| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF919535 |
Definition |
Mycobacterium phage Terminus, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus. |
DB of origin |
NUCCORE |
Length |
76169 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
147 |
%GC |
63.05 |
Number of singletons |
0 |
Number of paralogs |
5 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATN92039.1 | MF919535_p54 | integrase | phrog_1 | integrase | integration and excision | 1 | 38602 | 39483 |
| ATN92016.1 | MF919535_p31 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29370 | 29654 |
| ATN92097.1 | MF919535_p112 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 64683 | 65057 |
| ATN92096.1 | MF919535_p111 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 64409 | 64672 |
| ATN92119.1 | MF919535_p134 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 71863 | 72192 |
| ATN92070.1 | MF919535_p85 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 52277 | 52465 |
| ATN92068.1 | MF919535_p83 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 50690 | 51025 |
| ATN92029.1 | MF919535_p44 | hypothetical protein | phrog_1573 | DNA methyltransferase | other | -1 | 35612 | 36046 |
| ATN92067.1 | MF919535_p82 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 50043 | 50693 |
| ATN92051.1 | MF919535_p66 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 43844 | 44143 |
| ATN92083.1 | MF919535_p98 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 58101 | 58553 |
| ATN92105.1 | MF919535_p120 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 68024 | 68278 |
| ATN92020.1 | MF919535_p35 | lysin B | phrog_102 | endolysin | lysis | 1 | 31945 | 32802 |
| ATN92075.1 | MF919535_p90 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 53632 | 53826 |
| ATN91997.1 | MF919535_p12 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 7435 | 8928 |
| ATN92030.1 | MF919535_p45 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 36043 | 36318 |
| ATN92043.1 | MF919535_p58 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 41364 | 41462 |
| ATN91993.1 | MF919535_p8 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 1904 | 4567 |
| ATN92116.1 | MF919535_p131 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 70768 | 71022 |
| ATN92011.1 | MF919535_p26 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 22371 | 24767 |
| ATN92035.1 | MF919535_p50 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 36987 | 37202 |
| ATN92094.1 | MF919535_p109 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 63444 | 63734 |
| ATN92023.1 | MF919535_p38 | DNA bridging protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 33647 | 34033 |
| ATN92055.1 | MF919535_p70 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 45081 | 46049 |
| ATN92089.1 | MF919535_p104 | protease | phrog_94 | head maturation protease | head and packaging | 1 | 61426 | 62232 |
| ATN92104.1 | MF919535_p119 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 67831 | 68043 |
| ATN92012.1 | MF919535_p27 | minor tail protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24764 | 27604 |
| ATN92000.1 | MF919535_p15 | head-to-tail connector protein | phrog_1531 | head closure | connector | 1 | 9811 | 10146 |
| ATN92120.1 | MF919535_p135 | hypothetical protein | phrog_4547 | unknown function | unknown function | -1 | 72194 | 72511 |
| ATN92088.1 | MF919535_p103 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 60897 | 61337 |
| ATN92063.1 | MF919535_p78 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 48863 | 49096 |
| ATN92107.1 | MF919535_p122 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 68685 | 68852 |
| ATN92044.1 | MF919535_p59 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 41459 | 41596 |
| ATN92048.1 | MF919535_p63 | hypothetical protein | phrog_4633 | unknown function | unknown function | 1 | 43170 | 43358 |
| ATN92099.1 | MF919535_p114 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 65550 | 66335 |
| ATN91999.1 | MF919535_p14 | head-to-tail connector protein | phrog_442 | head-tail adaptor | connector | 1 | 9230 | 9796 |
| ATN92101.1 | MF919535_p116 | DNA recombinase | phrog_97 | UvsX-like recombinase | other | 1 | 66582 | 67544 |
| ATN92046.1 | MF919535_p61 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 42440 | 42586 |
| ATN92123.1 | MF919535_p138 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 72884 | 73420 |
| ATN92008.1 | MF919535_p23 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 18184 | 19845 |
| ATN92021.1 | MF919535_p36 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32799 | 33215 |
| ATN92122.1 | MF919535_p137 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 72632 | 72868 |
| ATN92110.1 | MF919535_p125 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 69167 | 69346 |
| ATN92117.1 | MF919535_p132 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 71025 | 71393 |
| ATN92087.1 | MF919535_p102 | DNA methylase | phrog_67 | DNA methyltransferase | other | 1 | 59873 | 60904 |
| ATN92126.1 | MF919535_p141 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 73982 | 74227 |
| ATN92013.1 | MF919535_p28 | minor tail protein | phrog_553 | minor tail protein | tail | 1 | 27605 | 28567 |
| ATN92076.1 | MF919535_p91 | polynucleotide kinase | phrog_505 | polynucleotide kinase | other | 1 | 53981 | 54922 |
