| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF893271 |
Definition |
Lysinibacillus phage vB_LspM-01, complete genome. |
Molecule type |
DNA |
Genome structure |
circular |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae. |
DB of origin |
NUCCORE |
Length |
50753 |
Host Name |
Lysinibacillus sphaericus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
84 |
%GC |
37.26 |
Number of singletons |
43 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATN94314.1 | MF893271_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26142 | 26450 |
| ATN94315.1 | MF893271_p52 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26447 | 26614 |
| ATN94281.1 | MF893271_p17 | hypothetical protein | phrog_6 | baseplate wedge subunit | tail | 1 | 10665 | 11843 |
| ATN94276.1 | MF893271_p12 | hypothetical protein | phrog_1517 | endolysin | lysis | 1 | 8108 | 8695 |
| ATN94325.1 | MF893271_p62 | DNA methyltransferase | phrog_111 | DNA methyltransferase | other | 1 | 34985 | 35455 |
| ATN94308.1 | MF893271_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24475 | 24660 |
| ATN94336.1 | MF893271_p73 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39907 | 40143 |
| ATN94320.1 | MF893271_p57 | minor structural protein | singleton | unknown function | unknown function | 1 | 31216 | 31491 |
| ATN94333.1 | MF893271_p70 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39036 | 39362 |
| ATN94292.1 | MF893271_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17396 | 17791 |
| ATN94291.1 | MF893271_p27 | hypothetical protein | phrog_3674 | unknown function | unknown function | 1 | 17232 | 17402 |
| ATN94312.1 | MF893271_p49 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25653 | 25844 |
| ATN94271.1 | MF893271_p6 | hypothetical protein | phrog_1232 | tail terminator | connector | 1 | 2802 | 3299 |
| ATN94275.1 | MF893271_p11 | tail tape measure protein | phrog_58 | tail length tape measure protein | tail | 1 | 5488 | 8100 |
| ATN94285.1 | MF893271_p21 | holin | singleton | unknown function | unknown function | 1 | 14527 | 14760 |
| ATN94272.1 | MF893271_p8 | hypothetical protein | phrog_280 | virion structural protein | head and packaging | 1 | 4378 | 4779 |
| ATN94302.1 | MF893271_p39 | replication initiator/regulator | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 21638 | 22447 |
| ATN94297.1 | MF893271_p34 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 19307 | 19480 |
| ATN94323.1 | MF893271_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 33445 | 33768 |
| ATN94339.1 | MF893271_p76 | preprotein translocase subunit | singleton | unknown function | unknown function | 1 | 40703 | 40921 |
| ATN94316.1 | MF893271_p53 | membrane protein | singleton | unknown function | unknown function | 1 | 26617 | 26802 |
| ATN94268.1 | MF893271_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1652 | 1939 |
| ATN94346.1 | MF893271_p83 | head protein | phrog_29 | major head protein | head and packaging | 1 | 46253 | 47371 |
| ATN94287.1 | MF893271_p23 | cro-repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 15586 | 15789 |
| ATN94305.1 | MF893271_p42 | enoddeoxyribonuclease | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 23103 | 23504 |
| ATN94313.1 | MF893271_p50 | minor structural protein | singleton | unknown function | unknown function | 1 | 25841 | 26116 |
| ATN94328.1 | MF893271_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37272 | 37721 |
| ATN94304.1 | MF893271_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22880 | 23128 |
| ATN94331.1 | MF893271_p68 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38301 | 38819 |
| ATN94282.1 | MF893271_p18 | hypothetical protein | phrog_1160 | baseplate protein | tail | 1 | 11840 | 12472 |
| ATN94278.1 | MF893271_p14 | hypothetical protein | phrog_196 | baseplate hub | tail | 1 | 9102 | 9917 |
| ATN94301.1 | MF893271_p38 | hypothetical protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 20857 | 21660 |
| ATN94299.1 | MF893271_p36 | cation transporter | singleton | unknown function | unknown function | 1 | 20327 | 20620 |
| ATN94310.1 | MF893271_p47 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24942 | 25118 |
| ATN94322.1 | MF893271_p59 | transposase | phrog_309 | terminase small subunit | head and packaging | 1 | 32816 | 33445 |
| ATN94283.1 | MF893271_p19 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12487 | 13887 |
| ATN94280.1 | MF893271_p16 | hypothetical protein | phrog_120 | baseplate wedge subunit | tail | 1 | 10306 | 10665 |
| ATN94342.1 | MF893271_p79 | portal protein | phrog_64 | portal protein | head and packaging | 1 | 42713 | 44302 |
| ATN94344.1 | MF893271_p81 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 45168 | 45860 |
| ATN94298.1 | MF893271_p35 | antirepressor protein | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 19484 | 20200 |
| ATN94326.1 | MF893271_p63 | ISL3 family transposase | phrog_5749 | transposase | integration and excision | 1 | 35460 | 36803 |
