Genomic map of Pseudomonas phage PPSC2 (MF893340)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF893340
Definition
Pseudomonas phage PPSC2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Otagovirus; unclassified Otagovirus.
DB of origin
NUCCORE
Length
97330
Host Name
Pseudomonas fluorescens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
168
%GC
47.5
Number of singletons
31
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATN92851.1 MF893340_p88 hypothetical protein singleton unknown function unknown function 1 53669 54118
ATN92780.1 MF893340_p17 hypothetical protein singleton unknown function unknown function 1 11589 11732
ATN92817.1 MF893340_p54 hypothetical protein phrog_7029 unknown function unknown function 1 36930 37166
ATN92857.1 MF893340_p94 hypothetical protein phrog_6076 unknown function unknown function 1 55781 55963
ATN92878.1 MF893340_p115 hypothetical protein singleton unknown function unknown function -1 66671 66868
ATN92887.1 MF893340_p124 hypothetical protein phrog_29136 unknown function unknown function 1 69355 70110
ATN92795.1 MF893340_p32 hypothetical protein phrog_3899 unknown function unknown function 1 25056 25379
ATN92908.1 MF893340_p145 ribose-phosphate pyrophosphokinase phrog_2071 ATPase other -1 82060 82452
ATN92770.1 MF893340_p7 major capsid protein phrog_29 major head protein head and packaging 1 5171 6229
ATN92872.1 MF893340_p109 hypothetical protein singleton unknown function unknown function 1 63443 63853
ATN92807.1 MF893340_p44 hypothetical protein singleton unknown function unknown function 1 29202 29417
ATN92802.1 MF893340_p39 hypothetical protein phrog_4256 unknown function unknown function 1 27502 27825
ATN92819.1 MF893340_p56 hypothetical protein phrog_1985 HNH endonuclease DNA, RNA and nucleotide metabolism 1 38249 38794
ATN92868.1 MF893340_p105 hypothetical protein phrog_1106 unknown function unknown function 1 61569 62243
ATN92890.1 MF893340_p127 hypothetical protein phrog_652 unknown function unknown function -1 71106 71558
ATN92805.1 MF893340_p42 hypothetical protein phrog_2529 unknown function unknown function 1 28505 28873
ATN92811.1 MF893340_p48 hypothetical protein phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 31801 34152
ATN92784.1 MF893340_p21 hypothetical protein phrog_196 baseplate hub tail 1 15226 16152
ATN92905.1 MF893340_p142 nicotinate phosphoribosyltransferase singleton unknown function unknown function -1 80057 80272
ATN92835.1 MF893340_p72 hypothetical protein phrog_35624 unknown function unknown function 1 47042 47662
ATN92779.1 MF893340_p16 hypothetical protein phrog_1613 tail assembly chaperone tail 1 11128 11490
ATN92928.1 MF893340_p165 hypothetical protein phrog_5019 unknown function unknown function -1 90712 91281
ATN92765.1 MF893340_p2 terminase large subunit phrog_979 terminase large subunit head and packaging 1 412 1881
ATN92824.1 MF893340_p61 hypothetical protein singleton unknown function unknown function 1 40613 40888
ATN92902.1 MF893340_p139 DNA recombination-mediator protein A phrog_6391 unknown function unknown function -1 77624 77773
ATN92858.1 MF893340_p95 hypothetical protein phrog_24648 unknown function unknown function 1 56014 56208
ATN92926.1 MF893340_p163 PhoH-like protein phrog_5067 unknown function unknown function -1 90154 90516
ATN92893.1 MF893340_p130 hypothetical protein phrog_5698 unknown function unknown function -1 72414 73013
ATN92929.1 MF893340_p166 hypothetical protein phrog_3900 unknown function unknown function 1 91985 92314
ATN92856.1 MF893340_p93 hypothetical protein singleton unknown function unknown function 1 55596 55712
