Genomic map of Lysinibacillus phage vB_LspM-01 (MF893271)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF893271
Definition
Lysinibacillus phage vB_LspM-01, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae.
DB of origin
NUCCORE
Length
50753
Host Name
Lysinibacillus sphaericus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
37.26
Number of singletons
43
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATN94314.1 MF893271_p51 hypothetical protein singleton unknown function unknown function 1 26142 26450
ATN94315.1 MF893271_p52 hypothetical protein singleton unknown function unknown function 1 26447 26614
ATN94281.1 MF893271_p17 hypothetical protein phrog_6 baseplate wedge subunit tail 1 10665 11843
ATN94276.1 MF893271_p12 hypothetical protein phrog_1517 endolysin lysis 1 8108 8695
ATN94325.1 MF893271_p62 DNA methyltransferase phrog_111 DNA methyltransferase other 1 34985 35455
ATN94308.1 MF893271_p45 hypothetical protein singleton unknown function unknown function 1 24475 24660
ATN94336.1 MF893271_p73 hypothetical protein singleton unknown function unknown function 1 39907 40143
ATN94320.1 MF893271_p57 minor structural protein singleton unknown function unknown function 1 31216 31491
ATN94333.1 MF893271_p70 hypothetical protein singleton unknown function unknown function 1 39036 39362
ATN94292.1 MF893271_p28 hypothetical protein singleton unknown function unknown function 1 17396 17791
ATN94291.1 MF893271_p27 hypothetical protein phrog_3674 unknown function unknown function 1 17232 17402
ATN94312.1 MF893271_p49 hypothetical protein singleton unknown function unknown function 1 25653 25844
ATN94271.1 MF893271_p6 hypothetical protein phrog_1232 tail terminator connector 1 2802 3299
ATN94275.1 MF893271_p11 tail tape measure protein phrog_58 tail length tape measure protein tail 1 5488 8100
ATN94285.1 MF893271_p21 holin singleton unknown function unknown function 1 14527 14760
ATN94272.1 MF893271_p8 hypothetical protein phrog_280 virion structural protein head and packaging 1 4378 4779
ATN94302.1 MF893271_p39 replication initiator/regulator phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 21638 22447
ATN94297.1 MF893271_p34 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 19307 19480
ATN94323.1 MF893271_p60 hypothetical protein singleton unknown function unknown function 1 33445 33768
ATN94339.1 MF893271_p76 preprotein translocase subunit singleton unknown function unknown function 1 40703 40921
ATN94316.1 MF893271_p53 membrane protein singleton unknown function unknown function 1 26617 26802
ATN94268.1 MF893271_p3 hypothetical protein singleton unknown function unknown function 1 1652 1939
ATN94346.1 MF893271_p83 head protein phrog_29 major head protein head and packaging 1 46253 47371
ATN94287.1 MF893271_p23 cro-repressor phrog_3 transcriptional repressor transcription regulation 1 15586 15789
ATN94305.1 MF893271_p42 enoddeoxyribonuclease phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 23103 23504
ATN94313.1 MF893271_p50 minor structural protein singleton unknown function unknown function 1 25841 26116
ATN94328.1 MF893271_p65 hypothetical protein singleton unknown function unknown function 1 37272 37721
ATN94304.1 MF893271_p41 hypothetical protein singleton unknown function unknown function 1 22880 23128
ATN94331.1 MF893271_p68 hypothetical protein singleton unknown function unknown function 1 38301 38819
ATN94282.1 MF893271_p18 hypothetical protein phrog_1160 baseplate protein tail 1 11840 12472
ATN94278.1 MF893271_p14 hypothetical protein phrog_196 baseplate hub tail 1 9102 9917
ATN94301.1 MF893271_p38 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 20857 21660
ATN94299.1 MF893271_p36 cation transporter singleton unknown function unknown function 1 20327 20620
ATN94310.1 MF893271_p47 hypothetical protein singleton unknown function unknown function 1 24942 25118
ATN94322.1 MF893271_p59 transposase phrog_309 terminase small subunit head and packaging 1 32816 33445
ATN94283.1 MF893271_p19 hypothetical protein singleton unknown function unknown function 1 12487 13887
ATN94280.1 MF893271_p16 hypothetical protein phrog_120 baseplate wedge subunit tail 1 10306 10665
ATN94342.1 MF893271_p79 portal protein phrog_64 portal protein head and packaging 1 42713 44302
ATN94344.1 MF893271_p81 hypothetical protein phrog_172 head scaffolding protein head and packaging 1 45168 45860
ATN94298.1 MF893271_p35 antirepressor protein phrog_130 anti-repressor Ant transcription regulation 1 19484 20200
ATN94326.1 MF893271_p63 ISL3 family transposase phrog_5749 transposase integration and excision 1 35460 36803
