| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MF996376 |
Definition |
Escherichia phage SRT8, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Drexlerviridae; Tunavirinae; Sertoctavirus; Escherichia virus SRT8. |
DB of origin |
NUCCORE |
Length |
49579 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
84 |
%GC |
48.03 |
Number of singletons |
14 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATN93810.1 | MF996376_p33 | terminase small subunit | phrog_606 | terminase small subunit | head and packaging | -1 | 26901 | 27440 |
| ATN93860.1 | MF996376_p83 | hypothetical protein | phrog_824 | unknown function | unknown function | -1 | 46940 | 47365 |
| ATN93819.1 | MF996376_p42 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29579 | 29776 |
| ATN93807.1 | MF996376_p30 | hypothetical protein | phrog_324 | head morphogenesis | head and packaging | -1 | 23160 | 23924 |
| ATN93787.1 | MF996376_p10 | tail fiber protein | phrog_31 | central tail fiber J | tail | -1 | 7440 | 10865 |
| ATN93854.1 | MF996376_p77 | hypothetical protein | phrog_4596 | unknown function | unknown function | -1 | 44882 | 45127 |
| ATN93794.1 | MF996376_p17 | tape measure chaperone | phrog_680 | tail length tape measure protein | tail | -1 | 16194 | 16493 |
| ATN93835.1 | MF996376_p58 | hypothetical protein | phrog_6147 | unknown function | unknown function | 1 | 36699 | 36989 |
| ATN93796.1 | MF996376_p19 | major tail protein | phrog_584 | major tail protein | tail | -1 | 16938 | 17594 |
| ATN93782.1 | MF996376_p5 | recombination protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 3793 | 4446 |
| ATN93779.1 | MF996376_p2 | hypothetical protein | phrog_510 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 437 | 1381 |
| ATN93816.1 | MF996376_p39 | hypothetical protein | phrog_9709 | unknown function | unknown function | -1 | 28742 | 29116 |
| ATN93859.1 | MF996376_p82 | hypothetical protein | singleton | unknown function | unknown function | -1 | 46568 | 46879 |
| ATN93808.1 | MF996376_p31 | portal protein | phrog_146 | portal protein | head and packaging | -1 | 23914 | 25230 |
| ATN93825.1 | MF996376_p48 | hypothetical protein | phrog_10580 | unknown function | unknown function | -1 | 32158 | 32472 |
| ATN93783.1 | MF996376_p6 | exodeoxyribonuclease VIII | phrog_412 | exonuclease VIII | DNA, RNA and nucleotide metabolism | -1 | 4529 | 5599 |
| ATN93849.1 | MF996376_p72 | hypothetical protein | phrog_1804 | Rz-like spanin | lysis | -1 | 42055 | 42459 |
| ATN93829.1 | MF996376_p52 | hypothetical protein | phrog_24939 | unknown function | unknown function | -1 | 33300 | 33635 |
| ATN93778.1 | MF996376_p1 | hypothetical protein | singleton | unknown function | unknown function | 1 | 144 | 377 |
| ATN93858.1 | MF996376_p81 | Dam methylase | phrog_111 | DNA methyltransferase | other | -1 | 45851 | 46564 |
| ATN93788.1 | MF996376_p11 | tail assembly protein | phrog_32 | tail assembly protein | tail | -1 | 10943 | 11545 |
| ATN93793.1 | MF996376_p16 | TtpM | phrog_24 | tail length tape measure protein | tail | -1 | 13447 | 16152 |
| ATN93848.1 | MF996376_p71 | hypothetical protein | phrog_30053 | unknown function | unknown function | 1 | 41795 | 42043 |
| ATN93821.1 | MF996376_p44 | polynucleotide kinase/phosphatase | phrog_415 | polynucleotide kinase | other | -1 | 30536 | 31069 |
| ATN93836.1 | MF996376_p59 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36986 | 37129 |
| ATN93795.1 | MF996376_p18 | tape measure chaperone | phrog_569 | tail length tape measure protein | tail | -1 | 16511 | 16825 |
