| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF919524 |
Definition |
Mycobacterium phage MISSy, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
NUCCORE |
Length |
75808 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
145 |
%GC |
63.07 |
Number of singletons |
0 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATS92656.1 | MF919524_p52 | integrase | phrog_1 | integrase | integration and excision | 1 | 37590 | 38471 |
| ATS92722.1 | MF919524_p118 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 67510 | 67764 |
| ATS92623.1 | MF919524_p19 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 11979 | 12850 |
| ATS92703.1 | MF919524_p99 | helix-turn-helix DNA binding domain protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 58044 | 58586 |
| ATS92748.1 | MF919524_p144 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 75016 | 75237 |
| ATS92685.1 | MF919524_p81 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 49663 | 50013 |
| ATS92632.1 | MF919524_p28 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28062 | 28490 |
| ATS92681.1 | MF919524_p77 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 48096 | 48494 |
| ATS92633.1 | MF919524_p29 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28477 | 28662 |
| ATS92743.1 | MF919524_p139 | hypothetical protein | phrog_4496 | unknown function | unknown function | -1 | 73544 | 73897 |
| ATS92701.1 | MF919524_p97 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 57267 | 57710 |
| ATS92683.1 | MF919524_p79 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 48798 | 49034 |
| ATS92609.1 | MF919524_p5 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 776 | 1237 |
| ATS92745.1 | MF919524_p141 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 74072 | 74308 |
| ATS92640.1 | MF919524_p36 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 32648 | 32893 |
| ATS92740.1 | MF919524_p136 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 72340 | 72576 |
| ATS92744.1 | MF919524_p140 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 73902 | 74075 |
| ATS92664.1 | MF919524_p60 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 41571 | 41849 |
| ATS92612.1 | MF919524_p8 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1904 | 4567 |
| ATS92674.1 | MF919524_p70 | ERF family ssDNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45440 | 46162 |
| ATS92691.1 | MF919524_p87 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 52261 | 52623 |
| ATS92677.1 | MF919524_p73 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 46936 | 47304 |
| ATS92639.1 | MF919524_p35 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32225 | 32641 |
| ATS92638.1 | MF919524_p34 | lysin B | phrog_102 | endolysin | lysis | 1 | 31371 | 32228 |
| ATS92720.1 | MF919524_p116 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 67151 | 67324 |
| ATS92704.1 | MF919524_p100 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 58583 | 60391 |
| ATS92717.1 | MF919524_p113 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 65818 | 66060 |
| ATS92655.1 | MF919524_p51 | membrane domain protein | phrog_2847 | unknown function | unknown function | -1 | 37037 | 37339 |
| ATS92676.1 | MF919524_p72 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 46466 | 46936 |
| ATS92610.1 | MF919524_p6 | hypothetical protein | phrog_4101 | unknown function | unknown function | -1 | 1309 | 1551 |
| ATS92690.1 | MF919524_p86 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 51899 | 52264 |
| ATS92642.1 | MF919524_p38 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 33507 | 33704 |
| ATS92696.1 | MF919524_p92 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 54199 | 55524 |
| ATS92613.1 | MF919524_p9 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 4579 | 4800 |
| ATS92605.1 | MF919524_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 10 | 270 |
| ATS92711.1 | MF919524_p107 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 62930 | 63220 |
| ATS92739.1 | MF919524_p135 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 72225 | 72350 |
| ATS92680.1 | MF919524_p76 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 47851 | 48084 |
| ATS92746.1 | MF919524_p142 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 74314 | 74511 |
| ATS92728.1 | MF919524_p124 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 68832 | 68963 |
| ATS92738.1 | MF919524_p134 | hypothetical protein | phrog_4547 | unknown function | unknown function | -1 | 71902 | 72219 |
| ATS92652.1 | MF919524_p48 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 35975 | 36190 |
| ATS92716.1 | MF919524_p112 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 65036 | 65821 |
| ATS92687.1 | MF919524_p83 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 51265 | 51453 |
| ATS92712.1 | MF919524_p108 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 63674 | 63898 |
| ATS92643.1 | MF919524_p39 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 33701 | 34165 |
| ATS92719.1 | MF919524_p115 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 67027 | 67164 |
