| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF919526 |
Definition |
Mycobacterium phage Phasih, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus; unclassified Cheoctovirus. |
DB of origin |
NUCCORE |
Length |
56125 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
100 |
%GC |
61.05 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATN91209.1 | MF919526_p31 | lysin A | phrog_700 | endolysin | lysis | 1 | 26881 | 28074 |
| ATN91225.1 | MF919526_p47 | hypothetical protein | phrog_5563 | unknown function | unknown function | 1 | 36301 | 36393 |
| ATN91202.1 | MF919526_p23 | minor tail protein | phrog_2005 | minor tail protein | tail | 1 | 23904 | 24158 |
| ATN91222.1 | MF919526_p44 | CRO protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 34795 | 35028 |
| ATN91266.1 | MF919526_p88 | hypothetical protein | phrog_2278 | unknown function | unknown function | 1 | 49971 | 50204 |
| ATN91234.1 | MF919526_p56 | hypothetical protein | phrog_2096 | unknown function | unknown function | 1 | 39873 | 40358 |
| ATN91186.1 | MF919526_p5 | scaffolding protein | phrog_2592 | head scaffolding protein | head and packaging | 1 | 4451 | 5044 |
| ATN91184.1 | MF919526_p3 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 2255 | 3625 |
| ATN91204.1 | MF919526_p25 | minor tail protein | phrog_754 | minor tail protein | tail | 1 | 24806 | 25630 |
| ATN91206.1 | MF919526_p27 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 25982 | 26278 |
| ATN91233.1 | MF919526_p55 | WhiB family transcription factor | phrog_1333 | unknown function | unknown function | 1 | 39382 | 39876 |
| ATN91236.1 | MF919526_p58 | helix-turn-helix DNA binding domain protein | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 40630 | 40995 |
| ATN91190.1 | MF919526_p9 | head-to-tail connector protein | phrog_1929 | head-tail connector protein | connector | 1 | 6795 | 7121 |
| ATN91216.1 | MF919526_p38 | hypothetical protein | phrog_1839 | unknown function | unknown function | 1 | 31061 | 31153 |
| ATN91273.1 | MF919526_p95 | hypothetical protein | phrog_1186 | unknown function | unknown function | 1 | 52516 | 52917 |
| ATN91196.1 | MF919526_p16 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 13550 | 15259 |
| ATN91211.1 | MF919526_p33 | holin | phrog_443 | holin | lysis | 1 | 29091 | 29324 |
| ATN91187.1 | MF919526_p6 | major capsid protein | phrog_267 | major head protein | head and packaging | 1 | 5063 | 5884 |
| ATN91198.1 | MF919526_p19 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 17939 | 20476 |
| ATN91189.1 | MF919526_p8 | head-to-tail connector protein | phrog_763 | head-tail adaptor | connector | 1 | 6459 | 6788 |
| ATN91194.1 | MF919526_p12 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 8571 | 9507 |
| ATN91279.1 | MF919526_p1 | terminase small subunit | phrog_226 | minor tail protein | tail | 1 | 109 | 564 |
| ATN91199.1 | MF919526_p20 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 20473 | 22359 |
| ATN91183.1 | MF919526_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 587 | 2224 |
| ATN91221.1 | MF919526_p43 | immunity repressor | phrog_2838 | transcriptional repressor | transcription regulation | -1 | 34056 | 34796 |
| ATN91259.1 | MF919526_p81 | hypothetical protein | phrog_6727 | unknown function | unknown function | 1 | 48730 | 48918 |
| ATN91275.1 | MF919526_p97 | glycosyltransferase | phrog_1579 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 53206 | 54828 |
| ATN91248.1 | MF919526_p70 | hypothetical protein | phrog_2149 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 45082 | 45987 |
| ATN91223.1 | MF919526_p45 | antirepressor | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 35085 | 36089 |
| ATN91255.1 | MF919526_p77 | hypothetical protein | phrog_7842 | unknown function | unknown function | 1 | 47635 | 47808 |
| ATN91282.1 | MF919526_p28 | hypothetical protein | phrog_932 | unknown function | unknown function | 1 | 26285 | 26434 |
| ATN91230.1 | MF919526_p52 | hypothetical protein | phrog_1797 | unknown function | unknown function | 1 | 37932 | 38681 |
