| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF919525 |
Definition |
Mycobacterium phage Murica, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
NUCCORE |
Length |
77053 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
147 |
%GC |
63 |
Number of singletons |
0 |
Number of paralogs |
5 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATN91043.1 | MF919525_p8 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 4535 | 4756 |
| ATN91044.1 | MF919525_p9 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4743 | 6299 |
| ATN91134.1 | MF919525_p99 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 58483 | 58926 |
| ATN91150.1 | MF919525_p115 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 66253 | 67038 |
| ATN91097.1 | MF919525_p62 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 42518 | 42796 |
| ATN91089.1 | MF919525_p54 | integrase | phrog_1 | integrase | integration and excision | 1 | 38537 | 39418 |
| ATN91067.1 | MF919525_p32 | holin | phrog_526 | holin | lysis | 1 | 31131 | 31514 |
| ATN91179.1 | MF919525_p144 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 75538 | 75735 |
| ATN91148.1 | MF919525_p113 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 65386 | 65760 |
| ATN91154.1 | MF919525_p119 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 68368 | 68541 |
| ATN91109.1 | MF919525_p74 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 47410 | 47880 |
| ATN91170.1 | MF919525_p135 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 72565 | 72894 |
| ATN91069.1 | MF919525_p34 | lysin B | phrog_102 | endolysin | lysis | 1 | 31842 | 32699 |
| ATN91171.1 | MF919525_p136 | hypothetical protein | phrog_4006 | unknown function | unknown function | -1 | 72899 | 73423 |
| ATN91127.1 | MF919525_p92 | hypothetical protein | phrog_2495 | unknown function | unknown function | 1 | 54955 | 55323 |
| ATN91076.1 | MF919525_p41 | hypothetical protein | phrog_5831 | unknown function | unknown function | -1 | 34884 | 35066 |
| ATN91093.1 | MF919525_p58 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 41299 | 41397 |
| ATN91142.1 | MF919525_p107 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 63488 | 63778 |
| ATN91046.1 | MF919525_p11 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7391 | 8884 |
| ATN91092.1 | MF919525_p57 | immunity repressor | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 40642 | 40989 |
| ATN91152.1 | MF919525_p117 | DNA recombinase | phrog_97 | UvsX-like recombinase | other | 1 | 67285 | 68247 |
| ATN91130.1 | MF919525_p95 | helix-turn-helix DNA binding domain protein | phrog_1590 | unknown function | unknown function | 1 | 56795 | 57598 |
| ATN91126.1 | MF919525_p91 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 53910 | 54848 |
| ATN91041.1 | MF919525_p6 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1507 | 1815 |
| ATN91085.1 | MF919525_p50 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 36922 | 37137 |
| ATN91145.1 | MF919525_p110 | hypothetical protein | phrog_15491 | unknown function | unknown function | 1 | 64410 | 64526 |
| ATN91178.1 | MF919525_p143 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 75296 | 75541 |
| ATN91140.1 | MF919525_p105 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 62937 | 63134 |
| ATN91102.1 | MF919525_p67 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 44011 | 44172 |
| ATN91125.1 | MF919525_p90 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 53561 | 53755 |
| ATN91122.1 | MF919525_p87 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 52626 | 52847 |
| ATN91038.1 | MF919525_p3 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 557 | 739 |
| ATN91180.1 | MF919525_p145 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 75839 | 76186 |
| ATN91174.1 | MF919525_p139 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 73816 | 74364 |
| ATN91098.1 | MF919525_p63 | hypothetical protein | phrog_4633 | unknown function | unknown function | 1 | 43105 | 43293 |
| ATN91104.1 | MF919525_p69 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 44690 | 45019 |
| ATN91101.1 | MF919525_p66 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 43779 | 44078 |
| ATN91160.1 | MF919525_p125 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 69736 | 69873 |
| ATN91095.1 | MF919525_p60 | pentapeptide repeat protein | phrog_923 | unknown function | unknown function | 1 | 41528 | 42373 |
| ATN91181.1 | MF919525_p146 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 76261 | 76482 |
| ATN91036.1 | MF919525_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 34 | 270 |
| ATN91111.1 | MF919525_p76 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 48251 | 48619 |
| ATN91091.1 | MF919525_p56 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 39774 | 40547 |
| ATN91070.1 | MF919525_p35 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32696 | 33112 |
| ATN91078.1 | MF919525_p43 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 35272 | 35550 |
| ATN91117.1 | MF919525_p82 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 49975 | 50625 |
| ATN91081.1 | MF919525_p46 | hypothetical protein | phrog_6127 | unknown function | unknown function | -1 | 36246 | 36359 |
