Genomic map of Mycobacterium phage Arib1 (MF919492)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF919492
Definition
Mycobacterium phage Arib1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pclasvirinae; Fishburnevirus; unclassified Fishburnevirus.
DB of origin
NUCCORE
Length
46732
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
78
%GC
67.47
Number of singletons
1
Number of paralogs
2

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATN87202.1 MF919492_p58 hypothetical protein phrog_5921 unknown function unknown function 1 37535 37687
ATN87187.1 MF919492_p42 hypothetical protein phrog_5559 unknown function unknown function 1 31087 31266
ATN87173.1 MF919492_p28 hypothetical protein phrog_443 holin lysis 1 25246 25494
ATN87213.1 MF919492_p69 hypothetical protein phrog_17037 unknown function unknown function 1 43343 43486
ATN87212.1 MF919492_p68 hypothetical protein phrog_5855 unknown function unknown function 1 42771 43271
ATN87162.1 MF919492_p17 tapemeasure protein phrog_2337 tail length tape measure protein tail 1 10864 14649
ATN87189.1 MF919492_p44 hypothetical protein phrog_11260 unknown function unknown function 1 31355 31477
ATN87206.1 MF919492_p62 hypothetical protein phrog_3599 unknown function unknown function 1 40287 40829
ATN87192.1 MF919492_p47 ssDNA binding protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32549 33544
ATN87211.1 MF919492_p67 hypothetical protein phrog_10505 unknown function unknown function 1 42516 42698
ATN87184.1 MF919492_p39 hypothetical protein phrog_4656 unknown function unknown function 1 30316 30549
ATN87146.1 MF919492_p1 terminase small subunit phrog_1496 terminase small subunit head and packaging 1 55 444
ATN87222.1 MF919492_p73 hypothetical protein phrog_4550 unknown function unknown function 1 44656 44829
ATN87188.1 MF919492_p43 hypothetical protein phrog_5806 unknown function unknown function 1 31263 31394
ATN87155.1 MF919492_p10 head-to-tail connector protein phrog_2322 head-tail connector protein connector 1 7321 7644
ATN87195.1 MF919492_p50 resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34850 35353
ATN87158.1 MF919492_p13 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 8287 8724
ATN87183.1 MF919492_p38 hypothetical protein phrog_658 unknown function unknown function 1 29810 30316
ATN87186.1 MF919492_p41 hypothetical protein phrog_5803 unknown function unknown function 1 30818 31090
ATN87179.1 MF919492_p34 antirepressor phrog_130 anti-repressor Ant transcription regulation 1 27945 28808
ATN87193.1 MF919492_p48 hypothetical protein phrog_4387 unknown function unknown function 1 33541 33789
ATN87163.1 MF919492_p18 minor tail protein phrog_106 minor tail protein tail 1 14646 16391
ATN87180.1 MF919492_p35 hypothetical protein phrog_3507 unknown function unknown function 1 28805 29104
ATN87176.1 MF919492_p31 immunity repressor phrog_2328 transcriptional repressor transcription regulation -1 26952 27353
ATN87148.1 MF919492_p3 portal protein phrog_113 portal protein head and packaging 1 2106 3569
ATN87198.1 MF919492_p53 hypothetical protein singleton unknown function unknown function 1 35867 36199
ATN87218.1 MF919492_p75 hypothetical protein phrog_6617 unknown function unknown function 1 45198 45536
ATN87205.1 MF919492_p61 helix-turn-helix DNA binding domain protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 39295 40290
ATN87149.1 MF919492_p4 capsid maturation protease phrog_2976 head maturation protease head and packaging 1 3560 4894
ATN87221.1 MF919492_p78 HNH endonuclease phrog_1808 HNH endonuclease DNA, RNA and nucleotide metabolism 1 46141 46524
ATN87209.1 MF919492_p65 hypothetical protein phrog_18047 unknown function unknown function 1 41991 42257
ATN87170.1 MF919492_p25 hypothetical protein phrog_1172 unknown function unknown function 1 22882 23055
ATN87169.1 MF919492_p24 hypothetical protein phrog_240 head protein head and packaging 1 22523 22885
ATN87156.1 MF919492_p11 head-to-tail connector protein phrog_4307 unknown function unknown function 1 7644 7913
ATN87157.1 MF919492_p12 head-to-tail connector protein phrog_2325 minor tail protein tail 1 7913 8290
ATN87150.1 MF919492_p5 scaffolding protein phrog_673 head scaffolding protein head and packaging 1 4896 5261