| ATN91200.1 | MF919526_p21 | minor tail protein | phrog_2106 | minor tail protein | tail | 1 | 22356 | 23522 |
| ATN91239.1 | MF919526_p61 | hypothetical protein | phrog_2060 | DNA methyltransferase | other | 1 | 41374 | 41724 |
| ATN91208.1 | MF919526_p30 | hypothetical protein | phrog_747 | unknown function | unknown function | 1 | 26651 | 26884 |
| ATN91270.1 | MF919526_p92 | hypothetical protein | phrog_1869 | unknown function | unknown function | 1 | 51937 | 52101 |
| ATN91251.1 | MF919526_p73 | hypothetical protein | phrog_2730 | unknown function | unknown function | 1 | 46643 | 46846 |
| ATN91229.1 | MF919526_p51 | hypothetical protein | phrog_780 | unknown function | unknown function | 1 | 37693 | 37935 |
| ATN91260.1 | MF919526_p82 | hypothetical protein | phrog_1901 | unknown function | unknown function | 1 | 48915 | 49109 |
| ATN91219.1 | MF919526_p41 | integrase | phrog_1 | integrase | integration and excision | 1 | 31965 | 33266 |
| ATN91278.1 | MF919526_p100 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55657 | 55983 |
| ATN91207.1 | MF919526_p29 | hypothetical protein | phrog_1172 | unknown function | unknown function | 1 | 26431 | 26571 |
| ATN91193.1 | MF919526_p13 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 8571 | 9122 |
| ATN91244.1 | MF919526_p66 | hypothetical protein | phrog_2070 | unknown function | unknown function | 1 | 44131 | 44292 |
| ATN91263.1 | MF919526_p85 | hypothetical protein | phrog_1545 | unknown function | unknown function | 1 | 49545 | 49685 |
| ATN91201.1 | MF919526_p22 | minor tail protein | phrog_240 | head protein | head and packaging | 1 | 23540 | 23881 |
| ATN91257.1 | MF919526_p79 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | 1 | 48302 | 48469 |
| ATN91238.1 | MF919526_p60 | hypothetical protein | phrog_1834 | unknown function | unknown function | 1 | 41147 | 41377 |
| ATN91205.1 | MF919526_p26 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25636 | 25833 |
| ATN91192.1 | MF919526_p11 | major tail protein | phrog_476 | major tail protein | tail | 1 | 7625 | 8434 |
| ATN91246.1 | MF919526_p68 | hypothetical protein | phrog_464 | unknown function | unknown function | 1 | 44413 | 44874 |
| ATN91264.1 | MF919526_p86 | hypothetical protein | phrog_9881 | unknown function | unknown function | 1 | 49685 | 49855 |
| ATN91252.1 | MF919526_p74 | hypothetical protein | phrog_1943 | unknown function | unknown function | 1 | 46843 | 47037 |
| ATN91213.1 | MF919526_p35 | hypothetical protein | phrog_2004 | unknown function | unknown function | 1 | 29719 | 29952 |
| ATN91235.1 | MF919526_p57 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 40355 | 40633 |
| ATN91228.1 | MF919526_p50 | hypothetical protein | phrog_10460 | unknown function | unknown function | 1 | 37464 | 37700 |
| ATN91250.1 | MF919526_p72 | hypothetical protein | phrog_2080 | unknown function | unknown function | 1 | 46339 | 46563 |
| ATN91258.1 | MF919526_p80 | hypothetical protein | phrog_2939 | unknown function | unknown function | 1 | 48522 | 48737 |
| ATN91268.1 | MF919526_p90 | hypothetical protein | phrog_908 | unknown function | unknown function | 1 | 50463 | 51149 |
| ATN91231.1 | MF919526_p53 | hypothetical protein | phrog_1849 | unknown function | unknown function | 1 | 38756 | 39034 |
| ATN91215.1 | MF919526_p37 | hypothetical protein | phrog_1791 | unknown function | unknown function | 1 | 30847 | 31068 |
| ATN91267.1 | MF919526_p89 | hypothetical protein | phrog_2247 | unknown function | unknown function | 1 | 50197 | 50466 |
| ATN91241.1 | MF919526_p63 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42599 | 42745 |
| ATN91280.1 | MF919526_p14 | HNH endonuclease | phrog_3593 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 9525 | 10064 |
| ATN91226.1 | MF919526_p48 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 36631 | 37014 |
| ATN91188.1 | MF919526_p7 | head-to-tail connector protein | phrog_2377 | head-tail adaptor Ad1 | connector | 1 | 5896 | 6462 |
