Genomic map of Mycobacterium phage FireRed (MF919506)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF919506
Definition
Mycobacterium phage FireRed, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
NUCCORE
Length
76217
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
148
%GC
62.98
Number of singletons
0
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATN89138.1 MF919506_p42 hypothetical protein phrog_5831 unknown function unknown function -1 34928 35110
ATN89152.1 MF919506_p56 hypothetical protein phrog_2842 unknown function unknown function 1 39601 39840
ATN89125.1 MF919506_p29 hypothetical protein phrog_644 unknown function unknown function 1 28578 29006
ATN89203.1 MF919506_p107 hypothetical protein phrog_2757 unknown function unknown function 1 62228 62518
ATN89144.1 MF919506_p48 hypothetical protein phrog_1155 unknown function unknown function -1 36400 36573
ATN89213.1 MF919506_p117 hypothetical protein phrog_2965 unknown function unknown function 1 66984 67121
ATN89185.1 MF919506_p89 hypothetical protein phrog_3836 unknown function unknown function 1 52887 53252
ATN89162.1 MF919506_p66 hypothetical protein phrog_3463 unknown function unknown function 1 43708 43815
ATN89118.1 MF919506_p22 tapemeasure protein phrog_2723 tail length tape measure protein tail 1 13359 18095
ATN89126.1 MF919506_p30 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 28993 29178
ATN89155.1 MF919506_p59 hypothetical protein phrog_3071 unknown function unknown function 1 41343 41441
ATN89159.1 MF919506_p63 hypothetical protein phrog_2800 unknown function unknown function 1 42562 42840
ATN89214.1 MF919506_p118 hypothetical protein phrog_2755 unknown function unknown function 1 67108 67281
ATN89132.1 MF919506_p36 hypothetical protein phrog_726 unknown function unknown function 1 32740 33156
ATN89117.1 MF919506_p21 HNH endonuclease phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 12888 13358
ATN89112.1 MF919506_p16 head-to-tail connector protein phrog_2805 minor tail protein tail 1 10099 10479
ATN89098.1 MF919506_p2 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
ATN89220.1 MF919506_p124 hypothetical protein phrog_2296 unknown function unknown function 1 68476 68613
ATN89211.1 MF919506_p115 hypothetical protein phrog_1941 unknown function unknown function 1 65775 66017
ATN89178.1 MF919506_p82 hypothetical protein phrog_1673 unknown function unknown function 1 49786 50022
ATN89140.1 MF919506_p44 hypothetical protein phrog_722 unknown function unknown function -1 35316 35594
ATN89163.1 MF919506_p67 hypothetical protein phrog_2147 unknown function unknown function 1 43823 44122
ATN89121.1 MF919506_p25 minor tail protein phrog_732 minor tail protein tail 1 21462 22295
ATN89173.1 MF919506_p77 hypothetical protein phrog_572 unknown function unknown function 1 48298 48663
ATN89147.1 MF919506_p51 hypothetical protein phrog_2702 unknown function unknown function -1 36966 37181
ATN89167.1 MF919506_p71 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 45060 46028
ATN89233.1 MF919506_p137 hypothetical protein phrog_2287 unknown function unknown function -1 72304 72540
ATN89202.1 MF919506_p106 hypothetical protein phrog_2785 unknown function unknown function 1 61871 62227
ATN89230.1 MF919506_p134 hypothetical protein phrog_1587 unknown function unknown function -1 71305 71634
ATN89115.1 MF919506_p20 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 11979 12440
ATN89212.1 MF919506_p116 DNA recombinase phrog_97 UvsX-like recombinase other 1 66025 66987
ATN89226.1 MF919506_p130 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 69704 70093
ATN89216.1 MF919506_p120 hypothetical protein phrog_3062 unknown function unknown function 1 67467 67721
ATN89199.1 MF919506_p103 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 60340 60780