ATN94332.1 MF893271_p69 hypothetical protein singleton unknown function unknown function 1 38820 39032
ATN94306.1 MF893271_p43 hypothetical protein phrog_2851 unknown function unknown function 1 23541 23789
ATN94337.1 MF893271_p74 hypothetical protein singleton unknown function unknown function 1 40143 40382
ATN94343.1 MF893271_p80 SPP1 family head morphogenesis protein singleton unknown function unknown function 1 44271 45080
ATN94266.1 MF893271_p7 hypothetical protein phrog_205 tail sheath tail 1 3322 4359
ATN94284.1 MF893271_p20 hypothetical protein singleton unknown function unknown function 1 13955 14527
ATN94300.1 MF893271_p37 DNA-binding protein phrog_66 excisionase and transcriptional regulator integration and excision 1 20679 20855
ATN94295.1 MF893271_p32 hypothetical protein singleton unknown function unknown function 1 18766 18921
ATN94335.1 MF893271_p72 hypothetical protein singleton unknown function unknown function 1 39679 39861
ATN94318.1 MF893271_p55 hypothetical protein phrog_6730 unknown function unknown function 1 29689 30021
ATN94345.1 MF893271_p82 hypothetical protein phrog_909 major head protein head and packaging 1 45873 46238
ATN94329.1 MF893271_p66 hypothetical protein singleton unknown function unknown function 1 37733 38017
ATN94307.1 MF893271_p44 single strand DNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 23782 24357
ATN94303.1 MF893271_p40 peptidoglycan-binding lysin domain-containing protein phrog_3458 unknown function unknown function 1 22461 22667
ATN94274.1 MF893271_p10 hypothetical protein singleton unknown function unknown function 1 5231 5401
ATN94330.1 MF893271_p67 hypothetical protein singleton unknown function unknown function 1 38021 38308
ATN94273.1 MF893271_p9 hypothetical protein phrog_1778 unknown function unknown function 1 4861 5220
ATN94319.1 MF893271_p56 hypothetical protein singleton unknown function unknown function 1 30643 30867
ATN94311.1 MF893271_p48 hypothetical protein phrog_3356 transposase integration and excision 1 25105 25641
ATN94334.1 MF893271_p71 hypothetical protein singleton unknown function unknown function 1 39359 39682
ATN94349.1 MF893271_p30 tail protein singleton unknown function unknown function 1 18310 18492
ATN94340.1 MF893271_p77 terminase small subunit singleton unknown function unknown function 1 41009 41182
ATN94293.1 MF893271_p29 ERCC4 domain protein phrog_3490 ERCC4-type nuclease DNA, RNA and nucleotide metabolism 1 17792 18304
ATN94338.1 MF893271_p75 hypothetical protein singleton unknown function unknown function 1 40357 40671
ATN94294.1 MF893271_p31 hypothetical protein singleton unknown function unknown function 1 18572 18766
ATN94267.1 MF893271_p2 hypothetical protein singleton unknown function unknown function 1 1498 1683
ATN94289.1 MF893271_p25 hypothetical protein phrog_2205 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 16061 16621
ATN94347.1 MF893271_p84 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 48130 48924
ATN94286.1 MF893271_p22 endolysin-like protein phrog_6523 endolysin lysis 1 14757 15422
ATN94317.1 MF893271_p54 hypothetical protein singleton unknown function unknown function 1 27523 27741
ATN94296.1 MF893271_p33 TM2 domain-containing protein singleton unknown function unknown function 1 18921 19208
ATN94327.1 MF893271_p64 YopX-like protein phrog_98 unknown function unknown function 1 36873 37214
ATN94309.1 MF893271_p46 hypothetical protein singleton unknown function unknown function 1 24675 24932
ATN94269.1 MF893271_p4 morphogenesis protein phrog_222 tail completion or Neck1 protein connector 1 1936 2439
ATN94288.1 MF893271_p24 hypothetical protein singleton unknown function unknown function 1 15868 16089
ATN94348.1 MF893271_p1 baseplate wedge intiator singleton unknown function unknown function 1 49015 50753
ATN94348.1 MF893271_p1 baseplate wedge intiator singleton unknown function unknown function 1 1 49
ATN94270.1 MF893271_p5 hypothetical protein phrog_1661 unknown function unknown function 1 2426 2815
ATN94321.1 MF893271_p58 hypothetical protein singleton unknown function unknown function 1 31488 31826
ATN94324.1 MF893271_p61 hypothetical protein singleton unknown function unknown function 1 34463 34870
ATN94341.1 MF893271_p78 terminase large subunit protein phrog_38 terminase large subunit head and packaging 1 41240 42676
ATN94279.1 MF893271_p15 hypothetical protein phrog_11 baseplate spike tail 1 9929 10309
ATN94290.1 MF893271_p26 recombination protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 16618 17232
ATN94277.1 MF893271_p13 hypothetical protein phrog_1264 unknown function unknown function 1 8696 9058