Genomic map of Mycobacterium phage YassJohnny (MF919541)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF919541
Definition
Mycobacterium phage YassJohnny, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus; unclassified Kostyavirus.
DB of origin
NUCCORE
Length
73697
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
139
%GC
62.88
Number of singletons
0
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATN92575.1 MF919541_p8 hypothetical protein phrog_2202 unknown function unknown function -1 1956 2267
ATN92702.1 MF919541_p135 hypothetical protein phrog_2772 unknown function unknown function -1 71940 72176
ATN92654.1 MF919541_p87 hypothetical protein phrog_2844 unknown function unknown function 1 53492 53590
ATN92572.1 MF919541_p5 hypothetical protein phrog_3858 unknown function unknown function 1 783 1064
ATN92634.1 MF919541_p67 hypothetical protein phrog_2750 unknown function unknown function 1 45585 45896
ATN92620.1 MF919541_p53 hypothetical protein phrog_2852 unknown function unknown function 1 39881 40018
ATN92596.1 MF919541_p29 minor tail protein phrog_553 minor tail protein tail 1 28033 28995
ATN92582.1 MF919541_p15 head-to-tail connector protein phrog_442 head-tail adaptor connector 1 9678 10244
ATN92632.1 MF919541_p65 hypothetical protein phrog_572 unknown function unknown function 1 44464 44877
ATN92672.1 MF919541_p105 hypothetical protein phrog_1042 unknown function unknown function 1 61756 62019
ATN92585.1 MF919541_p18 head-to-tail connector protein phrog_813 head-tail adaptor connector 1 10947 11351
ATN92627.1 MF919541_p60 hypothetical protein phrog_2147 unknown function unknown function 1 42261 42494
ATN92699.1 MF919541_p132 hypothetical protein phrog_3174 unknown function unknown function -1 71012 71407
ATN92614.1 MF919541_p47 membrane domain protein phrog_2847 unknown function unknown function -1 36471 36773
ATN92626.1 MF919541_p59 hypothetical protein phrog_3463 unknown function unknown function 1 42146 42253
ATN92705.1 MF919541_p138 hypothetical protein phrog_2762 unknown function unknown function 1 72905 73126
ATN92653.1 MF919541_p86 hypothetical protein phrog_7164 unknown function unknown function 1 53298 53495
ATN92673.1 MF919541_p106 hypothetical protein phrog_355 nucleoside 2-deoxyribosyltransferase DNA, RNA and nucleotide metabolism 1 62030 62404
ATN92623.1 MF919541_p56 hypothetical protein phrog_2800 unknown function unknown function 1 41005 41283
ATN92590.1 MF919541_p23 tapemeasure protein phrog_2723 tail length tape measure protein tail 1 13849 18582
ATN92604.1 MF919541_p37 hypothetical protein phrog_726 unknown function unknown function 1 33227 33643
ATN92697.1 MF919541_p130 hypothetical protein phrog_2287 unknown function unknown function -1 70208 70414
ATN92680.1 MF919541_p113 hypothetical protein phrog_2279 unknown function unknown function 1 65178 65390
ATN92640.1 MF919541_p73 hypothetical protein phrog_289 GTP-binding domain other 1 47508 47921
ATN92588.1 MF919541_p20 tail assembly chaperone phrog_978 tail assembly chaperone tail 1 12469 13343
ATN92636.1 MF919541_p69 hypothetical protein phrog_1389 unknown function unknown function 1 46369 46737
ATN92635.1 MF919541_p68 hypothetical protein phrog_2771 unknown function unknown function 1 45896 46369
ATN92658.1 MF919541_p91 hypothetical protein phrog_2853 unknown function unknown function 1 56044 56202
ATN92573.1 MF919541_p6 terminase small subunit phrog_83 terminase small subunit head and packaging 1 1057 1518
ATN92668.1 MF919541_p101 hypothetical protein phrog_2757 unknown function unknown function 1 60132 60422
ATN92633.1 MF919541_p66 ERF family ssDNA binding protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44870 45592
ATN92676.1 MF919541_p109 hypothetical protein phrog_1941 unknown function unknown function 1 63679 63921