| ATN91144.1 | MF919525_p109 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 64147 | 64437 |
| ATN91057.1 | MF919525_p22 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18081 | 19742 |
| ATN91059.1 | MF919525_p24 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 21418 | 22251 |
| ATN91075.1 | MF919525_p40 | hypothetical protein | phrog_3472 | unknown function | unknown function | -1 | 34633 | 34887 |
| ATN91175.1 | MF919525_p140 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 74368 | 74763 |
| ATN91164.1 | MF919525_p129 | hypothetical protein | phrog_6448 | unknown function | unknown function | 1 | 70327 | 70440 |
| ATN91039.1 | MF919525_p4 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 732 | 1193 |
| ATN91055.1 | MF919525_p20 | HNH endonuclease VII | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 12799 | 13314 |
| ATN91084.1 | MF919525_p49 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 36693 | 36929 |
| ATN91141.1 | MF919525_p106 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 63131 | 63487 |
| ATN91063.1 | MF919525_p28 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28534 | 28962 |
| ATN91099.1 | MF919525_p64 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 43340 | 43645 |
| ATN91077.1 | MF919525_p42 | hypothetical protein | phrog_3447 | unknown function | unknown function | -1 | 35063 | 35275 |
| ATN91147.1 | MF919525_p112 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 65112 | 65375 |
| ATN91051.1 | MF919525_p16 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 10413 | 10817 |
| ATN91129.1 | MF919525_p94 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 55415 | 56740 |
| ATN91054.1 | MF919525_p18 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 11935 | 12809 |
| ATN91115.1 | MF919525_p80 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49435 | 49752 |
| ATN91083.1 | MF919525_p48 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36529 | 36696 |
| ATN91128.1 | MF919525_p93 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 55320 | 55418 |
| ATN91176.1 | MF919525_p141 | hypothetical protein | phrog_4496 | unknown function | unknown function | -1 | 74768 | 75121 |
| ATN91119.1 | MF919525_p84 | dsDNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 50947 | 52209 |
| ATN91047.1 | MF919525_p12 | head-to-tail connector protein | phrog_2796 | head-tail connector protein | connector | 1 | 8951 | 9142 |
| ATN91053.1 | MF919525_p19 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 11935 | 12396 |
| ATN91074.1 | MF919525_p39 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 34172 | 34636 |
| ATN91105.1 | MF919525_p70 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 45016 | 45984 |
| ATN91071.1 | MF919525_p36 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 33119 | 33364 |
| ATN91121.1 | MF919525_p86 | WhiB family transcription factor | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 52376 | 52651 |
| ATN91177.1 | MF919525_p142 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 75126 | 75299 |
| ATN91137.1 | MF919525_p102 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 59799 | 61607 |
| ATN91123.1 | MF919525_p88 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 52840 | 53205 |
| ATN91133.1 | MF919525_p98 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 58027 | 58479 |
| ATN91151.1 | MF919525_p116 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 67035 | 67277 |
| ATN91060.1 | MF919525_p25 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 22268 | 24664 |
| ATN91114.1 | MF919525_p79 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 49025 | 49438 |
| ATN91073.1 | MF919525_p38 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 33945 | 34175 |
| ATN91094.1 | MF919525_p59 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 41394 | 41531 |
| ATN91108.1 | MF919525_p73 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 47099 | 47410 |
| ATN91088.1 | MF919525_p53 | membrane domain protein | phrog_2847 | unknown function | unknown function | -1 | 37984 | 38286 |
| ATN91050.1 | MF919525_p15 | head-to-tail connector protein | phrog_2805 | minor tail protein | tail | 1 | 10055 | 10435 |
| ATN91166.1 | MF919525_p131 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 70964 | 71353 |
| ATN91113.1 | MF919525_p78 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 48795 | 49028 |
| ATN91048.1 | MF919525_p13 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 9142 | 9708 |
| ATN91052.1 | MF919525_p17 | major tail protein | phrog_476 | major tail protein | tail | 1 | 10844 | 11815 |
| ATN91149.1 | MF919525_p114 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 65763 | 66242 |
| ATN91139.1 | MF919525_p104 | protease | phrog_94 | head maturation protease | head and packaging | 1 | 62129 | 62935 |
| ATN91061.1 | MF919525_p26 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24661 | 27501 |
| ATN91182.1 | MF919525_p147 | HNH endonuclease | phrog_589 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 76472 | 76819 |
| ATN91161.1 | MF919525_p126 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 69870 | 70049 |
