| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF919500 |
Definition |
Mycobacterium phage Dalmatian, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Fromanvirus; unclassified Fromanvirus. |
DB of origin |
NUCCORE |
Length |
52850 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
95 |
%GC |
63.5 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATN88450.1 | MF919500_p17 | head-to-tail connector protein | phrog_748 | head-tail connector protein | connector | 1 | 13283 | 13465 |
| ATN88475.1 | MF919500_p79 | hypothetical protein | phrog_1178 | unknown function | unknown function | -1 | 46365 | 46667 |
| ATN88469.1 | MF919500_p73 | hypothetical protein | phrog_642 | unknown function | unknown function | -1 | 43406 | 43630 |
| ATN88485.1 | MF919500_p2 | hypothetical protein | phrog_940 | nuclease | DNA, RNA and nucleotide metabolism | 1 | 664 | 1497 |
| ATN88449.1 | MF919500_p16 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 12257 | 13213 |
| ATN88410.1 | MF919500_p39 | hypothetical protein | phrog_9463 | unknown function | unknown function | -1 | 28293 | 28490 |
| ATN88451.1 | MF919500_p64 | hypothetical protein | phrog_2187 | unknown function | unknown function | -1 | 40093 | 40212 |
| ATN88470.1 | MF919500_p74 | exonuclease/helicase | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43678 | 44496 |
| ATN88466.1 | MF919500_p33 | hypothetical protein | phrog_13711 | unknown function | unknown function | 1 | 25310 | 25471 |
| ATN88472.1 | MF919500_p76 | immunity repressor | phrog_357 | transcriptional repressor | transcription regulation | -1 | 44977 | 45555 |
| ATN88416.1 | MF919500_p18 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 13468 | 13845 |
| ATN88480.1 | MF919500_p92 | hypothetical protein | phrog_1617 | unknown function | unknown function | -1 | 50154 | 51035 |
| ATN88445.1 | MF919500_p12 | terminase | phrog_9 | terminase large subunit | head and packaging | 1 | 7536 | 9323 |
| ATN88436.1 | MF919500_p84 | hypothetical protein | phrog_421 | unknown function | unknown function | -1 | 47644 | 48402 |
| ATN88488.1 | MF919500_p5 | HNH endonuclease | phrog_333 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2671 | 2967 |
| ATN88442.1 | MF919500_p9 | lysin A | phrog_317 | endolysin | lysis | 1 | 4796 | 6088 |
| ATN88486.1 | MF919500_p3 | hypothetical protein | phrog_5234 | unknown function | unknown function | 1 | 1545 | 2357 |
| ATN88484.1 | MF919500_p1 | hypothetical protein | phrog_7736 | unknown function | unknown function | 1 | 332 | 448 |
| ATN88461.1 | MF919500_p28 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 20265 | 22037 |
| ATN88401.1 | MF919500_p48 | helix-turn-helix DNA binding domain protein | phrog_517 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 32086 | 32508 |
| ATN88446.1 | MF919500_p13 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 9320 | 10783 |
| ATN88468.1 | MF919500_p35 | integrase | phrog_1 | integrase | integration and excision | -1 | 25637 | 26758 |
| ATN88406.1 | MF919500_p53 | hypothetical protein | phrog_2046 | unknown function | unknown function | -1 | 36090 | 36293 |
| ATN88473.1 | MF919500_p77 | hypothetical protein | phrog_1173 | unknown function | unknown function | -1 | 45798 | 45962 |
| ATN88455.1 | MF919500_p68 | hypothetical protein | phrog_5101 | unknown function | unknown function | -1 | 41667 | 41966 |
| ATN88411.1 | MF919500_p40 | hypothetical protein | phrog_383 | unknown function | unknown function | -1 | 28487 | 28870 |
| ATN88403.1 | MF919500_p50 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 32716 | 33441 |
| ATN88440.1 | MF919500_p88 | hypothetical protein | phrog_586 | unknown function | unknown function | -1 | 49183 | 49536 |
| ATN88431.1 | MF919500_p60 | DNA primase | phrog_47 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 38649 | 39281 |
| ATN88423.1 | MF919500_p24 | tail assembly chaperone | phrog_393 | tail assembly chaperone | tail | 1 | 15866 | 16698 |
