| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF919514 |
Definition |
Gordonia phage Lennon, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Vividuovirus; Gordonia virus Lennon. |
DB of origin |
NUCCORE |
Length |
60237 |
Host Name |
Gordonia terrae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
85 |
%GC |
67.36 |
Number of singletons |
6 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATN90245.1 | MF919514_p51 | ssDNA binding protein | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 44231 | 45241 |
| ATN90266.1 | MF919514_p73 | hypothetical protein | phrog_13001 | unknown function | unknown function | 1 | 55866 | 56129 |
| ATN90229.1 | MF919514_p35 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 31965 | 33728 |
| ATN90259.1 | MF919514_p66 | hypothetical protein | phrog_8105 | unknown function | unknown function | 1 | 52006 | 52374 |
| ATN90246.1 | MF919514_p52 | hypothetical protein | phrog_14395 | unknown function | unknown function | 1 | 45259 | 45696 |
| ATN90277.1 | MF919514_p84 | HTH DNA binding protein | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59043 | 59306 |
| ATN90195.1 | MF919514_p1 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 1 | 510 |
| ATN90217.1 | MF919514_p23 | hypothetical protein | phrog_779 | unknown function | unknown function | 1 | 18329 | 19159 |
| ATN90279.1 | MF919514_p58 | hypothetical protein | phrog_28326 | unknown function | unknown function | 1 | 47954 | 48301 |
| ATN90228.1 | MF919514_p34 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 31006 | 31962 |
| ATN90230.1 | MF919514_p36 | HNH endonuclease | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 33740 | 34213 |
| ATN90206.1 | MF919514_p12 | hypothetical protein | phrog_781 | unknown function | unknown function | 1 | 7052 | 7351 |
| ATN90265.1 | MF919514_p72 | hypothetical protein | phrog_17794 | unknown function | unknown function | 1 | 55403 | 55873 |
| ATN90273.1 | MF919514_p80 | hypothetical protein | phrog_15181 | unknown function | unknown function | 1 | 57735 | 58022 |
| ATN90278.1 | MF919514_p85 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 59303 | 60049 |
| ATN90201.1 | MF919514_p7 | hypothetical protein | phrog_21555 | unknown function | unknown function | 1 | 5045 | 5497 |
| ATN90200.1 | MF919514_p6 | membrane protein | phrog_33939 | unknown function | unknown function | 1 | 4140 | 5048 |
| ATN90252.1 | MF919514_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48333 | 49508 |
| ATN90250.1 | MF919514_p56 | HTH DNA binding protein | phrog_27344 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 46386 | 47429 |
| ATN90249.1 | MF919514_p55 | hypothetical protein | phrog_27757 | unknown function | unknown function | 1 | 46084 | 46389 |
| ATN90257.1 | MF919514_p64 | hypothetical protein | phrog_22035 | unknown function | unknown function | 1 | 51406 | 51690 |
| ATN90269.1 | MF919514_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56636 | 56923 |
| ATN90244.1 | MF919514_p50 | HNH endonuclease | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 43707 | 44228 |
| ATN90222.1 | MF919514_p28 | hypothetical protein | phrog_810 | unknown function | unknown function | 1 | 23454 | 24002 |
| ATN90242.1 | MF919514_p48 | exonuclease | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism | 1 | 42278 | 43441 |
| ATN90203.1 | MF919514_p9 | hypothetical protein | phrog_22356 | unknown function | unknown function | 1 | 5763 | 6158 |
| ATN90208.1 | MF919514_p14 | hypothetical protein | phrog_14528 | unknown function | unknown function | 1 | 8984 | 9343 |
