_5152 unknown function unknown function -1 20020 20268
ATE84491.1 MF775703_p30 hypothetical protein phrog_1820 unknown function unknown function -1 21245 21394
ATE84463.1 MF775703_p2 site-specific DNA-methyltransferase phrog_67 DNA methyltransferase other 1 773 1522
ATE84501.1 MF775703_p40 SSB protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 24347 24706
ATE84480.1 MF775703_p19 hypothetical protein phrog_1434 unknown function unknown function 1 16723 17016
ATE84500.1 MF775703_p39 hypothetical protein phrog_1295 unknown function unknown function -1 24119 24334
ATE84510.1 MF775703_p49 hypothetical protein phrog_1952 unknown function unknown function 1 28703 28831
ATE84493.1 MF775703_p32 hypothetical protein phrog_1509 unknown function unknown function -1 21656 21913
ATE84476.1 MF775703_p15 hypothetical protein phrog_1421 virion structural protein head and packaging 1 10884 11396
ATE84465.1 MF775703_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 3146 3430
ATE84468.1 MF775703_p7 major capsid protein phrog_1393 minor head protein head and packaging 1 5089 6270
ATE84507.1 MF775703_p46 DNA polymerase phrog_1284 unknown function unknown function -1 26459 27355
ATE84509.1 MF775703_p48 hypothetical protein phrog_1656 unknown function unknown function -1 28392 28571
ATE84490.1 MF775703_p29 hypothetical protein phrog_1441 unknown function unknown function -1 21078 21245
ATE84484.1 MF775703_p23 hypothetical protein singleton unknown function unknown function -1 18979 19146
ATE84511.1 MF775703_p50 hypothetical protein phrog_1436 unknown function unknown function 1 28836 28967
ATE84462.1 MF775703_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 252 776
ATE84477.1 MF775703_p16 tape measure protein phrog_58 tail length tape measure protein tail 1 11396 14146
ATE84513.1 MF775703_p52 hypothetical protein phrog_1652 unknown function unknown function 1 29444 29611
ATE84473.1 MF775703_p12 neck passage structure phrog_2370 neck passage structure connector 1 7619 9622
ATE84464.1 MF775703_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1534 3156
ATE84469.1 MF775703_p8 hypothetical protein phrog_1428 head-tail connector protein connector 1 6291 6554