| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
MG009575 |
Definition |
Mycobacterium phage Kumao, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae. |
DB of origin |
NUCCORE |
Length |
70373 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
115 |
%GC |
62.07 |
Number of singletons |
32 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| ATN94001.1 | MG009575_p38 | holin | phrog_9801 | unknown function | unknown function | 1 | 33862 | 34203 |
| ATN94064.1 | MG009575_p101 | hypothetical protein | phrog_29826 | unknown function | unknown function | -1 | 62784 | 63074 |
| ATN94067.1 | MG009575_p104 | hypothetical protein | phrog_9830 | unknown function | unknown function | -1 | 63724 | 63897 |
| ATN94074.1 | MG009575_p111 | hypothetical protein | phrog_23219 | unknown function | unknown function | -1 | 66524 | 66793 |
| ATN93980.1 | MG009575_p17 | major capsid protein | phrog_283 | major head protein | head and packaging | 1 | 9206 | 10348 |
| ATN93993.1 | MG009575_p30 | minor tail protein | phrog_346 | minor tail protein | tail | 1 | 23701 | 26268 |
| ATN94002.1 | MG009575_p39 | lysin B | phrog_102 | endolysin | lysis | 1 | 34279 | 35301 |
| ATN94043.1 | MG009575_p80 | DNA binding protein | singleton | unknown function | unknown function | 1 | 53708 | 53860 |
| ATN93976.1 | MG009575_p13 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 4256 | 5845 |
| ATN94077.1 | MG009575_p114 | N-glycosylase | phrog_3842 | unknown function | unknown function | -1 | 67680 | 68291 |
| ATN94013.1 | MG009575_p50 | hypothetical protein | phrog_10000 | unknown function | unknown function | 1 | 40179 | 40529 |
| ATN94066.1 | MG009575_p103 | hypothetical protein | singleton | unknown function | unknown function | -1 | 63482 | 63727 |
| ATN94073.1 | MG009575_p110 | hypothetical protein | phrog_12268 | unknown function | unknown function | -1 | 66087 | 66431 |
| ATN94036.1 | MG009575_p73 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 50178 | 50432 |
| ATN93966.1 | MG009575_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 680 | 853 |
| ATN94037.1 | MG009575_p74 | hypothetical protein | singleton | unknown function | unknown function | 1 | 50420 | 50782 |
| ATN93990.1 | MG009575_p27 | minor tail protein | phrog_106 | minor tail protein | tail | 1 | 20552 | 21469 |
| ATN94035.1 | MG009575_p72 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 49482 | 50174 |
| ATN94005.1 | MG009575_p42 | hypothetical protein | phrog_419 | unknown function | unknown function | -1 | 35854 | 36138 |
| ATN93984.1 | MG009575_p21 | head-to-tail connector protein | phrog_123 | tail terminator | connector | 1 | 11563 | 12060 |
| ATN94058.1 | MG009575_p95 | integrase | phrog_95 | integrase | integration and excision | 1 | 59042 | 60475 |
| ATN93972.1 | MG009575_p9 | hypothetical protein | phrog_14568 | unknown function | unknown function | -1 | 2813 | 3055 |
| ATN94027.1 | MG009575_p64 | hypothetical protein | phrog_10293 | unknown function | unknown function | 1 | 45123 | 45575 |
| ATN93967.1 | MG009575_p4 | DNA binding protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 834 | 1202 |
| ATN94014.1 | MG009575_p51 | hypothetical protein | phrog_10063 | unknown function | unknown function | 1 | 40523 | 40921 |
| ATN93975.1 | MG009575_p12 | terminase small subunit | phrog_1496 | terminase small subunit | head and packaging | 1 | 3923 | 4243 |
| ATN93973.1 | MG009575_p10 | hypothetical protein | singleton | unknown function | unknown function | -1 | 3059 | 3523 |
| ATN94006.1 | MG009575_p43 | hypothetical protein | singleton | unknown function | unknown function | -1 | 36135 | 36206 |
| ATN94018.1 | MG009575_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41981 | 42154 |
| ATN94017.1 | MG009575_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41637 | 41981 |