| ATS92626.1 | MF919524_p22 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 17609 | 19270 |
| ATS92723.1 | MF919524_p119 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 67713 | 68174 |
| ATS92630.1 | MF919524_p26 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24189 | 27029 |
| ATS92660.1 | MF919524_p56 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 40352 | 40450 |
| ATS92747.1 | MF919524_p143 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 74615 | 74974 |
| ATS92614.1 | MF919524_p10 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4787 | 6343 |
| ATS92662.1 | MF919524_p58 | pentapeptide repeat protein | phrog_923 | unknown function | unknown function | 1 | 40581 | 41426 |
| ATS92621.1 | MF919524_p17 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 10457 | 10861 |
| ATS92666.1 | MF919524_p62 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 42393 | 42698 |
| ATS92708.1 | MF919524_p104 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 61915 | 62274 |
| ATS92670.1 | MF919524_p66 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 43414 | 43746 |
| ATS92682.1 | MF919524_p78 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48491 | 48808 |
| ATS92661.1 | MF919524_p57 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 40447 | 40584 |
| ATS92650.1 | MF919524_p46 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 35582 | 35749 |
| ATS92644.1 | MF919524_p40 | hypothetical protein | phrog_3472 | unknown function | unknown function | -1 | 34162 | 34416 |
| ATS92624.1 | MF919524_p20 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 11979 | 12440 |
| ATS92725.1 | MF919524_p121 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 68322 | 68522 |
| ATS92608.1 | MF919524_p4 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 601 | 783 |
| ATS92668.1 | MF919524_p64 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 42832 | 43131 |
| ATS92715.1 | MF919524_p111 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 64546 | 65025 |
| ATS92713.1 | MF919524_p109 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 63925 | 64158 |
| ATS92672.1 | MF919524_p68 | exonuclease | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 44069 | 45037 |
| ATS92646.1 | MF919524_p42 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | -1 | 34591 | 35034 |
| ATS92641.1 | MF919524_p37 | DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 33073 | 33459 |
| ATS92627.1 | MF919524_p23 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19258 | 20937 |
| ATS92647.1 | MF919524_p43 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 35031 | 35306 |
| ATS92742.1 | MF919524_p138 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 73144 | 73539 |
| ATS92659.1 | MF919524_p55 | immunity repressor | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 39695 | 40042 |
| ATS92616.1 | MF919524_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7435 | 8928 |
| ATS92678.1 | MF919524_p74 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 47301 | 47675 |
| ATS92684.1 | MF919524_p80 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 49031 | 49681 |
| ATS92654.1 | MF919524_p50 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 36355 | 36750 |
| ATS92649.1 | MF919524_p45 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 35409 | 35582 |
| ATS92671.1 | MF919524_p67 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 43743 | 44072 |
| ATS92724.1 | MF919524_p120 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 68171 | 68338 |
| ATS92714.1 | MF919524_p110 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 64169 | 64543 |
| ATS92615.1 | MF919524_p11 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 6346 | 7347 |
| ATS92657.1 | MF919524_p53 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 38610 | 38849 |
| ATS92679.1 | MF919524_p75 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 47675 | 47854 |
| ATS92606.1 | MF919524_p2 | hypothetical protein | phrog_4110 | unknown function | unknown function | 1 | 267 | 449 |
| ATS92749.1 | MF919524_p145 | HNH endonuclease | phrog_589 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 75227 | 75574 |
| ATS92619.1 | MF919524_p15 | head-to-tail connector protein | phrog_1531 | head closure | connector | 1 | 9767 | 10102 |
| ATS92634.1 | MF919524_p30 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 28795 | 29079 |
| ATS92721.1 | MF919524_p117 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 67317 | 67529 |
| ATS92648.1 | MF919524_p44 | hypothetical protein | phrog_6127 | unknown function | unknown function | -1 | 35299 | 35412 |
| ATS92620.1 | MF919524_p16 | head-to-tail connector protein | phrog_2805 | minor tail protein | tail | 1 | 10099 | 10479 |
| ATS92692.1 | MF919524_p88 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 52620 | 52814 |
| ATS92705.1 | MF919524_p101 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 60384 | 60824 |
| ATS92618.1 | MF919524_p14 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 9186 | 9752 |
| ATS92617.1 | MF919524_p13 | head-to-tail connector protein | phrog_2796 | head-tail connector protein | connector | 1 | 8995 | 9186 |