| ATN93851.1 | MF996376_p74 | holin protein | phrog_2877 | holin | lysis | -1 | 42956 | 43171 |
| ATN93852.1 | MF996376_p75 | hypothetical protein | phrog_4788 | unknown function | unknown function | -1 | 43294 | 43470 |
| ATN93838.1 | MF996376_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37394 | 37666 |
| ATN93797.1 | MF996376_p20 | hypothetical protein | phrog_179 | tail terminator | connector | -1 | 17607 | 18017 |
| ATN93855.1 | MF996376_p78 | hypothetical protein | phrog_2817 | unknown function | unknown function | -1 | 45099 | 45371 |
| ATN93837.1 | MF996376_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 37132 | 37314 |
| ATN93812.1 | MF996376_p35 | hypothetical protein | phrog_2919 | unknown function | unknown function | -1 | 27744 | 27893 |
| ATN93790.1 | MF996376_p13 | minor tail protein | phrog_4199 | minor tail protein | tail | -1 | 12255 | 12509 |
| ATN93802.1 | MF996376_p25 | major capsid protein | phrog_264 | major head protein | head and packaging | -1 | 19648 | 20625 |
| ATN93800.1 | MF996376_p23 | hypothetical protein | phrog_302 | virion structural protein | head and packaging | -1 | 18817 | 19230 |
| ATN93785.1 | MF996376_p8 | hypothetical protein | phrog_425 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | -1 | 6410 | 7081 |
| ATN93815.1 | MF996376_p38 | hypothetical protein | phrog_303 | unknown function | unknown function | -1 | 28438 | 28671 |
| ATN93818.1 | MF996376_p41 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29376 | 29582 |
| ATN93791.1 | MF996376_p14 | hypothetical protein | phrog_18 | minor tail protein | tail | -1 | 12568 | 13008 |
| ATN93840.1 | MF996376_p63 | hypothetical protein | phrog_5016 | unknown function | unknown function | 1 | 37852 | 38076 |
| ATN93839.1 | MF996376_p62 | hypothetical protein | phrog_6503 | unknown function | unknown function | 1 | 37663 | 37851 |
| ATN93784.1 | MF996376_p7 | hypothetical protein | phrog_1119 | Cor superinfection exclusion protein | moron, auxiliary metabolic gene and host takeover | 1 | 6115 | 6375 |
| ATN93828.1 | MF996376_p51 | hypothetical protein | phrog_37078 | unknown function | unknown function | -1 | 33052 | 33303 |
| ATN93846.1 | MF996376_p69 | hypothetical protein | phrog_2373 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 39630 | 41195 |
| ATN93853.1 | MF996376_p76 | hypothetical protein | phrog_704 | DNA repair exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43663 | 44796 |
| ATN93824.1 | MF996376_p47 | hypothetical protein | phrog_11330 | unknown function | unknown function | -1 | 31780 | 31998 |
| ATN93786.1 | MF996376_p9 | hypothetical protein | phrog_557 | outer membrane protein | other | -1 | 7084 | 7389 |
| ATN93831.1 | MF996376_p54 | hypothetical protein | phrog_6006 | unknown function | unknown function | -1 | 34242 | 34391 |
| ATN93857.1 | MF996376_p80 | hypothetical protein | phrog_2676 | unknown function | unknown function | -1 | 45624 | 45851 |
| ATN93805.1 | MF996376_p28 | hypothetical protein | phrog_1989 | unknown function | unknown function | -1 | 21560 | 22036 |
| ATN93789.1 | MF996376_p12 | hypothetical protein | phrog_30 | minor tail protein | tail | -1 | 11542 | 12258 |
| ATN93792.1 | MF996376_p15 | hypothetical protein | phrog_14 | minor tail protein | tail | -1 | 13090 | 13443 |
| ATN93847.1 | MF996376_p70 | hypothetical protein | phrog_2794 | unknown function | unknown function | 1 | 41202 | 41606 |
| ATN93827.1 | MF996376_p50 | hypothetical protein | singleton | unknown function | unknown function | -1 | 32843 | 33055 |
