functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
MF959998 |
Definition |
Marinobacter phage PS6, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
58226 |
Host Name |
Marinobacter |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
80 |
%GC |
51.9 |
Number of singletons |
41 |
Number of paralogs |
1 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
ATN93259.1 | MF959998_p21 | hypothetical protein | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 19686 | 20888 |
ATN93267.1 | MF959998_p29 | hypothetical protein | phrog_54 | DksA-like zinc-finger protein | other | 1 | 25799 | 26020 |
ATN93250.1 | MF959998_p12 | head-tail preconnector protein | phrog_53 | head maturation protease | head and packaging | -1 | 9559 | 10851 |
ATN93288.1 | MF959998_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35712 | 35921 |
ATN93253.1 | MF959998_p15 | hypothetical protein | phrog_717 | unknown function | unknown function | -1 | 12672 | 12929 |
ATN93309.1 | MF959998_p71 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46869 | 47339 |
ATN93256.1 | MF959998_p18 | DNA primase/helicase | phrog_1829 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 16250 | 18619 |
ATN93278.1 | MF959998_p40 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31297 | 31524 |
ATN93310.1 | MF959998_p72 | regulator of chromosome condensation | singleton | unknown function | unknown function | -1 | 47367 | 48263 |
ATN93246.1 | MF959998_p8 | hypothetical protein | phrog_4858 | unknown function | unknown function | -1 | 7292 | 7615 |
ATN93312.1 | MF959998_p74 | hypothetical protein | phrog_1101 | tail protein | tail | -1 | 48937 | 53439 |
ATN93244.1 | MF959998_p6 | hypothetical protein | phrog_5078 | tail terminator | connector | -1 | 6176 | 6652 |
ATN93290.1 | MF959998_p52 | hypothetical protein | phrog_17873 | unknown function | unknown function | -1 | 36207 | 36422 |
ATN93284.1 | MF959998_p46 | hypothetical protein | singleton | unknown function | unknown function | 1 | 34480 | 34638 |
ATN93298.1 | MF959998_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39956 | 40489 |
ATN93276.1 | MF959998_p38 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30382 | 30981 |
ATN93273.1 | MF959998_p35 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29216 | 29431 |
ATN93245.1 | MF959998_p7 | hypothetical protein | phrog_27 | tail completion or Neck1 protein | connector | -1 | 6645 | 7295 |
ATN93294.1 | MF959998_p56 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37615 | 37800 |
ATN93274.1 | MF959998_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29397 | 29528 |
ATN93295.1 | MF959998_p57 | DNA ligase | phrog_114 | ATP-dependent DNA ligase | DNA, RNA and nucleotide metabolism | 1 | 37990 | 39360 |
ATN93242.1 | MF959998_p4 | hypothetical protein | phrog_807 | major tail protein with Ig-like domain | tail | -1 | 5186 | 5977 |
ATN93291.1 | MF959998_p53 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36433 | 36756 |
ATN93300.1 | MF959998_p62 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40657 | 40788 |
ATN93287.1 | MF959998_p49 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35520 | 35708 |
ATN93283.1 | MF959998_p45 | shufflon-specific DNA recombinase | phrog_1 | integrase | integration and excision | -1 | 33319 | 34338 |
ATN93264.1 | MF959998_p26 | DNA polymerase | phrog_1252 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 22949 | 25024 |
ATN93293.1 | MF959998_p55 | hypothetical protein | singleton | unknown function | unknown function | -1 | 37130 | 37618 |
ATN93299.1 | MF959998_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40440 | 40628 |
ATN93260.1 | MF959998_p22 | hypothetical protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 20900 | 21580 |
ATN93255.1 | MF959998_p17 | hypothetical protein | phrog_141 | terminase small subunit | head and packaging | -1 | 15070 | 15651 |
ATN93314.1 | MF959998_p76 | hypothetical protein | phrog_1180 | tail assembly chaperone | tail | -1 | 53620 | 53850 |
ATN93292.1 | MF959998_p54 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36756 | 37010 |
ATN93241.1 | MF959998_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4695 | 5156 |
ATN93257.1 | MF959998_p19 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18629 | 18877 |
ATN93318.1 | MF959998_p80 | hypothetical protein | phrog_687 | structural protein | head and packaging | -1 | 57283 | 58161 |
ATN93307.1 | MF959998_p69 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46108 | 46389 |
ATN93243.1 | MF959998_p5 | hypothetical protein | singleton | unknown function | unknown function | -1 | 5995 | 6183 |
