| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF979562 |
Definition |
Pectobacterium phage DU_PP_III, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; unclassified Podoviridae. |
DB of origin |
NUCCORE |
Length |
11504 |
Host Name |
Pectobacterium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
7 |
%GC |
37.39 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATS93716.1 | MF979562_p7 | hypothetical protein | singleton | unknown function | unknown function | -1 | 9835 | 10146 |
| ATS93712.1 | MF979562_p3 | hypothetical protein | phrog_2038 | upper collar connector | connector | 1 | 4502 | 5572 |
| ATS93710.1 | MF979562_p1 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 1149 | 3221 |
| ATS93714.1 | MF979562_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7440 | 7877 |
| ATS93713.1 | MF979562_p4 | hypothetical protein | phrog_2006 | major head protein | head and packaging | 1 | 6152 | 7375 |
| ATS93715.1 | MF979562_p6 | Exo-glucosaminidase lytG precursor | singleton | unknown function | unknown function | 1 | 9334 | 9783 |
| ATS93711.1 | MF979562_p2 | DNA encapsidation protein | singleton | unknown function | unknown function | 1 | 3218 | 4309 |