| ATN93861.1 | MF996376_p84 | ATP-dependent helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 47362 | 49413 |
| ATN93826.1 | MF996376_p49 | hypothetical protein | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism | -1 | 32544 | 32846 |
| ATN93814.1 | MF996376_p37 | hypothetical protein | phrog_4927 | unknown function | unknown function | -1 | 28223 | 28426 |
| ATN93803.1 | MF996376_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20624 | 20740 |
| ATN93798.1 | MF996376_p21 | hypothetical protein | phrog_169 | tail completion or Neck1 protein | connector | -1 | 18007 | 18450 |
| ATN93850.1 | MF996376_p73 | endolysin | phrog_7 | endolysin | lysis | -1 | 42456 | 42953 |
| ATN93856.1 | MF996376_p79 | hypothetical protein | phrog_2180 | unknown function | unknown function | -1 | 45364 | 45558 |
| ATN93804.1 | MF996376_p27 | hypothetical protein | phrog_1989 | unknown function | unknown function | -1 | 20715 | 21497 |
| ATN93843.1 | MF996376_p66 | hypothetical protein | phrog_4344 | unknown function | unknown function | 1 | 38621 | 38845 |
| ATN93830.1 | MF996376_p53 | hypothetical protein | phrog_7116 | unknown function | unknown function | -1 | 33674 | 34189 |
| ATN93842.1 | MF996376_p65 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38396 | 38551 |
| ATN93832.1 | MF996376_p55 | hypothetical protein | phrog_9595 | unknown function | unknown function | -1 | 34483 | 34965 |
| ATN93809.1 | MF996376_p32 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | -1 | 25288 | 26859 |
| ATN93845.1 | MF996376_p68 | hypothetical protein | phrog_2684 | unknown function | unknown function | 1 | 39141 | 39554 |
| ATN93801.1 | MF996376_p24 | hypothetical protein | phrog_2716 | unknown function | unknown function | -1 | 19281 | 19586 |
| ATN93823.1 | MF996376_p46 | hypothetical protein | phrog_10642 | unknown function | unknown function | -1 | 31274 | 31720 |
| ATN93799.1 | MF996376_p22 | hypothetical protein | phrog_161 | head closure Hc1 | connector | -1 | 18443 | 18820 |
| ATN93822.1 | MF996376_p45 | hypothetical protein | singleton | unknown function | unknown function | -1 | 31069 | 31221 |
| ATN93844.1 | MF996376_p67 | hypothetical protein | phrog_9085 | unknown function | unknown function | 1 | 38849 | 39058 |
| ATN93833.1 | MF996376_p56 | hypothetical protein | phrog_19692 | unknown function | unknown function | -1 | 35037 | 35318 |
| ATN93841.1 | MF996376_p64 | hypothetical protein | singleton | unknown function | unknown function | 1 | 38073 | 38399 |
| ATN93781.1 | MF996376_p4 | hypothetical protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 3336 | 3746 |
| ATN93834.1 | MF996376_p57 | hypothetical protein | singleton | unknown function | unknown function | -1 | 35393 | 35986 |
| ATN93813.1 | MF996376_p36 | hypothetical protein | phrog_6666 | unknown function | unknown function | -1 | 27898 | 28059 |
| ATN93820.1 | MF996376_p43 | hypothetical protein | phrog_139 | deoxynucleoside monophosphate kinase | other | -1 | 29850 | 30428 |
| ATN93780.1 | MF996376_p3 | tail fiber protein | phrog_5481 | tail fiber protein | tail | 1 | 1467 | 3299 |
| ATN93811.1 | MF996376_p34 | hypothetical protein | phrog_5976 | unknown function | unknown function | -1 | 27511 | 27741 |
| ATN93806.1 | MF996376_p29 | major head subunit precursor | phrog_530 | head maturation protease | head and packaging | -1 | 22050 | 23156 |
| ATN93817.1 | MF996376_p40 | hypothetical protein | singleton | unknown function | unknown function | -1 | 29113 | 29337 |