| ATS92629.1 | MF919524_p25 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 21796 | 24192 |
| ATS92625.1 | MF919524_p21 | tapemeasure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 12843 | 17579 |
| ATS92694.1 | MF919524_p90 | hypothetical protein | phrog_7164 | unknown function | unknown function | 1 | 53910 | 54107 |
| ATS92693.1 | MF919524_p89 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 52969 | 53910 |
| ATS92734.1 | MF919524_p130 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 70476 | 70736 |
| ATS92710.1 | MF919524_p106 | helix-turn-helix DNA binding protein | phrog_1969 | unknown function | unknown function | 1 | 62566 | 62877 |
| ATS92689.1 | MF919524_p85 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 51685 | 51906 |
| ATS92698.1 | MF919524_p94 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 56379 | 56639 |
| ATS92686.1 | MF919524_p82 | dsDNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 50006 | 51268 |
| ATS92622.1 | MF919524_p18 | major tail protein | phrog_476 | major tail protein | tail | 1 | 10888 | 11859 |
| ATS92733.1 | MF919524_p129 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 69962 | 70357 |
| ATS92737.1 | MF919524_p133 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 71571 | 71918 |
| ATS92741.1 | MF919524_p137 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 72592 | 73104 |
| ATS92709.1 | MF919524_p105 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 62271 | 62561 |
| ATS92645.1 | MF919524_p41 | hypothetical protein | phrog_2591 | unknown function | unknown function | -1 | 34413 | 34598 |
| ATS92631.1 | MF919524_p27 | minor tail protein | phrog_553 | minor tail protein | tail | 1 | 27030 | 27992 |
| ATS92663.1 | MF919524_p59 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 41428 | 41574 |
| ATS92636.1 | MF919524_p32 | holin | phrog_526 | holin | lysis | 1 | 30660 | 31043 |
| ATS92736.1 | MF919524_p132 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 71098 | 71556 |
| ATS92702.1 | MF919524_p98 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 57712 | 58047 |
| ATS92732.1 | MF919524_p128 | hypothetical protein | phrog_33449 | unknown function | unknown function | -1 | 69753 | 69965 |
| ATS92735.1 | MF919524_p131 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 70733 | 71101 |
| ATS92665.1 | MF919524_p61 | hypothetical protein | phrog_4633 | unknown function | unknown function | 1 | 42158 | 42346 |
| ATS92658.1 | MF919524_p54 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 38827 | 39600 |
| ATS92718.1 | MF919524_p114 | DNA recombinase | phrog_97 | UvsX-like recombinase | other | 1 | 66068 | 67030 |
| ATS92726.1 | MF919524_p122 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 68519 | 68656 |
| ATS92611.1 | MF919524_p7 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1551 | 1859 |
| ATS92699.1 | MF919524_p95 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 56656 | 56814 |
| ATS92730.1 | MF919524_p126 | hypothetical protein | phrog_6448 | unknown function | unknown function | 1 | 69110 | 69223 |
| ATS92697.1 | MF919524_p93 | helix-turn-helix DNA binding domain protein | phrog_1590 | unknown function | unknown function | 1 | 55561 | 56382 |
| ATS92651.1 | MF919524_p47 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 35746 | 35916 |
| ATS92667.1 | MF919524_p63 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 42717 | 42824 |
| ATS92727.1 | MF919524_p123 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 68653 | 68832 |
| ATS92628.1 | MF919524_p24 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 20946 | 21779 |
| ATS92729.1 | MF919524_p125 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 68974 | 69108 |
| ATS92653.1 | MF919524_p49 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 36209 | 36355 |
| ATS92669.1 | MF919524_p65 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 43064 | 43225 |
| ATS92707.1 | MF919524_p103 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 61721 | 61918 |
| ATS92731.1 | MF919524_p127 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 69493 | 69756 |
| ATS92673.1 | MF919524_p69 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 45034 | 45447 |
| ATS92675.1 | MF919524_p71 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 46155 | 46466 |
| ATS92695.1 | MF919524_p91 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 54104 | 54202 |
| ATS92688.1 | MF919524_p84 | WhiB family transcription factor | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 51450 | 51710 |
| ATS92706.1 | MF919524_p102 | protease | phrog_94 | head maturation protease | head and packaging | 1 | 60913 | 61719 |
| ATS92637.1 | MF919524_p33 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 31036 | 31374 |
| ATS92607.1 | MF919524_p3 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 446 | 604 |
| ATS92700.1 | MF919524_p96 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 56811 | 57263 |
| ATS92635.1 | MF919524_p31 | lysin A | phrog_317 | endolysin | lysis | 1 | 29153 | 30655 |