Genomic map of Pectobacterium phage DU_PP_III (MF979562)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF979562
Definition
Pectobacterium phage DU_PP_III, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae.
DB of origin
NUCCORE
Length
11504
Host Name
Pectobacterium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
7
%GC
37.39
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATS93716.1 MF979562_p7 hypothetical protein singleton unknown function unknown function -1 9835 10146
ATS93712.1 MF979562_p3 hypothetical protein phrog_2038 upper collar connector connector 1 4502 5572
ATS93710.1 MF979562_p1 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 1149 3221
ATS93714.1 MF979562_p5 hypothetical protein singleton unknown function unknown function 1 7440 7877
ATS93713.1 MF979562_p4 hypothetical protein phrog_2006 major head protein head and packaging 1 6152 7375
ATS93715.1 MF979562_p6 Exo-glucosaminidase lytG precursor singleton unknown function unknown function 1 9334 9783
ATS93711.1 MF979562_p2 DNA encapsidation protein singleton unknown function unknown function 1 3218 4309