| ATN90210.1 | MF919514_p16 | capsid morphogenesis protein | phrog_18477 | head morphogenesis | head and packaging | 1 | 9525 | 12635 |
| ATN90272.1 | MF919514_p79 | hypothetical protein | phrog_26813 | unknown function | unknown function | 1 | 57370 | 57720 |
| ATN90196.1 | MF919514_p2 | terminase | phrog_38 | terminase large subunit | head and packaging | 1 | 515 | 2107 |
| ATN90260.1 | MF919514_p67 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52374 | 52583 |
| ATN90205.1 | MF919514_p11 | hypothetical protein | phrog_23472 | unknown function | unknown function | 1 | 6801 | 6968 |
| ATN90218.1 | MF919514_p24 | hypothetical protein | phrog_14463 | unknown function | unknown function | 1 | 19177 | 19689 |
| ATN90241.1 | MF919514_p47 | hypothetical protein | phrog_5984 | unknown function | unknown function | 1 | 42027 | 42281 |
| ATN90234.1 | MF919514_p40 | hypothetical protein | phrog_23538 | unknown function | unknown function | 1 | 37090 | 37275 |
| ATN90219.1 | MF919514_p25 | major tail protein | phrog_792 | major tail protein | tail | 1 | 19794 | 20489 |
| ATN90248.1 | MF919514_p54 | HTH DNA binding protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 45871 | 46074 |
| ATN90231.1 | MF919514_p37 | hypothetical protein | phrog_352 | minor tail protein | tail | 1 | 34333 | 34890 |
| ATN90237.1 | MF919514_p43 | membrane protein | phrog_1298 | minor tail protein | tail | 1 | 39651 | 40331 |
| ATN90209.1 | MF919514_p15 | hypothetical protein | phrog_36055 | unknown function | unknown function | 1 | 9340 | 9540 |
| ATN90236.1 | MF919514_p42 | membrane protein | phrog_443 | holin | lysis | 1 | 39187 | 39654 |
| ATN90271.1 | MF919514_p78 | hypothetical protein | phrog_26914 | unknown function | unknown function | 1 | 57093 | 57314 |
| ATN90253.1 | MF919514_p60 | hypothetical protein | phrog_19496 | unknown function | unknown function | 1 | 49505 | 49684 |
| ATN90256.1 | MF919514_p63 | hypothetical protein | phrog_26886 | unknown function | unknown function | 1 | 51014 | 51409 |
| ATN90254.1 | MF919514_p61 | hypothetical protein | phrog_16769 | unknown function | unknown function | 1 | 49681 | 50073 |
| ATN90211.1 | MF919514_p17 | hypothetical protein | phrog_17748 | unknown function | unknown function | 1 | 12632 | 12850 |
| ATN90235.1 | MF919514_p41 | lysin A | phrog_2998 | endolysin | lysis | 1 | 37361 | 39172 |
| ATN90202.1 | MF919514_p8 | hypothetical protein | phrog_21387 | unknown function | unknown function | 1 | 5525 | 5698 |
| ATN90199.1 | MF919514_p5 | hypothetical protein | phrog_1008 | DNA methyltransferase | other | 1 | 3295 | 4143 |
| ATN90227.1 | MF919514_p33 | tapemeasure protein | phrog_6090 | tail length tape measure protein | tail | 1 | 26184 | 30995 |
| ATN90263.1 | MF919514_p70 | hypothetical protein | phrog_26185 | unknown function | unknown function | 1 | 53690 | 54817 |
| ATN90261.1 | MF919514_p68 | resolvase | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 52663 | 53334 |
| ATN90262.1 | MF919514_p69 | hypothetical protein | phrog_33917 | unknown function | unknown function | 1 | 53331 | 53693 |
| ATN90216.1 | MF919514_p22 | major capsid protein | phrog_777 | major head protein | head and packaging | 1 | 16336 | 18231 |
| ATN90197.1 | MF919514_p3 | hypothetical protein | singleton | unknown function | unknown function | 1 | 2186 | 2437 |
| ATN90240.1 | MF919514_p46 | hypothetical protein | phrog_17370 | unknown function | unknown function | 1 | 41584 | 42030 |
