Genomic map of Escherichia phage SRT8 (MF996376)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MF996376
Definition
Escherichia phage SRT8, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Tunavirinae; Sertoctavirus; Escherichia virus SRT8.
DB of origin
NUCCORE
Length
49579
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
48.03
Number of singletons
14
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATN93810.1 MF996376_p33 terminase small subunit phrog_606 terminase small subunit head and packaging -1 26901 27440
ATN93860.1 MF996376_p83 hypothetical protein phrog_824 unknown function unknown function -1 46940 47365
ATN93819.1 MF996376_p42 hypothetical protein singleton unknown function unknown function -1 29579 29776
ATN93807.1 MF996376_p30 hypothetical protein phrog_324 head morphogenesis head and packaging -1 23160 23924
ATN93787.1 MF996376_p10 tail fiber protein phrog_31 central tail fiber J tail -1 7440 10865
ATN93854.1 MF996376_p77 hypothetical protein phrog_4596 unknown function unknown function -1 44882 45127
ATN93794.1 MF996376_p17 tape measure chaperone phrog_680 tail length tape measure protein tail -1 16194 16493
ATN93835.1 MF996376_p58 hypothetical protein phrog_6147 unknown function unknown function 1 36699 36989
ATN93796.1 MF996376_p19 major tail protein phrog_584 major tail protein tail -1 16938 17594
ATN93782.1 MF996376_p5 recombination protein phrog_155 Erf-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 3793 4446
ATN93779.1 MF996376_p2 hypothetical protein phrog_510 DNA primase DNA, RNA and nucleotide metabolism 1 437 1381
ATN93816.1 MF996376_p39 hypothetical protein phrog_9709 unknown function unknown function -1 28742 29116
ATN93859.1 MF996376_p82 hypothetical protein singleton unknown function unknown function -1 46568 46879
ATN93808.1 MF996376_p31 portal protein phrog_146 portal protein head and packaging -1 23914 25230
ATN93825.1 MF996376_p48 hypothetical protein phrog_10580 unknown function unknown function -1 32158 32472
ATN93783.1 MF996376_p6 exodeoxyribonuclease VIII phrog_412 exonuclease VIII DNA, RNA and nucleotide metabolism -1 4529 5599
ATN93849.1 MF996376_p72 hypothetical protein phrog_1804 Rz-like spanin lysis -1 42055 42459
ATN93829.1 MF996376_p52 hypothetical protein phrog_24939 unknown function unknown function -1 33300 33635
ATN93778.1 MF996376_p1 hypothetical protein singleton unknown function unknown function 1 144 377
ATN93858.1 MF996376_p81 Dam methylase phrog_111 DNA methyltransferase other -1 45851 46564
ATN93788.1 MF996376_p11 tail assembly protein phrog_32 tail assembly protein tail -1 10943 11545
ATN93793.1 MF996376_p16 TtpM phrog_24 tail length tape measure protein tail -1 13447 16152
ATN93848.1 MF996376_p71 hypothetical protein phrog_30053 unknown function unknown function 1 41795 42043
ATN93821.1 MF996376_p44 polynucleotide kinase/phosphatase phrog_415 polynucleotide kinase other -1 30536 31069
ATN93836.1 MF996376_p59 hypothetical protein singleton unknown function unknown function 1 36986 37129
ATN93795.1 MF996376_p18 tape measure chaperone phrog_569 tail length tape measure protein tail -1 16511 16825
ATN93851.1 MF996376_p74 holin protein phrog_2877 holin lysis -1 42956 43171
ATN93852.1 MF996376_p75 hypothetical protein phrog_4788 unknown function unknown function -1 43294 43470
ATN93838.1 MF996376_p61 hypothetical protein singleton unknown function unknown function 1 37394 37666
ATN93797.1 MF996376_p20 hypothetical protein phrog_179 tail terminator connector -1 17607 18017
ATN93855.1 MF996376_p78 hypothetical protein phrog_2817 unknown function unknown function -1 45099 45371
ATN93837.1 MF996376_p60 hypothetical protein singleton unknown function unknown function 1 37132 37314
ATN93812.1 MF996376_p35 hypothetical protein phrog_2919 unknown function unknown function -1 27744 27893
ATN93790.1 MF996376_p13 minor tail protein phrog_4199 minor tail protein tail -1 12255 12509
ATN93802.1 MF996376_p25 major capsid protein phrog_264 major head protein head and packaging -1 19648 20625
ATN93800.1 MF996376_p23 hypothetical protein phrog_302 virion structural protein head and packaging -1 18817 19230
ATN93785.1 MF996376_p8 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover -1 6410 7081
ATN93815.1 MF996376_p38 hypothetical protein phrog_303 unknown function unknown function -1 28438 28671
ATN93818.1 MF996376_p41 hypothetical protein singleton unknown function unknown function -1 29376 29582
ATN93791.1 MF996376_p14 hypothetical protein phrog_18 minor tail protein tail -1 12568 13008