| ATN88439.1 | MF919500_p87 | hypothetical protein | phrog_2223 | unknown function | unknown function | -1 | 48870 | 49154 |
| ATN88487.1 | MF919500_p4 | hypothetical protein | phrog_3585 | immunity protein | other | 1 | 2357 | 2674 |
| ATN88467.1 | MF919500_p34 | hypothetical protein | phrog_13507 | unknown function | unknown function | -1 | 25468 | 25635 |
| ATN88444.1 | MF919500_p11 | lysin B | phrog_102 | endolysin | lysis | 1 | 6522 | 7514 |
| ATN88414.1 | MF919500_p43 | hypothetical protein | phrog_3283 | unknown function | unknown function | -1 | 29414 | 29641 |
| ATN88420.1 | MF919500_p22 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 14733 | 15152 |
| ATN88492.1 | MF919500_p61 | DNA primase | phrog_360 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 39109 | 39513 |
| ATN88418.1 | MF919500_p20 | head-to-tail connector protein | phrog_320 | head closure Hc1 | connector | 1 | 14033 | 14401 |
| ATN88425.1 | MF919500_p54 | hypothetical protein | phrog_499 | unknown function | unknown function | -1 | 36290 | 36469 |
| ATN88413.1 | MF919500_p42 | hypothetical protein | phrog_3771 | unknown function | unknown function | -1 | 29130 | 29414 |
| ATN88437.1 | MF919500_p85 | hypothetical protein | phrog_855 | unknown function | unknown function | -1 | 48402 | 48536 |
| ATN88408.1 | MF919500_p37 | hypothetical protein | phrog_549 | unknown function | unknown function | 1 | 27632 | 28015 |
| ATN88441.1 | MF919500_p89 | hypothetical protein | phrog_519 | unknown function | unknown function | -1 | 49533 | 49700 |
| ATN88426.1 | MF919500_p55 | helix-turn-helix DNA binding domain protein | phrog_354 | sigma-K factor | transcription regulation | -1 | 36469 | 37140 |
| ATN88435.1 | MF919500_p83 | hypothetical protein | phrog_439 | site-specific recombination directionality factor RDF | integration and excision | -1 | 47291 | 47647 |
| ATN88438.1 | MF919500_p86 | hypothetical protein | phrog_3718 | unknown function | unknown function | -1 | 48542 | 48805 |
| ATN88421.1 | MF919500_p23 | major tail protein | phrog_117 | major tail protein | tail | 1 | 15171 | 15755 |
| ATN88476.1 | MF919500_p80 | hypothetical protein | phrog_1875 | unknown function | unknown function | -1 | 46664 | 46936 |
| ATN88448.1 | MF919500_p15 | scaffolding protein | phrog_233 | head scaffolding protein | head and packaging | 1 | 11715 | 12227 |
| ATN88409.1 | MF919500_p38 | excise | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 28123 | 28293 |
| ATN88432.1 | MF919500_p62 | hypothetical protein | phrog_1370 | unknown function | unknown function | -1 | 39491 | 39628 |
| ATN88456.1 | MF919500_p69 | dsDNA helicase | phrog_243 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | -1 | 41997 | 42803 |
| ATN88483.1 | MF919500_p95 | hypothetical protein | phrog_1676 | unknown function | unknown function | -1 | 51344 | 51637 |
| ATN88412.1 | MF919500_p41 | hypothetical protein | phrog_2099 | unknown function | unknown function | -1 | 28867 | 29133 |
| ATN88419.1 | MF919500_p21 | head-to-tail connector protein | phrog_321 | tail completion or Neck1 protein | connector | 1 | 14401 | 14736 |
| ATN88462.1 | MF919500_p29 | minor tail protein | phrog_352 | minor tail protein | tail | 1 | 22114 | 22560 |
| ATN88417.1 | MF919500_p19 | head-to-tail connector protein | phrog_830 | head-tail connector protein | connector | 1 | 13842 | 14036 |
| ATN88399.1 | MF919500_p46 | hypothetical protein | phrog_4326 | unknown function | unknown function | -1 | 31686 | 31886 |
| ATN88489.1 | MF919500_p6 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 3006 | 3476 |
| ATN88415.1 | MF919500_p44 | hypothetical protein | phrog_896 | unknown function | unknown function | -1 | 29641 | 29859 |
| ATN88459.1 | MF919500_p72 | hypothetical protein | phrog_666 | unknown function | unknown function | -1 | 43215 | 43409 |
| ATN88460.1 | MF919500_p27 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 19252 | 20268 |