ATN92791.1 MF893340_p28 lysozyme phrog_7 endolysin lysis 1 23357 23932
ATN92804.1 MF893340_p41 hypothetical protein phrog_4991 unknown function unknown function 1 28177 28416
ATN92870.1 MF893340_p107 hypothetical protein phrog_11435 unknown function unknown function 1 62572 62994
ATN92874.1 MF893340_p111 hypothetical protein singleton unknown function unknown function 1 64207 64437
ATN92772.1 MF893340_p9 hypothetical protein phrog_222 tail completion or Neck1 protein connector 1 6747 7208
ATN92810.1 MF893340_p47 KaiC phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 29940 31817
ATN92775.1 MF893340_p12 structural protein phrog_205 tail sheath tail 1 8165 9448
ATN92798.1 MF893340_p35 hypothetical protein phrog_33577 unknown function unknown function 1 26646 26873
ATN92917.1 MF893340_p154 hypothetical protein phrog_15470 unknown function unknown function -1 86697 86894
ATN92899.1 MF893340_p136 hypothetical protein phrog_11764 unknown function unknown function -1 76476 76790
ATN92821.1 MF893340_p58 hypothetical protein phrog_5822 unknown function unknown function 1 38989 39336
ATN92808.1 MF893340_p45 hypothetical protein phrog_12645 unknown function unknown function 1 29417 29749
ATN92888.1 MF893340_p125 hypothetical protein phrog_2650 unknown function unknown function -1 70343 70711
ATN92884.1 MF893340_p121 hypothetical protein singleton unknown function unknown function -1 68153 68266
ATN92861.1 MF893340_p98 hypothetical protein phrog_13300 unknown function unknown function 1 58650 58796
ATN92796.1 MF893340_p33 hypothetical protein singleton unknown function unknown function -1 25743 25946
ATN92886.1 MF893340_p123 hypothetical protein singleton unknown function unknown function 1 68984 69355
ATN92776.1 MF893340_p13 hypothetical protein phrog_280 virion structural protein head and packaging 1 9482 10006
ATN92897.1 MF893340_p134 hypothetical protein phrog_5890 tellurite resistance moron, auxiliary metabolic gene and host takeover -1 74804 75973
ATN92789.1 MF893340_p26 hypothetical protein phrog_2097 tail fiber protein tail 1 19497 21848
ATN92787.1 MF893340_p24 hypothetical protein phrog_6 baseplate wedge subunit tail 1 17283 18740
ATN92815.1 MF893340_p52 hypothetical protein phrog_2544 unknown function unknown function 1 35418 36434
ATN92843.1 MF893340_p80 hypothetical protein phrog_17937 unknown function unknown function 1 49655 50092
ATN92839.1 MF893340_p76 hypothetical protein phrog_32527 unknown function unknown function 1 48292 48501
ATN92828.1 MF893340_p65 ribonucleotide-diphosphate reductase beta subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 42858 43928
ATN92859.1 MF893340_p96 hypothetical protein phrog_5041 unknown function unknown function 1 56205 56402
ATN92885.1 MF893340_p122 hypothetical protein singleton unknown function unknown function -1 68268 68771
ATN92842.1 MF893340_p79 hypothetical protein phrog_23943 unknown function unknown function 1 49182 49628
ATN92783.1 MF893340_p20 hypothetical protein phrog_349 virion structural protein head and packaging 1 14879 15220
ATN92921.1 MF893340_p158 hypothetical protein phrog_14679 unknown function unknown function -1 87867 88193
ATN92813.1 MF893340_p50 hypothetical protein phrog_10599 unknown function unknown function 1 34429 34743
ATN92895.1 MF893340_p132 TerC family protein phrog_4074 unknown function unknown function -1 73770 74039
ATN92833.1 MF893340_p70 hypothetical protein phrog_12065 unknown function unknown function 1 46492 46830
ATN92889.1 MF893340_p126 hypothetical protein phrog_12309 unknown function unknown function -1 70713 70973
ATN92896.1 MF893340_p133 hypothetical protein phrog_5359 unknown function unknown function -1 74102 74779