ATN87151.1 MF919492_p6 major capsid protein phrog_1650 major head protein head and packaging 1 5299 6243
ATN87219.1 MF919492_p76 hypothetical protein phrog_1186 unknown function unknown function 1 45533 45901
ATN87196.1 MF919492_p51 hypothetical protein phrog_6109 unknown function unknown function 1 35347 35589
ATN87215.1 MF919492_p71 hypothetical protein phrog_2761 unknown function unknown function 1 43881 44192
ATN87217.1 MF919492_p74 RHH DNA binding protein phrog_4738 transcriptional repressor transcription regulation 1 44826 44999
ATN87207.1 MF919492_p63 hypothetical protein phrog_7254 unknown function unknown function 1 40826 41092
ATN87214.1 MF919492_p70 hypothetical protein phrog_18896 unknown function unknown function 1 43483 43809
ATN87171.1 MF919492_p26 lysin A phrog_6707 endolysin lysis 1 23126 24061
ATN87203.1 MF919492_p59 DNA methylase phrog_67 DNA methyltransferase other 1 37790 39160
ATN87160.1 MF919492_p16 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9932 10531
ATN87168.1 MF919492_p23 hypothetical protein phrog_6374 unknown function unknown function 1 22357 22506
ATN87191.1 MF919492_p46 exonuclease phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism 1 31623 32552
ATN87223.1 MF919492_p54 hypothetical protein phrog_2001 unknown function unknown function 1 36196 36321
ATN87154.1 MF919492_p9 head-to-tail connector protein phrog_6553 head closure Hc1 connector 1 6956 7306
ATN87178.1 MF919492_p33 hypothetical protein phrog_1622 unknown function unknown function 1 27712 27948
ATN87199.1 MF919492_p55 DNA methylase phrog_2060 DNA methyltransferase other 1 36318 36641
ATN87147.1 MF919492_p2 terminase large subunit phrog_9 terminase large subunit head and packaging 1 413 2089
ATN87216.1 MF919492_p72 hypothetical protein phrog_2202 unknown function unknown function 1 44189 44659
ATN87182.1 MF919492_p37 hypothetical protein phrog_5015 unknown function unknown function 1 29346 29747
ATN87190.1 MF919492_p45 hypothetical protein phrog_4702 unknown function unknown function 1 31477 31626
ATN87153.1 MF919492_p8 head-to-tail connector protein phrog_137 head-tail adaptor Ad1 connector 1 6594 6956
ATN87152.1 MF919492_p7 head-to-tail connector protein phrog_2322 head-tail connector protein connector 1 6243 6590
ATN87166.1 MF919492_p21 minor tail protein phrog_3493 minor tail protein tail 1 19044 21305
ATN87172.1 MF919492_p27 lysin B phrog_102 endolysin lysis 1 24058 25224
ATN87208.1 MF919492_p64 hypothetical protein phrog_908 unknown function unknown function 1 41089 41991
ATN87165.1 MF919492_p20 minor tail protein phrog_732 minor tail protein tail 1 18150 19043
ATN87167.1 MF919492_p22 minor tail protein phrog_416 minor tail protein tail 1 21305 22342
ATN87164.1 MF919492_p19 minor tail protein phrog_110 minor tail protein tail 1 16391 18127
ATN87174.1 MF919492_p29 hypothetical protein phrog_404 minor tail protein tail 1 25491 25850
ATN87159.1 MF919492_p14 major tail protein phrog_476 major tail protein tail 1 8818 9816
ATN87220.1 MF919492_p77 hypothetical protein phrog_7285 unknown function unknown function 1 45888 46136
ATN87161.1 MF919492_p15 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 9932 10850
ATN87185.1 MF919492_p40 hypothetical protein phrog_4981 unknown function unknown function 1 30546 30821
ATN87177.1 MF919492_p32 excise protein phrog_66 excisionase and transcriptional regulator integration and excision 1 27470 27715
ATN87210.1 MF919492_p66 hypothetical protein phrog_2074 unknown function unknown function 1 42262 42516
ATN87197.1 MF919492_p52 hypothetical protein phrog_3821 unknown function unknown function 1 35586 35870
ATN87175.1 MF919492_p30 integrase phrog_1 integrase integration and excision -1 25924 26880
ATN87181.1 MF919492_p36 hypothetical protein phrog_9041 unknown function unknown function 1 29101 29349
ATN87194.1 MF919492_p49 DNA translocase phrog_6152 unknown function unknown function 1 33786 34853
ATN87204.1 MF919492_p60 hypothetical protein phrog_2451 unknown function unknown function 1 39157 39291
ATN87200.1 MF919492_p56 hypothetical protein phrog_17383 DNA binding protein DNA, RNA and nucleotide metabolism 1 36638 36877
ATN87201.1 MF919492_p57 HTH DNA binding protein phrog_7170 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 36874 37542