| ATN93964.1 | MG009575_p1 | hypothetical protein | singleton | unknown function | unknown function | -1 | 109 | 321 |
| ATN94019.1 | MG009575_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42144 | 42431 |
| ATN94003.1 | MG009575_p40 | glutaredoxin | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 35332 | 35592 |
| ATN94016.1 | MG009575_p53 | hypothetical protein | phrog_13394 | unknown function | unknown function | 1 | 41209 | 41640 |
| ATN94070.1 | MG009575_p107 | hypothetical protein | phrog_5855 | unknown function | unknown function | -1 | 65010 | 65513 |
| ATN94042.1 | MG009575_p79 | HNH endonuclease | phrog_17283 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 52795 | 52965 |
| ATN94010.1 | MG009575_p47 | ERF family ssDNA binding protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 37947 | 38612 |
| ATN93999.1 | MG009575_p36 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32117 | 32389 |
| ATN94007.1 | MG009575_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36877 | 37119 |
| ATN93997.1 | MG009575_p34 | membrane protein | phrog_9635 | unknown function | unknown function | 1 | 30773 | 31102 |
| ATN93974.1 | MG009575_p11 | hypothetical protein | phrog_14015 | unknown function | unknown function | 1 | 3625 | 3909 |
| ATN94061.1 | MG009575_p98 | hypothetical protein | singleton | unknown function | unknown function | -1 | 61157 | 61525 |
| ATN94015.1 | MG009575_p52 | hypothetical protein | phrog_13460 | unknown function | unknown function | 1 | 40902 | 41216 |
| ATN94062.1 | MG009575_p99 | hypothetical protein | phrog_2433 | unknown function | unknown function | -1 | 61672 | 62319 |
| ATN93986.1 | MG009575_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13055 | 13537 |
| ATN94012.1 | MG009575_p49 | protease | phrog_94 | head maturation protease | head and packaging | 1 | 39571 | 40182 |
| ATN93992.1 | MG009575_p29 | minor tail protein | phrog_4413 | minor tail protein | tail | 1 | 23245 | 23697 |
| ATN94021.1 | MG009575_p58 | HNH endonuclease | phrog_722 | unknown function | unknown function | 1 | 42552 | 43010 |
| ATN94065.1 | MG009575_p102 | hypothetical protein | phrog_20451 | unknown function | unknown function | -1 | 63071 | 63364 |
| ATN94020.1 | MG009575_p57 | hypothetical protein | singleton | unknown function | unknown function | 1 | 42403 | 42552 |
| ATN94044.1 | MG009575_p81 | hypothetical protein | phrog_2596 | unknown function | unknown function | 1 | 53900 | 54196 |
| ATN94028.1 | MG009575_p65 | DnaB-like dsDNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 45572 | 46837 |
| ATN93983.1 | MG009575_p20 | head-to-tail connector protein | phrog_5210 | neck protein | connector | 1 | 11204 | 11566 |
| ATN94041.1 | MG009575_p78 | hypothetical protein | singleton | unknown function | unknown function | 1 | 52464 | 52682 |
| ATN93996.1 | MG009575_p33 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 30358 | 30762 |
| ATN93987.1 | MG009575_p24 | tail assembly chaperone | phrog_2624 | tail assembly chaperone | tail | 1 | 13644 | 14485 |
| ATN94069.1 | MG009575_p106 | hypothetical protein | phrog_586 | unknown function | unknown function | -1 | 64531 | 64881 |
| ATN94048.1 | MG009575_p85 | hypothetical protein | singleton | unknown function | unknown function | 1 | 55004 | 55246 |
| ATN94060.1 | MG009575_p97 | hypothetical protein | singleton | unknown function | unknown function | -1 | 60951 | 61160 |
| ATN93978.1 | MG009575_p15 | capsid maturation protease | phrog_193 | head maturation protease | head and packaging | 1 | 7305 | 8408 |
| ATN94030.1 | MG009575_p67 | RusA-like resolvase | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 47222 | 47653 |
| ATN94063.1 | MG009575_p100 | hypothetical protein | phrog_15221 | unknown function | unknown function | -1 | 62654 | 62800 |
| ATN93965.1 | MG009575_p2 | hypothetical protein | phrog_3777 | unknown function | unknown function | -1 | 321 | 683 |