ATN92830.1 MF893340_p67 hypothetical protein phrog_25682 unknown function unknown function 1 45702 46058
ATN92864.1 MF893340_p101 hypothetical protein phrog_4323 unknown function unknown function 1 59544 59684
ATN92771.1 MF893340_p8 hypothetical protein phrog_1732 unknown function unknown function 1 6281 6763
ATN92850.1 MF893340_p87 hypothetical protein phrog_13468 unknown function unknown function 1 53190 53657
ATN92882.1 MF893340_p119 hypothetical protein singleton unknown function unknown function -1 67619 67891
ATN92785.1 MF893340_p22 baseplate protein phrog_11 baseplate spike tail 1 16149 16913
ATN92901.1 MF893340_p138 hypothetical protein phrog_768 DprA-like DNA recombination-mediator protein DNA, RNA and nucleotide metabolism -1 77038 77616
ATN92922.1 MF893340_p159 hypothetical protein phrog_3948 unknown function unknown function -1 88190 88459
ATN92836.1 MF893340_p73 hypothetical protein phrog_32880 unknown function unknown function 1 47653 47868
ATN92919.1 MF893340_p156 cytidine and deoxycytidylate deaminase phrog_34443 unknown function unknown function -1 87453 87647
ATN92781.1 MF893340_p18 hypothetical protein phrog_991 tail length tape measure protein tail 1 11745 14102
ATN92907.1 MF893340_p144 hypothetical protein phrog_619 ribose-phosphate pyrophosphokinase other -1 81129 81998
ATN92803.1 MF893340_p40 hypothetical protein phrog_13035 unknown function unknown function 1 27834 28184
ATN92927.1 MF893340_p164 hypothetical protein singleton unknown function unknown function -1 90534 90722
ATN92916.1 MF893340_p153 DNA ligase phrog_11656 unknown function unknown function -1 86464 86700
ATN92766.1 MF893340_p3 hypothetical protein phrog_113 portal protein head and packaging 1 1891 3360
ATN92778.1 MF893340_p15 hypothetical protein phrog_280 virion structural protein head and packaging 1 10579 11112
ATN92800.1 MF893340_p37 hypothetical protein singleton unknown function unknown function 1 27084 27314
ATN92812.1 MF893340_p49 hypothetical protein singleton unknown function unknown function 1 34230 34412
ATN92777.1 MF893340_p14 hypothetical protein phrog_280 virion structural protein head and packaging 1 10120 10569
ATN92797.1 MF893340_p34 hypothetical protein phrog_464 unknown function unknown function 1 26331 26645
ATN92823.1 MF893340_p60 hypothetical protein phrog_28500 unknown function unknown function 1 40118 40393
ATN92904.1 MF893340_p141 macro domain protein phrog_448 nicotinamide phosphoribosyl transferase other -1 78306 80060
ATN92853.1 MF893340_p90 anti-sigma factor phrog_19964 membrane protein moron, auxiliary metabolic gene and host takeover 1 54574 54903
ATN92894.1 MF893340_p131 general stress protein 16U phrog_7180 membrane protein moron, auxiliary metabolic gene and host takeover -1 73081 73770
ATN92834.1 MF893340_p71 hypothetical protein singleton unknown function unknown function 1 46830 47045
ATN92930.1 MF893340_p167 hypothetical protein phrog_2143 unknown function unknown function 1 93697 94254
ATN92838.1 MF893340_p75 hypothetical protein phrog_899 unknown function unknown function 1 48086 48280
ATN92860.1 MF893340_p97 hypothetical protein phrog_12785 unknown function unknown function 1 57340 58584
ATN92801.1 MF893340_p38 hypothetical protein phrog_12336 unknown function unknown function 1 27311 27505
ATN92841.1 MF893340_p78 hypothetical protein phrog_899 unknown function unknown function 1 48908 49168
ATN92920.1 MF893340_p157 hypothetical protein phrog_10692 unknown function unknown function -1 87647 87853
ATN92873.1 MF893340_p110 hypothetical protein phrog_7884 unknown function unknown function 1 63917 64135
ATN92869.1 MF893340_p106 hypothetical protein singleton unknown function unknown function 1 62276 62461