| ATN94332.1 | MF893271_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38820 | 39032 |
| ATN94306.1 | MF893271_p43 | hypothetical protein | phrog_2851 | unknown function | unknown function | 1 | 23541 | 23789 |
| ATN94337.1 | MF893271_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40143 | 40382 |
| ATN94343.1 | MF893271_p80 | SPP1 family head morphogenesis protein | singleton | unknown function | unknown function | 1 | 44271 | 45080 |
| ATN94266.1 | MF893271_p7 | hypothetical protein | phrog_205 | tail sheath | tail | 1 | 3322 | 4359 |
| ATN94284.1 | MF893271_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13955 | 14527 |
| ATN94300.1 | MF893271_p37 | DNA-binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 20679 | 20855 |
| ATN94295.1 | MF893271_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18766 | 18921 |
| ATN94335.1 | MF893271_p72 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39679 | 39861 |
| ATN94318.1 | MF893271_p55 | hypothetical protein | phrog_6730 | unknown function | unknown function | 1 | 29689 | 30021 |
| ATN94345.1 | MF893271_p82 | hypothetical protein | phrog_909 | major head protein | head and packaging | 1 | 45873 | 46238 |
| ATN94329.1 | MF893271_p66 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37733 | 38017 |
| ATN94307.1 | MF893271_p44 | single strand DNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 23782 | 24357 |
| ATN94303.1 | MF893271_p40 | peptidoglycan-binding lysin domain-containing protein | phrog_3458 | unknown function | unknown function | 1 | 22461 | 22667 |
| ATN94274.1 | MF893271_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5231 | 5401 |
| ATN94330.1 | MF893271_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38021 | 38308 |
| ATN94273.1 | MF893271_p9 | hypothetical protein | phrog_1778 | unknown function | unknown function | 1 | 4861 | 5220 |
| ATN94319.1 | MF893271_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 30643 | 30867 |
| ATN94311.1 | MF893271_p48 | hypothetical protein | phrog_3356 | transposase | integration and excision | 1 | 25105 | 25641 |
| ATN94334.1 | MF893271_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39359 | 39682 |
| ATN94349.1 | MF893271_p30 | tail protein | singleton | unknown function | unknown function | 1 | 18310 | 18492 |
| ATN94340.1 | MF893271_p77 | terminase small subunit | singleton | unknown function | unknown function | 1 | 41009 | 41182 |
| ATN94293.1 | MF893271_p29 | ERCC4 domain protein | phrog_3490 | ERCC4-type nuclease | DNA, RNA and nucleotide metabolism | 1 | 17792 | 18304 |
| ATN94338.1 | MF893271_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40357 | 40671 |
| ATN94294.1 | MF893271_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18572 | 18766 |
| ATN94267.1 | MF893271_p2 | hypothetical protein | singleton | unknown function | unknown function | 1 | 1498 | 1683 |
| ATN94289.1 | MF893271_p25 | hypothetical protein | phrog_2205 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 16061 | 16621 |
| ATN94347.1 | MF893271_p84 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 48130 | 48924 |
| ATN94286.1 | MF893271_p22 | endolysin-like protein | phrog_6523 | endolysin | lysis | 1 | 14757 | 15422 |
| ATN94317.1 | MF893271_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27523 | 27741 |
| ATN94296.1 | MF893271_p33 | TM2 domain-containing protein | singleton | unknown function | unknown function | 1 | 18921 | 19208 |
| ATN94327.1 | MF893271_p64 | YopX-like protein | phrog_98 | unknown function | unknown function | 1 | 36873 | 37214 |
| ATN94309.1 | MF893271_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24675 | 24932 |
| ATN94269.1 | MF893271_p4 | morphogenesis protein | phrog_222 | tail completion or Neck1 protein | connector | 1 | 1936 | 2439 |
| ATN94288.1 | MF893271_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15868 | 16089 |
| ATN94348.1 | MF893271_p1 | baseplate wedge intiator | singleton | unknown function | unknown function | 1 | 49015 | 50753 |
| ATN94348.1 | MF893271_p1 | baseplate wedge intiator | singleton | unknown function | unknown function | 1 | 1 | 49 |
| ATN94270.1 | MF893271_p5 | hypothetical protein | phrog_1661 | unknown function | unknown function | 1 | 2426 | 2815 |
| ATN94321.1 | MF893271_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31488 | 31826 |
| ATN94324.1 | MF893271_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34463 | 34870 |
| ATN94341.1 | MF893271_p78 | terminase large subunit protein | phrog_38 | terminase large subunit | head and packaging | 1 | 41240 | 42676 |
| ATN94279.1 | MF893271_p15 | hypothetical protein | phrog_11 | baseplate spike | tail | 1 | 9929 | 10309 |
| ATN94290.1 | MF893271_p26 | recombination protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 16618 | 17232 |
| ATN94277.1 | MF893271_p13 | hypothetical protein | phrog_1264 | unknown function | unknown function | 1 | 8696 | 9058 |