| ATN91162.1 | MF919525_p127 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 70049 | 70180 |
| ATN91086.1 | MF919525_p51 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 37156 | 37302 |
| ATN91068.1 | MF919525_p33 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 31507 | 31845 |
| ATN91135.1 | MF919525_p100 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 58928 | 59263 |
| ATN91138.1 | MF919525_p103 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 61600 | 62040 |
| ATN91045.1 | MF919525_p10 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 6302 | 7303 |
| ATN91103.1 | MF919525_p68 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 44361 | 44693 |
| ATN91159.1 | MF919525_p124 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 69539 | 69739 |
| ATN91163.1 | MF919525_p128 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 70191 | 70325 |
| ATN91082.1 | MF919525_p47 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 36356 | 36529 |
| ATN91168.1 | MF919525_p133 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 71728 | 72096 |
| ATN91131.1 | MF919525_p96 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 57595 | 57855 |
| ATN91143.1 | MF919525_p108 | helix-turn-helix DNA binding domain protein | phrog_1969 | unknown function | unknown function | 1 | 63783 | 64094 |
| ATN91156.1 | MF919525_p121 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 68727 | 68981 |
| ATN91080.1 | MF919525_p45 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 35978 | 36253 |
| ATN91100.1 | MF919525_p65 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 43664 | 43771 |
| ATN91173.1 | MF919525_p138 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 73564 | 73800 |
| ATN91096.1 | MF919525_p61 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 42375 | 42521 |
| ATN91064.1 | MF919525_p29 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 28949 | 29134 |
| ATN91042.1 | MF919525_p7 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1860 | 4523 |
| ATN91118.1 | MF919525_p83 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 50622 | 50954 |
| ATN91066.1 | MF919525_p31 | lysin A | phrog_317 | endolysin | lysis | 1 | 29625 | 31127 |
| ATN91167.1 | MF919525_p132 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 71471 | 71731 |
| ATN91040.1 | MF919525_p5 | hypothetical protein | phrog_4101 | unknown function | unknown function | -1 | 1265 | 1507 |
| ATN91090.1 | MF919525_p55 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 39557 | 39796 |
| ATN91065.1 | MF919525_p30 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29267 | 29551 |
| ATN91107.1 | MF919525_p72 | ERF family ssDNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 46384 | 47106 |
| ATN91120.1 | MF919525_p85 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 52206 | 52394 |
| ATN91106.1 | MF919525_p71 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 45981 | 46391 |
| ATN91116.1 | MF919525_p81 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 49742 | 49978 |
| ATN91087.1 | MF919525_p52 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 37302 | 37697 |
| ATN91165.1 | MF919525_p130 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 70704 | 70967 |
| ATN91136.1 | MF919525_p101 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59296 | 59802 |
| ATN91155.1 | MF919525_p120 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 68534 | 68746 |
| ATN91153.1 | MF919525_p118 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 68244 | 68381 |
| ATN91169.1 | MF919525_p134 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 72093 | 72551 |
| ATN91058.1 | MF919525_p23 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19814 | 21409 |
| ATN91158.1 | MF919525_p123 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 69388 | 69555 |
| ATN91172.1 | MF919525_p137 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 73449 | 73574 |
| ATN91124.1 | MF919525_p89 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 53202 | 53564 |
| ATN91157.1 | MF919525_p122 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 68930 | 69391 |
| ATN91037.1 | MF919525_p2 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 267 | 560 |
| ATN91132.1 | MF919525_p97 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 57872 | 58030 |
| ATN91112.1 | MF919525_p77 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 48619 | 48792 |
| ATN91049.1 | MF919525_p14 | head-to-tail connector protein | phrog_1531 | head closure | connector | 1 | 9723 | 10058 |
| ATN91079.1 | MF919525_p44 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | -1 | 35547 | 35981 |
| ATN91056.1 | MF919525_p21 | tapemeasure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 13315 | 18051 |
| ATN91110.1 | MF919525_p75 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 47880 | 48248 |
| ATN91062.1 | MF919525_p27 | minor tail protein | phrog_553 | minor tail protein | tail | 1 | 27502 | 28464 |
| ATN91072.1 | MF919525_p37 | DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 33544 | 33930 |
| ATN91146.1 | MF919525_p111 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 64891 | 65115 |