ATN92855.1 MF893340_p92 hypothetical protein phrog_12713 unknown function unknown function 1 55326 55559
ATN92837.1 MF893340_p74 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 47862 48089
ATN92891.1 MF893340_p128 hypothetical protein phrog_10873 unknown function unknown function -1 71555 71827
ATN92840.1 MF893340_p77 hypothetical protein phrog_5658 pyrophosphatase other 1 48498 48911
ATN92768.1 MF893340_p5 hypothetical protein phrog_4103 unknown function unknown function 1 3819 4745
ATN92911.1 MF893340_p148 hypothetical protein phrog_5447 unknown function unknown function -1 83546 83770
ATN92924.1 MF893340_p161 hypothetical protein phrog_1827 ATP-dependent protease other -1 88746 89360
ATN92931.1 MF893340_p168 hypothetical protein phrog_10822 HNH endonuclease DNA, RNA and nucleotide metabolism 1 96092 96484
ATN92866.1 MF893340_p103 hypothetical protein phrog_2554 unknown function unknown function 1 60334 61029
ATN92774.1 MF893340_p11 hypothetical protein phrog_4087 unknown function unknown function 1 7585 8151
ATN92793.1 MF893340_p30 hypothetical protein phrog_4349 Rz-like spanin lysis 1 24155 24589
ATN92825.1 MF893340_p62 hypothetical protein phrog_19117 unknown function unknown function 1 40885 41487
ATN92816.1 MF893340_p53 tail spike protein phrog_6163 unknown function unknown function 1 36512 36787
ATN92844.1 MF893340_p81 hypothetical protein phrog_899 unknown function unknown function 1 50092 50328
ATN92883.1 MF893340_p120 hypothetical protein phrog_12741 unknown function unknown function -1 68034 68156
ATN92786.1 MF893340_p23 hypothetical protein phrog_120 baseplate wedge subunit tail 1 16915 17283
ATN92909.1 MF893340_p146 hypothetical protein phrog_562 RNA ligase and tail fiber protein attachment catalyst tail -1 82449 83348
ATN92792.1 MF893340_p29 hypothetical protein phrog_21126 unknown function unknown function 1 23929 24162
ATN92773.1 MF893340_p10 hypothetical protein phrog_939 head protein head and packaging 1 7220 7588
ATN92879.1 MF893340_p116 hypothetical protein singleton unknown function unknown function -1 67006 67233
ATN92912.1 MF893340_p149 hypothetical protein phrog_547 phosphoesterase other -1 83770 84339
ATN92822.1 MF893340_p59 hypothetical protein phrog_221 metallo-phosphoesterase other 1 39333 40106
ATN92876.1 MF893340_p113 hypothetical protein singleton unknown function unknown function 1 65066 65281
ATN92764.1 MF893340_p1 hypothetical protein singleton unknown function unknown function 1 146 238
ATN92871.1 MF893340_p108 hypothetical protein phrog_12215 unknown function unknown function 1 62991 63158
ATN92862.1 MF893340_p99 hypothetical protein phrog_6140 unknown function unknown function 1 58806 59063
ATN92903.1 MF893340_p140 hypothetical protein phrog_335 phosphatase other -1 77763 78260
ATN92820.1 MF893340_p57 hypothetical protein singleton unknown function unknown function 1 38798 38989
ATN92769.1 MF893340_p6 hypothetical protein phrog_49 head decoration head and packaging 1 4774 5160
ATN92923.1 MF893340_p160 hypothetical protein singleton unknown function unknown function -1 88452 88676
ATN92849.1 MF893340_p86 hypothetical protein singleton unknown function unknown function 1 52739 53179
ATN92827.1 MF893340_p64 hypothetical protein phrog_3506 thymidylate synthase DNA, RNA and nucleotide metabolism 1 42511 42849
ATN92880.1 MF893340_p117 hypothetical protein singleton unknown function unknown function -1 67230 67421
ATN92767.1 MF893340_p4 methyltransferase phrog_1530 DNA methyltransferase other 1 3370 3822
ATN92906.1 MF893340_p143 hypothetical protein singleton unknown function unknown function -1 80328 80630