| ATN90225.1 | MF919514_p31 | hypothetical protein | phrog_14331 | unknown function | unknown function | 1 | 24861 | 25472 |
| ATN90251.1 | MF919514_p57 | hypothetical protein | phrog_6055 | unknown function | unknown function | 1 | 47426 | 47929 |
| ATN90247.1 | MF919514_p53 | hypothetical protein | phrog_24531 | unknown function | unknown function | 1 | 45674 | 45874 |
| ATN90215.1 | MF919514_p21 | hypothetical protein | phrog_14225 | unknown function | unknown function | 1 | 16113 | 16226 |
| ATN90238.1 | MF919514_p44 | membrane protein | phrog_726 | unknown function | unknown function | 1 | 40321 | 40770 |
| ATN90264.1 | MF919514_p71 | hypothetical protein | phrog_21901 | unknown function | unknown function | 1 | 54814 | 55116 |
| ATN90243.1 | MF919514_p49 | hypothetical protein | phrog_27530 | unknown function | unknown function | 1 | 43444 | 43710 |
| ATN90221.1 | MF919514_p27 | head-to-tail connector protein | phrog_783 | head-tail adaptor | connector | 1 | 22681 | 23454 |
| ATN90268.1 | MF919514_p75 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56283 | 56633 |
| ATN90255.1 | MF919514_p62 | hypothetical protein | phrog_21374 | unknown function | unknown function | 1 | 50070 | 51029 |
| ATN90220.1 | MF919514_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20616 | 22505 |
| ATN90239.1 | MF919514_p45 | lysin B | phrog_102 | endolysin | lysis | 1 | 40763 | 41497 |
| ATN90270.1 | MF919514_p77 | hypothetical protein | phrog_4852 | unknown function | unknown function | 1 | 56905 | 57096 |
| ATN90213.1 | MF919514_p19 | hypothetical protein | phrog_23855 | unknown function | unknown function | 1 | 15480 | 15653 |
| ATN90274.1 | MF919514_p81 | hypothetical protein | phrog_3848 | unknown function | unknown function | 1 | 58019 | 58336 |
| ATN90258.1 | MF919514_p65 | hypothetical protein | phrog_23432 | unknown function | unknown function | 1 | 51742 | 51930 |
| ATN90226.1 | MF919514_p32 | hypothetical protein | phrog_13927 | unknown function | unknown function | 1 | 25481 | 26089 |
| ATN90275.1 | MF919514_p82 | hypothetical protein | phrog_17681 | unknown function | unknown function | 1 | 58333 | 58719 |
| ATN90214.1 | MF919514_p20 | HNH endonuclease | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15643 | 16110 |
| ATN90233.1 | MF919514_p39 | hypothetical protein | phrog_4137 | unknown function | unknown function | 1 | 36815 | 37093 |
| ATN90223.1 | MF919514_p29 | hypothetical protein | phrog_901 | unknown function | unknown function | 1 | 23999 | 24406 |
| ATN90212.1 | MF919514_p18 | capsid maturation protease | phrog_18402 | head maturation protease | head and packaging | 1 | 12920 | 15478 |
| ATN90207.1 | MF919514_p13 | portal protein | phrog_776 | portal protein | head and packaging | 1 | 7365 | 8987 |
| ATN90232.1 | MF919514_p38 | minor tail protein | phrog_2689 | minor tail protein | tail | 1 | 34887 | 36809 |
| ATN90224.1 | MF919514_p30 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 24387 | 24821 |
| ATN90276.1 | MF919514_p83 | hypothetical protein | phrog_17380 | unknown function | unknown function | 1 | 58716 | 58982 |
| ATN90204.1 | MF919514_p10 | lipoprotein | phrog_4980 | superinfection exclusion | moron, auxiliary metabolic gene and host takeover | 1 | 6257 | 6799 |
| ATN90267.1 | MF919514_p74 | hypothetical protein | phrog_24143 | unknown function | unknown function | 1 | 56126 | 56269 |
| ATN90198.1 | MF919514_p4 | HNH endonuclease | phrog_5046 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2807 | 3274 |