ATN93840.1 MF996376_p63 hypothetical protein phrog_5016 unknown function unknown function 1 37852 38076
ATN93839.1 MF996376_p62 hypothetical protein phrog_6503 unknown function unknown function 1 37663 37851
ATN93784.1 MF996376_p7 hypothetical protein phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 6115 6375
ATN93828.1 MF996376_p51 hypothetical protein phrog_37078 unknown function unknown function -1 33052 33303
ATN93846.1 MF996376_p69 hypothetical protein phrog_2373 DNA helicase DNA, RNA and nucleotide metabolism 1 39630 41195
ATN93853.1 MF996376_p76 hypothetical protein phrog_704 DNA repair exonuclease DNA, RNA and nucleotide metabolism -1 43663 44796
ATN93824.1 MF996376_p47 hypothetical protein phrog_11330 unknown function unknown function -1 31780 31998
ATN93786.1 MF996376_p9 hypothetical protein phrog_557 outer membrane protein other -1 7084 7389
ATN93831.1 MF996376_p54 hypothetical protein phrog_6006 unknown function unknown function -1 34242 34391
ATN93857.1 MF996376_p80 hypothetical protein phrog_2676 unknown function unknown function -1 45624 45851
ATN93805.1 MF996376_p28 hypothetical protein phrog_1989 unknown function unknown function -1 21560 22036
ATN93789.1 MF996376_p12 hypothetical protein phrog_30 minor tail protein tail -1 11542 12258
ATN93792.1 MF996376_p15 hypothetical protein phrog_14 minor tail protein tail -1 13090 13443
ATN93847.1 MF996376_p70 hypothetical protein phrog_2794 unknown function unknown function 1 41202 41606
ATN93827.1 MF996376_p50 hypothetical protein singleton unknown function unknown function -1 32843 33055
ATN93861.1 MF996376_p84 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 47362 49413
ATN93826.1 MF996376_p49 hypothetical protein phrog_986 RNA-binding protein DNA, RNA and nucleotide metabolism -1 32544 32846
ATN93814.1 MF996376_p37 hypothetical protein phrog_4927 unknown function unknown function -1 28223 28426
ATN93803.1 MF996376_p26 hypothetical protein singleton unknown function unknown function 1 20624 20740
ATN93798.1 MF996376_p21 hypothetical protein phrog_169 tail completion or Neck1 protein connector -1 18007 18450
ATN93850.1 MF996376_p73 endolysin phrog_7 endolysin lysis -1 42456 42953
ATN93856.1 MF996376_p79 hypothetical protein phrog_2180 unknown function unknown function -1 45364 45558
ATN93804.1 MF996376_p27 hypothetical protein phrog_1989 unknown function unknown function -1 20715 21497
ATN93843.1 MF996376_p66 hypothetical protein phrog_4344 unknown function unknown function 1 38621 38845
ATN93830.1 MF996376_p53 hypothetical protein phrog_7116 unknown function unknown function -1 33674 34189
ATN93842.1 MF996376_p65 hypothetical protein singleton unknown function unknown function 1 38396 38551
ATN93832.1 MF996376_p55 hypothetical protein phrog_9595 unknown function unknown function -1 34483 34965
ATN93809.1 MF996376_p32 hypothetical protein phrog_38 terminase large subunit head and packaging -1 25288 26859
ATN93845.1 MF996376_p68 hypothetical protein phrog_2684 unknown function unknown function 1 39141 39554
ATN93801.1 MF996376_p24 hypothetical protein phrog_2716 unknown function unknown function -1 19281 19586
ATN93823.1 MF996376_p46 hypothetical protein phrog_10642 unknown function unknown function -1 31274 31720
ATN93799.1 MF996376_p22 hypothetical protein phrog_161 head closure Hc1 connector -1 18443 18820
ATN93822.1 MF996376_p45 hypothetical protein singleton unknown function unknown function -1 31069 31221
ATN93844.1 MF996376_p67 hypothetical protein phrog_9085 unknown function unknown function 1 38849 39058
ATN93833.1 MF996376_p56 hypothetical protein phrog_19692 unknown function unknown function -1 35037 35318
ATN93841.1 MF996376_p64 hypothetical protein singleton unknown function unknown function 1 38073 38399
ATN93781.1 MF996376_p4 hypothetical protein phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 3336 3746
ATN93834.1 MF996376_p57 hypothetical protein singleton unknown function unknown function -1 35393 35986
ATN93813.1 MF996376_p36 hypothetical protein phrog_6666 unknown function unknown function -1 27898 28059
ATN93820.1 MF996376_p43 hypothetical protein phrog_139 deoxynucleoside monophosphate kinase other -1 29850 30428
ATN93780.1 MF996376_p3 tail fiber protein phrog_5481 tail fiber protein tail 1 1467 3299
ATN93811.1 MF996376_p34 hypothetical protein phrog_5976 unknown function unknown function -1 27511 27741
ATN93806.1 MF996376_p29 major head subunit precursor phrog_530 head maturation protease head and packaging -1 22050 23156
ATN93817.1 MF996376_p40 hypothetical protein singleton unknown function unknown function -1 29113 29337