ATN92692.1 MF919541_p125 hypothetical protein phrog_3034 unknown function unknown function -1 68372 68740
ATN92662.1 MF919541_p95 hypothetical protein phrog_1568 DNA binding protein DNA, RNA and nucleotide metabolism 1 57147 57647
ATN92605.1 MF919541_p38 glutaredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism 1 33650 33895
ATN92648.1 MF919541_p81 hypothetical protein phrog_2747 unknown function unknown function 1 51112 51333
ATN92695.1 MF919541_p128 hypothetical protein phrog_4006 unknown function unknown function -1 69543 70088
ATN92693.1 MF919541_p126 hypothetical protein phrog_1915 unknown function unknown function -1 68737 69195
ATN92619.1 MF919541_p52 hypothetical protein phrog_3071 unknown function unknown function 1 39786 39884
ATN92646.1 MF919541_p79 hypothetical protein phrog_1091 unknown function unknown function 1 50692 50880
ATN92644.1 MF919541_p77 hypothetical protein phrog_572 unknown function unknown function 1 49090 49440
ATN92690.1 MF919541_p123 hypothetical protein phrog_2579 ParB C-terminal domain DNA, RNA and nucleotide metabolism -1 67607 67996
ATN92657.1 MF919541_p90 WhiB family transcription factor phrog_472 WhiB transcriptional factor transcription regulation 1 55767 56027
ATN92660.1 MF919541_p93 hypothetical protein phrog_7833 unknown function unknown function 1 56655 56777
ATN92664.1 MF919541_p97 ssDNA binding protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 58244 58684
ATN92669.1 MF919541_p102 helix-turn-helix DNA binding domain protein phrog_1969 unknown function unknown function 1 60427 60738
ATN92613.1 MF919541_p46 hypothetical protein phrog_2759 unknown function unknown function -1 35906 36211
ATN92639.1 MF919541_p72 hypothetical protein phrog_2793 unknown function unknown function 1 47302 47511
ATN92682.1 MF919541_p115 hypothetical protein phrog_2174 unknown function unknown function 1 65574 66035
ATN92701.1 MF919541_p134 hypothetical protein phrog_1438 unknown function unknown function -1 71770 71943
ATN92684.1 MF919541_p117 hypothetical protein phrog_2823 unknown function unknown function 1 66183 66383
ATN92700.1 MF919541_p133 hypothetical protein phrog_4496 unknown function unknown function -1 71412 71765
ATN92591.1 MF919541_p24 minor tail protein phrog_106 minor tail protein tail 1 18612 20273
ATN92600.1 MF919541_p33 lysin A phrog_317 endolysin lysis 1 30156 31658
ATN92675.1 MF919541_p108 DNA polymerase III subunit phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 62897 63682
ATN92643.1 MF919541_p76 hypothetical protein phrog_1882 unknown function unknown function 1 48458 49108
ATN92641.1 MF919541_p74 HNH endonuclease phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 47918 48235
ATN92603.1 MF919541_p36 lysin B phrog_102 endolysin lysis 1 32373 33230
ATN92704.1 MF919541_p137 hypothetical protein phrog_2904 unknown function unknown function 1 72483 72830
ATN92621.1 MF919541_p54 pentapeptide repeat protein phrog_923 unknown function unknown function 1 40015 40860
ATN92608.1 MF919541_p41 hypothetical protein phrog_861 site-specific recombination directionality factor RDF integration and excision -1 34739 34906
ATN92576.1 MF919541_p9 terminase large subunit phrog_9 terminase large subunit head and packaging 1 2303 4966
ATN92580.1 MF919541_p13 major capsid protein phrog_10 major head protein head and packaging 1 7927 9420
ATN92685.1 MF919541_p118 hypothetical protein phrog_2296 unknown function unknown function 1 66380 66517
ATN92574.1 MF919541_p7 hypothetical protein phrog_2142 unknown function unknown function 1 1538 1855
ATN92667.1 MF919541_p100 hypothetical protein phrog_2785 unknown function unknown function 1 59775 60131
ATN92606.1 MF919541_p39 DNA bridging protein phrog_1223 nucloid associated Lsr2-like DNA, RNA and nucleotide metabolism -1 34092 34478