ATN93254.1 | MF959998_p16 | terminase large subunit | phrog_15 | terminase large subunit | head and packaging | -1 | 12965 | 15070 |
ATN93315.1 | MF959998_p77 | FAD/FMN-containing dehydrogenase | phrog_778 | tail assembly protein | tail | -1 | 53859 | 54647 |
ATN93252.1 | MF959998_p14 | hypothetical protein | phrog_75 | head-tail adaptor Ad1 | connector | -1 | 12466 | 12672 |
ATN93271.1 | MF959998_p33 | hypothetical protein | phrog_2967 | transcriptional regulator | transcription regulation | 1 | 28311 | 28964 |
ATN93280.1 | MF959998_p42 | hypothetical protein | phrog_20597 | unknown function | unknown function | -1 | 32048 | 32455 |
ATN93269.1 | MF959998_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26503 | 26727 |
ATN93297.1 | MF959998_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39778 | 39999 |
ATN93277.1 | MF959998_p39 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30995 | 31294 |
ATN93249.1 | MF959998_p11 | hypothetical protein | phrog_49 | head decoration | head and packaging | -1 | 9144 | 9518 |
ATN93282.1 | MF959998_p44 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32846 | 32971 |
ATN93281.1 | MF959998_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32497 | 32628 |
ATN93311.1 | MF959998_p73 | hypothetical protein | phrog_21978 | unknown function | unknown function | -1 | 48260 | 48937 |
ATN93304.1 | MF959998_p66 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42447 | 42773 |
ATN93270.1 | MF959998_p32 | DNA helicase | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 26730 | 28097 |
ATN93303.1 | MF959998_p65 | hypothetical protein | singleton | unknown function | unknown function | -1 | 42044 | 42439 |
ATN93301.1 | MF959998_p63 | DNA recombination-dependent growth factor C | phrog_724 | exonuclease recombination-associated | DNA, RNA and nucleotide metabolism | 1 | 40833 | 41786 |
ATN93313.1 | MF959998_p75 | hypothetical protein | phrog_1196 | tail assembly chaperone | tail | -1 | 53432 | 53623 |
ATN93251.1 | MF959998_p13 | portal protein | phrog_21 | portal protein | head and packaging | -1 | 10844 | 12466 |
ATN93265.1 | MF959998_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25021 | 25284 |
ATN93285.1 | MF959998_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 34666 | 35115 |
ATN93286.1 | MF959998_p48 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35105 | 35533 |
ATN93305.1 | MF959998_p67 | hypothetical protein | phrog_30287 | unknown function | unknown function | -1 | 42802 | 45000 |
ATN93239.1 | MF959998_p1 | tape measure protein | phrog_2335 | tail length tape measure protein | tail | -1 | 18 | 4478 |
ATN93258.1 | MF959998_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19002 | 19676 |
ATN93248.1 | MF959998_p10 | major capsid protein | phrog_29 | major head protein | head and packaging | -1 | 8055 | 9104 |
ATN93262.1 | MF959998_p24 | exodeoxyribonuclease VIII | phrog_255 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 21895 | 22488 |
ATN93302.1 | MF959998_p64 | hypothetical protein | singleton | unknown function | unknown function | -1 | 41778 | 42047 |
ATN93306.1 | MF959998_p68 | hypothetical protein | singleton | unknown function | unknown function | -1 | 45000 | 46064 |
ATN93247.1 | MF959998_p9 | hypothetical protein | singleton | unknown function | unknown function | -1 | 7615 | 7986 |
ATN93240.1 | MF959998_p2 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4468 | 4620 |
ATN93317.1 | MF959998_p79 | hypothetical protein | phrog_687 | structural protein | head and packaging | -1 | 56318 | 57283 |
ATN93316.1 | MF959998_p78 | hypothetical protein | phrog_1082 | tail assembly protein | tail | -1 | 54644 | 56314 |
ATN93266.1 | MF959998_p28 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | 1 | 25281 | 25799 |
ATN93268.1 | MF959998_p30 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 26118 | 26477 |
ATN93296.1 | MF959998_p58 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39451 | 39762 |
ATN93308.1 | MF959998_p70 | hypothetical protein | phrog_1501 | unknown function | unknown function | -1 | 46386 | 46856 |
ATN93275.1 | MF959998_p37 | hypothetical protein | singleton | unknown function | unknown function | -1 | 30057 | 30368 |
ATN93263.1 | MF959998_p25 | deoxyuridine 5'-triphosphate nucleotidohydrolase | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 22485 | 22946 |
ATN93289.1 | MF959998_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35921 | 36214 |
ATN93279.1 | MF959998_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31588 | 32037 |
ATN93261.1 | MF959998_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 21755 | 21898 |
ATN93272.1 | MF959998_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 29058 | 29219 |