| ATN92102.1 | MF919535_p117 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 67541 | 67678 |
| ATN92060.1 | MF919535_p75 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 47948 | 48316 |
| ATN92121.1 | MF919535_p136 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 72517 | 72627 |
| ATN92112.1 | MF919535_p127 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 69488 | 69622 |
| ATN92015.1 | MF919535_p30 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 29052 | 29237 |
| ATN92033.1 | MF919535_p48 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 36594 | 36761 |
| ATN91987.1 | MF919535_p2 | hypothetical protein | phrog_4110 | unknown function | unknown function | 1 | 267 | 449 |
| ATN92065.1 | MF919535_p80 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 49503 | 49820 |
| ATN92025.1 | MF919535_p40 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 34275 | 34739 |
| ATN92066.1 | MF919535_p81 | hypothetical protein | phrog_1673 | unknown function | unknown function | 1 | 49810 | 50046 |
| ATN91989.1 | MF919535_p4 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 601 | 783 |
| ATN92108.1 | MF919535_p123 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 68836 | 69036 |
| ATN92028.1 | MF919535_p43 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 35337 | 35615 |
| ATN92032.1 | MF919535_p47 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 36421 | 36594 |
| ATN91995.1 | MF919535_p10 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 4784 | 6343 |
| ATN92022.1 | MF919535_p37 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 33222 | 33467 |
| ATN92042.1 | MF919535_p57 | immunity repressor | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 40707 | 41054 |
| ATN92113.1 | MF919535_p128 | hypothetical protein | phrog_6448 | unknown function | unknown function | 1 | 69624 | 69737 |
| ATN92053.1 | MF919535_p68 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 44426 | 44758 |
| ATN92019.1 | MF919535_p34 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 31610 | 31948 |
| ATN92079.1 | MF919535_p94 | RNA ligase | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 55489 | 56814 |
| ATN92050.1 | MF919535_p65 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 43729 | 43836 |
| ATN92093.1 | MF919535_p108 | helix-turn-helix DNA binding domain protein | phrog_1969 | unknown function | unknown function | 1 | 63080 | 63391 |
| ATN92001.1 | MF919535_p16 | head-to-tail connector protein | phrog_2805 | minor tail protein | tail | 1 | 10143 | 10523 |
| ATN92081.1 | MF919535_p96 | WhiB family transcription factor | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 57669 | 57929 |
| ATN92064.1 | MF919535_p79 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 49093 | 49506 |
| ATN92118.1 | MF919535_p133 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 71390 | 71848 |
| ATN92038.1 | MF919535_p53 | membrane domain protein | phrog_2847 | unknown function | unknown function | -1 | 38049 | 38351 |
| ATN92124.1 | MF919535_p139 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 73424 | 73807 |
| ATN92057.1 | MF919535_p72 | ERF family ssDNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 46452 | 47174 |
| ATN92095.1 | MF919535_p110 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 64188 | 64412 |
| ATN92115.1 | MF919535_p130 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 70261 | 70650 |
| ATN92077.1 | MF919535_p92 | hypothetical protein | phrog_2495 | unknown function | unknown function | 1 | 55029 | 55397 |
| ATN92080.1 | MF919535_p95 | helix-turn-helix DNA binding domain protein | phrog_1590 | unknown function | unknown function | 1 | 56851 | 57672 |
| ATN92027.1 | MF919535_p42 | hypothetical protein | phrog_3447 | unknown function | unknown function | -1 | 34987 | 35340 |
| ATN92131.1 | MF919535_p146 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 75377 | 75598 |
| ATN92129.1 | MF919535_p144 | hypothetical protein | phrog_5130 | unknown function | unknown function | -1 | 74699 | 74890 |
| ATN92034.1 | MF919535_p49 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 36758 | 36994 |
| ATN92084.1 | MF919535_p99 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 58557 | 59000 |
| ATN92031.1 | MF919535_p46 | hypothetical protein | phrog_6127 | unknown function | unknown function | -1 | 36311 | 36424 |
| ATN92010.1 | MF919535_p25 | minor tail protein | phrog_732 | minor tail protein | tail | 1 | 21521 | 22354 |
| ATN92125.1 | MF919535_p140 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 73812 | 73985 |
| ATN92058.1 | MF919535_p73 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 47167 | 47478 |
| ATN92003.1 | MF919535_p18 | major tail protein | phrog_476 | major tail protein | tail | 1 | 10932 | 11906 |
| ATN92082.1 | MF919535_p97 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 57946 | 58104 |
| ATN92092.1 | MF919535_p107 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 62785 | 63075 |
| ATN92074.1 | MF919535_p89 | holliday junction resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 53273 | 53635 |
| ATN92128.1 | MF919535_p143 | hypothetical protein | phrog_5970 | unknown function | unknown function | -1 | 74439 | 74696 |
| ATN91998.1 | MF919535_p13 | head-to-tail connector protein | phrog_2796 | head-tail connector protein | connector | 1 | 9051 | 9230 |