ATN92624.1 MF919541_p57 hypothetical protein phrog_4633 unknown function unknown function 1 41592 41780
ATN92691.1 MF919541_p124 hypothetical protein phrog_2942 unknown function unknown function -1 68115 68375
ATN92645.1 MF919541_p78 dsDNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 49433 50695
ATN92659.1 MF919541_p92 hypothetical protein phrog_889 unknown function unknown function 1 56199 56651
ATN92616.1 MF919541_p49 hypothetical protein phrog_2842 unknown function unknown function 1 38044 38283
ATN92650.1 MF919541_p83 holliday junction resolvase phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 51649 52011
ATN92671.1 MF919541_p104 hypothetical protein phrog_2846 unknown function unknown function 1 61535 61759
ATN92578.1 MF919541_p11 portal protein phrog_12 portal protein head and packaging 1 5183 6742
ATN92601.1 MF919541_p34 holin phrog_526 holin lysis 1 31662 32045
ATN92609.1 MF919541_p42 hypothetical protein phrog_2893 unknown function unknown function -1 34903 35073
ATN92598.1 MF919541_p31 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 29480 29665
ATN92666.1 MF919541_p99 hypothetical protein phrog_1454 unknown function unknown function 1 59581 59778
ATN92592.1 MF919541_p25 minor tail protein phrog_110 minor tail protein tail 1 20345 21940
ATN92595.1 MF919541_p28 minor tail protein phrog_382 minor tail protein with lysin activity tail 1 25192 28032
ATN92599.1 MF919541_p32 hypothetical protein phrog_411 unknown function unknown function 1 29798 30082
ATN92607.1 MF919541_p40 hypothetical protein phrog_4396 unknown function unknown function -1 34611 34739
ATN92696.1 MF919541_p129 hypothetical protein phrog_3730 unknown function unknown function -1 70093 70218
ATN92637.1 MF919541_p70 hypothetical protein phrog_572 unknown function unknown function 1 46740 47102
ATN92570.1 MF919541_p3 hypothetical protein phrog_2829 unknown function unknown function 1 446 604
ATN92686.1 MF919541_p119 hypothetical protein phrog_2925 unknown function unknown function 1 66514 66693
ATN92625.1 MF919541_p58 hypothetical protein phrog_2744 unknown function unknown function 1 41827 42132
ATN92584.1 MF919541_p17 head-to-tail connector protein phrog_2805 minor tail protein tail 1 10688 10969
ATN92589.1 MF919541_p22 HNH endonuclease phrog_307 endonuclease VII DNA, RNA and nucleotide metabolism 1 13333 13848
ATN92583.1 MF919541_p16 head-to-tail connector protein phrog_1531 head closure connector 1 10257 10592
ATN92688.1 MF919541_p121 hypothetical protein phrog_3016 unknown function unknown function 1 66835 66969
ATN92569.1 MF919541_p2 hypothetical protein phrog_4110 unknown function unknown function 1 267 449
ATN92571.1 MF919541_p4 hypothetical protein phrog_2775 unknown function unknown function 1 601 786
ATN92674.1 MF919541_p107 hypothetical protein phrog_2252 endolysin; inhibits RNA polymerase lysis 1 62407 62886
ATN92568.1 MF919541_p1 hypothetical protein phrog_3456 unknown function unknown function 1 34 270
ATN92687.1 MF919541_p120 hypothetical protein phrog_2897 unknown function unknown function 1 66693 66824
ATN92628.1 MF919541_p61 hypothetical protein phrog_2221 unknown function unknown function 1 42494 42655
ATN92629.1 MF919541_p62 hypothetical protein phrog_301 secreted protein other 1 42844 43176
ATN92652.1 MF919541_p85 polynucleotide kinase phrog_505 polynucleotide kinase other 1 52357 53298
ATN92689.1 MF919541_p122 helix-turn-helix DNA binding domain protein phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 67347 67610
ATN92597.1 MF919541_p30 hypothetical protein phrog_644 unknown function unknown function 1 29065 29493
ATN92651.1 MF919541_p84 hypothetical protein phrog_2894 unknown function unknown function 1 52008 52202