ATN89156.1 MF919506_p60 hypothetical protein phrog_2852 unknown function unknown function 1 41438 41575
ATN89184.1 MF919506_p88 hypothetical protein phrog_2747 unknown function unknown function 1 52673 52894
ATN89236.1 MF919506_p140 hypothetical protein phrog_4496 unknown function unknown function -1 73502 73855
ATN89123.1 MF919506_p27 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 24705 27545
ATN89119.1 MF919506_p23 minor tail protein phrog_106 minor tail protein tail 1 18125 19786
ATN89137.1 MF919506_p41 hypothetical protein phrog_3472 unknown function unknown function -1 34677 34931
ATN89225.1 MF919506_p129 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 69444 69707
ATN89181.1 MF919506_p85 dsDNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 50994 52256
ATN89103.1 MF919506_p7 hypothetical protein phrog_18713 unknown function unknown function -1 1551 1733
ATN89239.1 MF919506_p143 hypothetical protein phrog_2795 unknown function unknown function -1 74272 74469
ATN89227.1 MF919506_p131 hypothetical protein phrog_2942 unknown function unknown function -1 70211 70471
ATN89201.1 MF919506_p105 hypothetical protein phrog_1454 unknown function unknown function 1 61677 61874
ATN89164.1 MF919506_p68 hypothetical protein phrog_2221 unknown function unknown function 1 44055 44216
ATN89205.1 MF919506_p109 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62887 63177
ATN89122.1 MF919506_p26 minor tail protein phrog_346 minor tail protein tail 1 22312 24708
ATN89099.1 MF919506_p3 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
ATN89171.1 MF919506_p75 hypothetical protein phrog_2771 unknown function unknown function 1 47457 47927
ATN89192.1 MF919506_p96 helix-turn-helix DNA binding domain protein phrog_1590 unknown function unknown function 1 56549 57370
ATN89186.1 MF919506_p90 holliday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 53249 53611
ATN89187.1 MF919506_p91 hypothetical protein phrog_2894 unknown function unknown function 1 53608 53802
ATN89102.1 MF919506_p6 hypothetical protein phrog_4101 unknown function unknown function -1 1309 1551
ATN89204.1 MF919506_p108 helix-turn-helix DNA binding domain protein phrog_1969 unknown function unknown function 1 62523 62834
ATN89130.1 MF919506_p34 hypothetical protein phrog_2424 unknown function unknown function 1 31551 31889
ATN89111.1 MF919506_p15 head-to-tail connector protein phrog_1531 head closure connector 1 9767 10102
ATN89231.1 MF919506_p135 hypothetical protein phrog_4006 unknown function unknown function -1 71639 72199
ATN89148.1 MF919506_p52 hypothetical protein phrog_2815 unknown function unknown function -1 37200 37346
ATN89172.1 MF919506_p76 hypothetical protein phrog_1389 unknown function unknown function 1 47927 48295
ATN89170.1 MF919506_p74 hypothetical protein phrog_2750 unknown function unknown function 1 47146 47457
ATN89114.1 MF919506_p18 major tail protein phrog_476 major tail protein tail 1 10888 11859
ATN89215.1 MF919506_p119 hypothetical protein phrog_2279 unknown function unknown function 1 67274 67486
ATN89158.1 MF919506_p62 hypothetical protein phrog_2463 unknown function unknown function 1 42419 42565
ATN89180.1 MF919506_p84 hypothetical protein phrog_572 unknown function unknown function 1 50666 51001
ATN89182.1 MF919506_p86 hypothetical protein phrog_1091 unknown function unknown function 1 52253 52441
ATN89101.1 MF919506_p5 terminase small subunit phrog_83 terminase small subunit head and packaging 1 776 1237
ATN89229.1 MF919506_p133 hypothetical protein phrog_1915 unknown function unknown function -1 70833 71291
ATN89120.1 MF919506_p24 minor tail protein phrog_110 minor tail protein tail 1 19858 21453
ATN89242.1 MF919506_p146 hypothetical protein phrog_2904 unknown function unknown function 1 75003 75350
ATN89219.1 MF919506_p123 hypothetical protein phrog_2823 unknown function unknown function 1 68279 68479