| ATN92045.1 | MF919535_p60 | pentapeptide repeat protein | phrog_923 | unknown function | unknown function | 1 | 41593 | 42438 |
| ATN91991.1 | MF919535_p6 | hypothetical protein | phrog_4101 | unknown function | unknown function | -1 | 1309 | 1551 |
| ATN92085.1 | MF919535_p100 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 59002 | 59337 |
| ATN92062.1 | MF919535_p77 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 48687 | 48866 |
| ATN92132.1 | MF919535_p147 | hypothetical protein | phrog_8627 | unknown function | unknown function | 1 | 75643 | 76056 |
| ATN91986.1 | MF919535_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 34 | 270 |
| ATN92090.1 | MF919535_p105 | hypothetical protein | phrog_1454 | unknown function | unknown function | 1 | 62234 | 62431 |
| ATN92109.1 | MF919535_p124 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 69033 | 69170 |
| ATN92041.1 | MF919535_p56 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 39839 | 40612 |
| ATN91990.1 | MF919535_p5 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 776 | 1237 |
| ATN92007.1 | MF919535_p22 | tapemeasure protein | phrog_2723 | tail length tape measure protein | tail | 1 | 13424 | 18154 |
| ATN92127.1 | MF919535_p142 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 74224 | 74421 |
| ATN92018.1 | MF919535_p33 | holin | phrog_526 | holin | lysis | 1 | 31234 | 31617 |
| ATN92047.1 | MF919535_p62 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 42583 | 42861 |
| ATN92103.1 | MF919535_p118 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 67665 | 67838 |
| ATN92017.1 | MF919535_p32 | lysin A | phrog_317 | endolysin | lysis | 1 | 29728 | 31230 |
| ATN92111.1 | MF919535_p126 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 69346 | 69477 |
| ATN92004.1 | MF919535_p19 | hypothetical protein | phrog_5711 | head fiber protein | head and packaging | 1 | 11966 | 12439 |
| ATN92026.1 | MF919535_p41 | hypothetical protein | phrog_3472 | unknown function | unknown function | -1 | 34736 | 34990 |
| ATN91992.1 | MF919535_p7 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1551 | 1850 |
| ATN92037.1 | MF919535_p52 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 37367 | 37762 |
| ATN92114.1 | MF919535_p129 | helix-turn-helix DNA binding domain protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 70001 | 70264 |
| ATN92036.1 | MF919535_p51 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 37221 | 37367 |
| ATN92086.1 | MF919535_p101 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59334 | 59876 |
| ATN92006.1 | MF919535_p20 | tail assembly chaperone | phrog_978 | tail assembly chaperone | tail | 1 | 12560 | 13431 |
| ATN92061.1 | MF919535_p76 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 48319 | 48687 |
| ATN92052.1 | MF919535_p67 | exonuclease | phrog_2221 | unknown function | unknown function | 1 | 44109 | 44237 |
| ATN92100.1 | MF919535_p115 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 66332 | 66574 |
| ATN92072.1 | MF919535_p87 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 52697 | 52918 |
| ATN92071.1 | MF919535_p86 | WhiB family transcription factor | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 52447 | 52722 |
| ATN92002.1 | MF919535_p17 | head-to-tail connector protein | phrog_813 | head-tail adaptor | connector | 1 | 10501 | 10905 |
| ATN92073.1 | MF919535_p88 | hypothetical protein | phrog_3836 | unknown function | unknown function | 1 | 52911 | 53276 |
| ATN92024.1 | MF919535_p39 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 34081 | 34278 |
| ATN92014.1 | MF919535_p29 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28637 | 29065 |
| ATN91996.1 | MF919535_p11 | capsid maturation protease | phrog_2753 | head maturation protease | head and packaging | 1 | 6346 | 7347 |
| ATN92005.1 | MF919535_p21 | tail assembly chaperone | phrog_621 | tail assembly chaperone | tail | 1 | 12560 | 13021 |
| ATN92130.1 | MF919535_p145 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 74955 | 75302 |
| ATN92049.1 | MF919535_p64 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 43405 | 43710 |
| ATN92054.1 | MF919535_p69 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 44755 | 45084 |
| ATN92091.1 | MF919535_p106 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 62428 | 62784 |
| ATN91988.1 | MF919535_p3 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 446 | 604 |
| ATN92009.1 | MF919535_p24 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 19833 | 21512 |
| ATN92059.1 | MF919535_p74 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 47478 | 47948 |
| ATN92069.1 | MF919535_p84 | dsDNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 51018 | 52280 |
| ATN91994.1 | MF919535_p9 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 4579 | 4800 |
| ATN92040.1 | MF919535_p55 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 39622 | 39861 |
| ATN92098.1 | MF919535_p113 | hypothetical protein | phrog_2252 | endolysin; inhibits RNA polymerase | lysis | 1 | 65060 | 65539 |
| ATN92106.1 | MF919535_p121 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 68227 | 68688 |
| ATN92056.1 | MF919535_p71 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 46046 | 46459 |
| ATN92078.1 | MF919535_p93 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 55370 | 55492 |