ATN92681.1 MF919541_p114 hypothetical protein phrog_3062 unknown function unknown function 1 65371 65625
ATN92677.1 MF919541_p110 DNA recombinase phrog_97 UvsX-like recombinase other 1 63929 64891
ATN92638.1 MF919541_p71 hypothetical protein phrog_1622 unknown function unknown function 1 47102 47275
ATN92683.1 MF919541_p116 hypothetical protein phrog_2764 unknown function unknown function 1 66032 66199
ATN92698.1 MF919541_p131 hypothetical protein phrog_2883 unknown function unknown function -1 70460 70972
ATN92602.1 MF919541_p35 hypothetical protein phrog_2424 unknown function unknown function 1 32038 32376
ATN92678.1 MF919541_p111 hypothetical protein phrog_2965 unknown function unknown function 1 64888 65025
ATN92579.1 MF919541_p12 capsid maturation protease phrog_2753 head maturation protease head and packaging 1 6745 7839
ATN92661.1 MF919541_p94 hypothetical protein phrog_2788 unknown function unknown function 1 56779 57114
ATN92656.1 MF919541_p89 helix-turn-helix DNA binding domain protein phrog_1590 unknown function unknown function 1 54949 55770
ATN92647.1 MF919541_p80 WhiB family transcription factor phrog_1821 transcriptional regulator WhiB-like transcription regulation 1 50862 51137
ATN92622.1 MF919541_p55 hypothetical protein phrog_2463 unknown function unknown function 1 40862 41008
ATN92694.1 MF919541_p127 hypothetical protein phrog_1587 unknown function unknown function -1 69209 69538
ATN92594.1 MF919541_p27 minor tail protein phrog_346 minor tail protein tail 1 22799 25195
ATN92612.1 MF919541_p45 hypothetical protein phrog_17862 unknown function unknown function -1 35544 35909
ATN92617.1 MF919541_p50 hypothetical protein phrog_950 unknown function unknown function -1 38261 39010
ATN92587.1 MF919541_p21 tail assembly chaperone phrog_621 tail assembly chaperone tail 1 12469 12930
ATN92615.1 MF919541_p48 integrase phrog_1 integrase integration and excision 1 37024 37905
ATN92655.1 MF919541_p88 RNA ligase phrog_968 RNA ligase DNA, RNA and nucleotide metabolism 1 53587 54912
ATN92663.1 MF919541_p96 DNA methylase phrog_1035 endonuclease VII DNA, RNA and nucleotide metabolism 1 57688 58251
ATN92706.1 MF919541_p139 hypothetical protein phrog_8627 unknown function unknown function 1 73171 73584
ATN92577.1 MF919541_p10 hypothetical protein phrog_2845 unknown function unknown function 1 4978 5199
ATN92581.1 MF919541_p14 head-to-tail connector protein phrog_2796 head-tail connector protein connector 1 9487 9678
ATN92618.1 MF919541_p51 immunity repressor phrog_2745 transcriptional repressor transcription regulation -1 39129 39476
ATN92670.1 MF919541_p103 HNH endonuclease phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 60791 61081
ATN92649.1 MF919541_p82 hypothetical protein phrog_9963 unknown function unknown function 1 51326 51652
ATN92703.1 MF919541_p136 hypothetical protein phrog_2795 unknown function unknown function -1 72182 72379
ATN92631.1 MF919541_p64 hypothetical protein phrog_466 exonuclease DNA, RNA and nucleotide metabolism 1 43499 44467
ATN92665.1 MF919541_p98 protease phrog_94 head maturation protease head and packaging 1 58773 59579
ATN92611.1 MF919541_p44 hypothetical protein phrog_2815 unknown function unknown function -1 35366 35512
ATN92593.1 MF919541_p26 minor tail protein phrog_732 minor tail protein tail 1 21949 22782
ATN92679.1 MF919541_p112 hypothetical protein phrog_2755 unknown function unknown function 1 65012 65185
ATN92586.1 MF919541_p19 major tail protein phrog_476 major tail protein tail 1 11378 12349
ATN92642.1 MF919541_p75 hypothetical protein phrog_1673 unknown function unknown function 1 48225 48461
ATN92610.1 MF919541_p43 hypothetical protein phrog_2702 unknown function unknown function -1 35132 35347
ATN92630.1 MF919541_p63 hypothetical protein phrog_762 unknown function unknown function 1 43173 43502