ATN89244.1 MF919506_p148 HNH endonuclease phrog_589 HNH endonuclease DNA, RNA and nucleotide metabolism 1 75636 75983
ATN89221.1 MF919506_p125 hypothetical protein phrog_2925 unknown function unknown function 1 68610 68789
ATN89157.1 MF919506_p61 pentapeptide repeat protein phrog_923 unknown function unknown function 1 41572 42417
ATN89243.1 MF919506_p147 hypothetical protein phrog_2762 unknown function unknown function 1 75425 75646
ATN89166.1 MF919506_p70 hypothetical protein phrog_762 unknown function unknown function 1 44734 45063
ATN89194.1 MF919506_p98 hypothetical protein phrog_2853 unknown function unknown function 1 57644 57802
ATN89237.1 MF919506_p141 hypothetical protein phrog_1438 unknown function unknown function -1 73860 74033
ATN89238.1 MF919506_p142 hypothetical protein phrog_2772 unknown function unknown function -1 74030 74266
ATN89124.1 MF919506_p28 minor tail protein phrog_553 minor tail protein tail 1 27546 28508
ATN89141.1 MF919506_p45 hypothetical protein phrog_1573 DNA methyltransferase other -1 35591 36025
ATN89175.1 MF919506_p79 hypothetical protein phrog_2793 unknown function unknown function 1 48839 49072
ATN89143.1 MF919506_p47 hypothetical protein phrog_6127 unknown function unknown function -1 36290 36403
ATN89177.1 MF919506_p81 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 49479 49796
ATN89150.1 MF919506_p54 membrane domain protein phrog_2847 unknown function unknown function -1 38028 38330
ATN89108.1 MF919506_p12 major capsid protein phrog_10 major head protein head and packaging 1 7435 8928
ATN89218.1 MF919506_p122 hypothetical protein phrog_2764 unknown function unknown function 1 68128 68295
ATN89189.1 MF919506_p93 hypothetical protein phrog_7164 unknown function unknown function 1 54898 55095
ATN89136.1 MF919506_p40 hypothetical protein phrog_647 unknown function unknown function -1 34216 34680
ATN89153.1 MF919506_p57 hypothetical protein phrog_950 unknown function unknown function -1 39818 40591
ATN89154.1 MF919506_p58 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 40686 41033
ATN89191.1 MF919506_p95 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 55187 56512
ATN89135.1 MF919506_p39 hypothetical protein phrog_3481 unknown function unknown function -1 34022 34213
ATN89183.1 MF919506_p87 WhiB family transcription factor phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 52438 52698
ATN89209.1 MF919506_p113 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 64503 64982
ATN89145.1 MF919506_p49 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 36573 36740
ATN89196.1 MF919506_p100 hypothetical protein phrog_2788 unknown function unknown function 1 58244 58579
ATN89169.1 MF919506_p73 ERF family ssDNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 46431 47153
ATN89208.1 MF919506_p112 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 64126 64500
ATN89200.1 MF919506_p104 protease phrog_94 head maturation protease head and packaging 1 60869 61675
ATN89232.1 MF919506_p136 hypothetical protein phrog_3730 unknown function unknown function -1 72189 72314
ATN89142.1 MF919506_p46 hypothetical protein phrog_722 unknown function unknown function -1 36022 36297
ATN89134.1 MF919506_p38 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 33588 33974
ATN89217.1 MF919506_p121 hypothetical protein phrog_2174 unknown function unknown function 1 67718 68131
ATN89188.1 MF919506_p92 polynucleotide kinase phrog_505 polynucleotide kinase other 1 53957 54898
ATN89197.1 MF919506_p101 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 58612 59118
ATN89128.1 MF919506_p32 lysin A phrog_317 endolysin lysis 1 29669 31171
ATN89160.1 MF919506_p64 hypothetical protein phrog_4633 unknown function unknown function 1 43149 43337