| ATN88422.1 | MF919500_p25 | tail assembly chaperone | phrog_330 | tail assembly chaperone | tail | 1 | 15866 | 16273 |
| ATN88428.1 | MF919500_p57 | metallophosphoesterase | phrog_221 | metallo-phosphoesterase | other | -1 | 37290 | 38060 |
| ATN88481.1 | MF919500_p93 | hypothetical protein | phrog_2499 | unknown function | unknown function | -1 | 51032 | 51205 |
| ATN88424.1 | MF919500_p26 | tape measure protein | phrog_305 | tail length tape measure protein | tail | 1 | 16688 | 19231 |
| ATN88400.1 | MF919500_p47 | hypothetical protein | phrog_11816 | unknown function | unknown function | -1 | 31886 | 32086 |
| ATN88482.1 | MF919500_p94 | hypothetical protein | phrog_1445 | unknown function | unknown function | -1 | 51233 | 51310 |
| ATN88463.1 | MF919500_p30 | minor tail protein | phrog_404 | minor tail protein | tail | 1 | 22557 | 22844 |
| ATN88404.1 | MF919500_p51 | hypothetical protein | phrog_364 | ribonucleoside reductase class II | DNA, RNA and nucleotide metabolism | -1 | 33521 | 34042 |
| ATN88453.1 | MF919500_p66 | HTH DNA binding domain protein | phrog_1123 | unknown function | unknown function | -1 | 41045 | 41302 |
| ATN88402.1 | MF919500_p49 | hypothetical protein | phrog_690 | unknown function | unknown function | -1 | 32505 | 32714 |
| ATN88429.1 | MF919500_p58 | hypothetical protein | phrog_474 | phosphofructokinase | other | -1 | 38057 | 38380 |
| ATN88407.1 | MF919500_p36 | hypothetical protein | phrog_733 | excisionase | integration and excision | 1 | 27148 | 27585 |
| ATN88447.1 | MF919500_p14 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 10780 | 11664 |
| ATN88452.1 | MF919500_p65 | hydrolase | phrog_789 | esterase/lipase | other | -1 | 40212 | 41048 |
| ATN88405.1 | MF919500_p52 | ribonucleotide reductase | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | -1 | 34054 | 36090 |
| ATN88434.1 | MF919500_p82 | hypothetical protein | phrog_1477 | unknown function | unknown function | -1 | 47160 | 47291 |
| ATN88457.1 | MF919500_p70 | hypothetical protein | phrog_2731 | unknown function | unknown function | -1 | 42813 | 42950 |
| ATN88491.1 | MF919500_p8 | hypothetical protein | phrog_1087 | unknown function | unknown function | 1 | 4638 | 4796 |
| ATN88471.1 | MF919500_p75 | hypothetical protein | phrog_1562 | unknown function | unknown function | -1 | 44493 | 44912 |
| ATN88398.1 | MF919500_p45 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 29891 | 31678 |
| ATN88479.1 | MF919500_p91 | hypothetical protein | phrog_6255 | unknown function | unknown function | -1 | 49897 | 50133 |
| ATN88477.1 | MF919500_p81 | hypothetical protein | phrog_3351 | unknown function | unknown function | -1 | 46933 | 47160 |
| ATN88465.1 | MF919500_p32 | hypothetical protein | phrog_2570 | unknown function | unknown function | 1 | 25113 | 25307 |
| ATN88478.1 | MF919500_p90 | hypothetical protein | phrog_1946 | unknown function | unknown function | -1 | 49697 | 49897 |
| ATN88427.1 | MF919500_p56 | hypothetical protein | phrog_2436 | unknown function | unknown function | -1 | 37137 | 37286 |
| ATN88430.1 | MF919500_p59 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | -1 | 38377 | 38649 |
| ATN88433.1 | MF919500_p63 | endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 39654 | 40127 |
| ATN88443.1 | MF919500_p10 | holin | phrog_526 | holin | lysis | 1 | 6085 | 6525 |
| ATN88458.1 | MF919500_p71 | hypothetical protein | phrog_520 | unknown function | unknown function | -1 | 42947 | 43225 |
| ATN88474.1 | MF919500_p78 | hypothetical protein | phrog_4569 | unknown function | unknown function | -1 | 46109 | 46363 |
| ATN88464.1 | MF919500_p31 | minor tail protein | phrog_737 | minor tail protein | tail | 1 | 22845 | 25049 |
| ATN88454.1 | MF919500_p67 | hypothetical protein | phrog_397 | unknown function | unknown function | -1 | 41302 | 41532 |
| ATN88490.1 | MF919500_p7 | minor tail protein | phrog_1260 | minor tail protein | tail | 1 | 3561 | 4526 |