| ATN91243.1 | MF919526_p65 | DNA methylase | phrog_116 | DNA methyltransferase | other | 1 | 42908 | 44134 |
| ATN91276.1 | MF919526_p98 | hypothetical protein | phrog_1693 | unknown function | unknown function | 1 | 54825 | 55037 |
| ATN91220.1 | MF919526_p42 | hypothetical protein | phrog_1948 | unknown function | unknown function | -1 | 33346 | 33792 |
| ATN91245.1 | MF919526_p67 | hypothetical protein | phrog_1311 | unknown function | unknown function | 1 | 44273 | 44413 |
| ATN91214.1 | MF919526_p36 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 29939 | 30760 |
| ATN91218.1 | MF919526_p40 | hypothetical protein | phrog_2437 | unknown function | unknown function | -1 | 31402 | 31569 |
| ATN91274.1 | MF919526_p96 | hypothetical protein | phrog_1385 | unknown function | unknown function | 1 | 52914 | 53180 |
| ATN91217.1 | MF919526_p39 | hypothetical protein | phrog_3693 | unknown function | unknown function | -1 | 31256 | 31411 |
| ATN91271.1 | MF919526_p93 | hypothetical protein | phrog_1694 | unknown function | unknown function | 1 | 52107 | 52265 |
| ATN91185.1 | MF919526_p4 | capsid maturation protease | phrog_1522 | head maturation protease | head and packaging | 1 | 3612 | 4367 |
| ATN91247.1 | MF919526_p69 | hypothetical protein | phrog_5500 | unknown function | unknown function | 1 | 44909 | 45085 |
| ATN91203.1 | MF919526_p24 | minor tail protein | phrog_2012 | minor tail protein | tail | 1 | 24171 | 24809 |
| ATN91256.1 | MF919526_p78 | hypothetical protein | phrog_14412 | unknown function | unknown function | 1 | 47805 | 48305 |
| ATN91249.1 | MF919526_p71 | hypothetical protein | phrog_4296 | unknown function | unknown function | 1 | 45984 | 46346 |
| ATN91265.1 | MF919526_p87 | hypothetical protein | phrog_4126 | unknown function | unknown function | 1 | 49855 | 49974 |
| ATN91281.1 | MF919526_p18 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 17094 | 17942 |
| ATN91242.1 | MF919526_p64 | hypothetical protein | phrog_2704 | unknown function | unknown function | 1 | 42759 | 42911 |
| ATN91191.1 | MF919526_p10 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 7111 | 7515 |
| ATN91237.1 | MF919526_p59 | hypothetical protein | phrog_2078 | unknown function | unknown function | 1 | 40995 | 41150 |
| ATN91254.1 | MF919526_p76 | hypothetical protein | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 47316 | 47648 |
| ATN91240.1 | MF919526_p62 | AAA-ATPase | phrog_1366 | unknown function | unknown function | 1 | 41721 | 42602 |
| ATN91261.1 | MF919526_p83 | hypothetical protein | phrog_6625 | unknown function | unknown function | 1 | 49082 | 49372 |
| ATN91272.1 | MF919526_p94 | hypothetical protein | phrog_3813 | unknown function | unknown function | 1 | 52262 | 52519 |
| ATN91227.1 | MF919526_p49 | hypothetical protein | phrog_7382 | unknown function | unknown function | 1 | 37199 | 37456 |
| ATN91224.1 | MF919526_p46 | hypothetical protein | phrog_2025 | unknown function | unknown function | 1 | 36143 | 36304 |
| ATN91277.1 | MF919526_p99 | glycosyltransferase | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 55034 | 55657 |
| ATN91197.1 | MF919526_p17 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 15342 | 17051 |
| ATN91269.1 | MF919526_p91 | hypothetical protein | phrog_8604 | unknown function | unknown function | 1 | 51164 | 51748 |
| ATN91195.1 | MF919526_p15 | tapemeasure protein | phrog_1942 | tail length tape measure protein | tail | 1 | 10064 | 13549 |
| ATN91232.1 | MF919526_p54 | hypothetical protein | phrog_658 | unknown function | unknown function | 1 | 39031 | 39381 |
| ATN91253.1 | MF919526_p75 | hypothetical protein | phrog_5892 | unknown function | unknown function | 1 | 47034 | 47231 |
| ATN91212.1 | MF919526_p34 | membrane protein | phrog_404 | minor tail protein | tail | 1 | 29321 | 29695 |
| ATN91262.1 | MF919526_p84 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 49369 | 49548 |
| ATN91210.1 | MF919526_p32 | lysin B | phrog_102 | endolysin | lysis | 1 | 28074 | 29075 |