ATN89222.1 MF919506_p126 hypothetical protein phrog_2897 unknown function unknown function 1 68789 68920
ATN89131.1 MF919506_p35 lysin B phrog_102 endolysin lysis 1 31886 32743
ATN89097.1 MF919506_p1 hypothetical protein phrog_3456 unknown function unknown function 1 10 270
ATN89179.1 MF919506_p83 hypothetical protein phrog_1882 unknown function unknown function 1 50019 50669
ATN89207.1 MF919506_p111 hypothetical protein phrog_1042 unknown function unknown function 1 63852 64115
ATN89195.1 MF919506_p99 hypothetical protein phrog_889 unknown function unknown function 1 57799 58242
ATN89176.1 MF919506_p80 hypothetical protein phrog_289 GTP-binding domain other 1 49069 49482
ATN89193.1 MF919506_p97 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 57367 57627
ATN89210.1 MF919506_p114 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 64993 65778
ATN89223.1 MF919506_p127 hypothetical protein phrog_3016 unknown function unknown function 1 68931 69065
ATN89235.1 MF919506_p139 hypothetical protein phrog_3174 unknown function unknown function -1 73111 73497
ATN89106.1 MF919506_p10 portal protein phrog_12 portal protein head and packaging 1 4787 6343
ATN89161.1 MF919506_p65 hypothetical protein phrog_2744 unknown function unknown function 1 43384 43689
ATN89168.1 MF919506_p72 hypothetical protein phrog_572 unknown function unknown function 1 46025 46438
ATN89174.1 MF919506_p78 hypothetical protein phrog_1622 unknown function unknown function 1 48663 48836
ATN89105.1 MF919506_p9 hypothetical protein phrog_2845 unknown function unknown function 1 4579 4800
ATN89116.1 MF919506_p19 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 11979 12853
ATN89107.1 MF919506_p11 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 6346 7347
ATN89104.1 MF919506_p8 terminase large subunit phrog_9 terminase large subunit head and packaging 1 1904 4567
ATN89149.1 MF919506_p53 hypothetical protein phrog_2759 unknown function unknown function -1 37346 37741
ATN89241.1 MF919506_p145 hypothetical protein phrog_5130 unknown function unknown function -1 74747 74938
ATN89113.1 MF919506_p17 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 10457 10861
ATN89151.1 MF919506_p55 integrase phrog_1 integrase integration and excision 1 38581 39462
ATN89206.1 MF919506_p110 hypothetical protein phrog_2846 unknown function unknown function 1 63631 63855
ATN89139.1 MF919506_p43 hypothetical protein phrog_3447 unknown function unknown function -1 35107 35319
ATN89228.1 MF919506_p132 hypothetical protein phrog_3034 unknown function unknown function -1 70468 70836
ATN89198.1 MF919506_p102 DNA methylase phrog_67 DNA methyltransferase other 1 59115 60347
ATN89109.1 MF919506_p13 head-to-tail connector protein phrog_2796 head-tail connector protein connector 1 8995 9186
ATN89133.1 MF919506_p37 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 33163 33408
ATN89165.1 MF919506_p69 hypothetical protein phrog_301 secreted protein other 1 44405 44737
ATN89240.1 MF919506_p144 hypothetical protein phrog_5970 unknown function unknown function -1 74487 74750
ATN89110.1 MF919506_p14 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 9186 9752
ATN89146.1 MF919506_p50 hypothetical protein phrog_2893 unknown function unknown function -1 36737 36907
ATN89190.1 MF919506_p94 hypothetical protein phrog_2844 unknown function unknown function 1 55092 55190
ATN89127.1 MF919506_p31 hypothetical protein phrog_411 unknown function unknown function 1 29311 29595
ATN89100.1 MF919506_p4 hypothetical protein phrog_2775 unknown function unknown function 1 601 783
ATN89234.1 MF919506_p138 hypothetical protein phrog_2883 unknown function unknown function -1 72556 73107
ATN89224.1 MF919506_p128 hypothetical protein phrog_6448 unknown function unknown function 1 69067 69180
ATN89129.1 MF919506_p33 holin phrog_526 holin lysis 1 31175 31558