ATN92809.1 MF893340_p46 hypothetical protein phrog_13446 unknown function unknown function 1 29746 29943
ATN92806.1 MF893340_p43 hypothetical protein phrog_12169 unknown function unknown function 1 28870 29082
ATN92898.1 MF893340_p135 toxic anion resistance protein phrog_3360 unknown function unknown function -1 75973 76479
ATN92829.1 MF893340_p66 ribonucleoside-diphosphate reductase phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 43925 45658
ATN92900.1 MF893340_p137 hypothetical protein phrog_12988 unknown function unknown function -1 76775 77038
ATN92799.1 MF893340_p36 hypothetical protein phrog_12621 unknown function unknown function 1 26875 27087
ATN92794.1 MF893340_p31 hypothetical protein phrog_4172 unknown function unknown function 1 24739 25044
ATN92875.1 MF893340_p112 hypothetical protein phrog_4025 unknown function unknown function 1 64523 64789
ATN92831.1 MF893340_p68 hypothetical protein phrog_32662 unknown function unknown function 1 46101 46298
ATN92847.1 MF893340_p84 hypothetical protein singleton unknown function unknown function 1 51359 51748
ATN92826.1 MF893340_p63 FAD-dependent thymidylate synthase phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 41556 42518
ATN92818.1 MF893340_p55 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 37215 38252
ATN92845.1 MF893340_p82 hypothetical protein phrog_4317 unknown function unknown function 1 50407 50952
ATN92892.1 MF893340_p129 hypothetical protein singleton unknown function unknown function -1 71905 72369
ATN92877.1 MF893340_p114 hypothetical protein singleton unknown function unknown function -1 66454 66684
ATN92854.1 MF893340_p91 hypothetical protein phrog_13040 unknown function unknown function 1 54905 55120
ATN92915.1 MF893340_p152 hypothetical protein phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 85322 86467
ATN92914.1 MF893340_p151 hypothetical protein phrog_2686 unknown function unknown function -1 84889 85335
ATN92925.1 MF893340_p162 Clp protease phrog_170 PhoH-like phosphate starvation-inducible other -1 89353 90114
ATN92790.1 MF893340_p27 tail fiber protein phrog_2282 tail fiber protein tail 1 21883 23367
ATN92881.1 MF893340_p118 hypothetical protein phrog_27253 unknown function unknown function -1 67425 67622
ATN92863.1 MF893340_p100 hypothetical protein phrog_2267 unknown function unknown function 1 59119 59418
ATN92788.1 MF893340_p25 hypothetical protein phrog_587 structural protein head and packaging 1 18752 19486
ATN92848.1 MF893340_p85 hypothetical protein phrog_2141 unknown function unknown function 1 51762 52739
ATN92846.1 MF893340_p83 hypothetical protein singleton unknown function unknown function 1 50965 51357
ATN92814.1 MF893340_p51 hypothetical protein phrog_10905 unknown function unknown function 1 34798 35205
ATN92910.1 MF893340_p147 RNA ligase phrog_14326 RNA ligase DNA, RNA and nucleotide metabolism -1 83359 83544
ATN92832.1 MF893340_p69 hypothetical protein phrog_14187 unknown function unknown function 1 46298 46492
ATN92913.1 MF893340_p150 hypothetical protein phrog_990 metal-dependent phosphohydrolase other -1 84339 84827
ATN92865.1 MF893340_p102 hypothetical protein phrog_11538 unknown function unknown function 1 59887 60261
ATN92918.1 MF893340_p155 hypothetical protein phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 86891 87385
ATN92782.1 MF893340_p19 hypothetical protein phrog_817 tail fiber protein tail 1 14105 14875
ATN92867.1 MF893340_p104 hypothetical protein phrog_5336 unknown function unknown function 1 61158 61544
ATN92852.1 MF893340_p89 hypothetical protein phrog_3118 HNH endonuclease DNA, RNA and nucleotide metabolism 1 54185 54577