| ATN94023.1 | MG009575_p60 | hypothetical protein | phrog_2021 | unknown function | unknown function | 1 | 43284 | 43625 |
| ATN93998.1 | MG009575_p35 | minor tail protein | phrog_3856 | minor tail protein | tail | 1 | 31130 | 32101 |
| ATN93995.1 | MG009575_p32 | minor tail protein | phrog_13352 | minor tail protein | tail | 1 | 28241 | 30346 |
| ATN94078.1 | MG009575_p115 | hypothetical protein | phrog_17808 | unknown function | unknown function | -1 | 68384 | 68785 |
| ATN93968.1 | MG009575_p5 | hypothetical protein | phrog_658 | unknown function | unknown function | -1 | 1208 | 1540 |
| ATN94024.1 | MG009575_p61 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 43622 | 44035 |
| ATN94033.1 | MG009575_p70 | 5' nucleotidase | phrog_420 | unknown function | unknown function | 1 | 48601 | 49152 |
| ATN94046.1 | MG009575_p83 | dprA-like single stranded DNA binding protein | phrog_289 | GTP-binding domain | other | 1 | 54374 | 54781 |
| ATN94072.1 | MG009575_p109 | hypothetical protein | singleton | unknown function | unknown function | -1 | 65860 | 66018 |
| ATN93981.1 | MG009575_p18 | head-to-tail connector protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 10373 | 10849 |
| ATN93989.1 | MG009575_p26 | tape measure protein | phrog_3547 | tail length tape measure protein | tail | 1 | 14486 | 20476 |
| ATN94040.1 | MG009575_p77 | HNH endonuclease | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 51889 | 52464 |
| ATN93971.1 | MG009575_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 2575 | 2835 |
| ATN93970.1 | MG009575_p7 | thymidylate synthase | phrog_85 | thymidylate synthase | DNA, RNA and nucleotide metabolism | -1 | 1870 | 2568 |
| ATN94047.1 | MG009575_p84 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54778 | 55017 |
| ATN94039.1 | MG009575_p76 | hypothetical protein | singleton | unknown function | unknown function | 1 | 51623 | 51856 |
| ATN94026.1 | MG009575_p63 | ssDNA binding protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 44478 | 44960 |
| ATN94051.1 | MG009575_p88 | hypothetical protein | phrog_3369 | unknown function | unknown function | 1 | 56501 | 56665 |
| ATN93985.1 | MG009575_p22 | major tail protein | phrog_476 | major tail protein | tail | 1 | 12078 | 12980 |
| ATN94068.1 | MG009575_p105 | hypothetical protein | singleton | unknown function | unknown function | -1 | 63993 | 64433 |
| ATN93994.1 | MG009575_p31 | D-Ala-D-Ala carboxypeptidase | phrog_382 | minor tail protein with lysin activity | tail | 1 | 26268 | 28241 |
| ATN94011.1 | MG009575_p48 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 38609 | 39574 |
| ATN93977.1 | MG009575_p14 | portal protein | phrog_104 | portal protein | head and packaging | 1 | 5842 | 7305 |
| ATN94055.1 | MG009575_p92 | hypothetical protein | singleton | unknown function | unknown function | 1 | 57608 | 58093 |
| ATN94076.1 | MG009575_p113 | hypothetical protein | phrog_519 | unknown function | unknown function | -1 | 67422 | 67592 |
| ATN94038.1 | MG009575_p75 | DNA polymerase III subunit | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 50820 | 51623 |
| ATN93979.1 | MG009575_p16 | scaffolding protein | phrog_3760 | head scaffolding protein | head and packaging | 1 | 8489 | 9151 |
| ATN94004.1 | MG009575_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35605 | 35805 |
| ATN94054.1 | MG009575_p91 | hypothetical protein | phrog_1498 | unknown function | unknown function | 1 | 57451 | 57603 |
| ATN94008.1 | MG009575_p45 | hypothetical protein | phrog_11487 | unknown function | unknown function | 1 | 37151 | 37564 |
| ATN94050.1 | MG009575_p87 | DNA recombinase | phrog_97 | UvsX-like recombinase | other | 1 | 55518 | 56504 |
| ATN94022.1 | MG009575_p59 | hypothetical protein | phrog_647 | unknown function | unknown function | 1 | 43007 | 43291 |
| ATN94057.1 | MG009575_p94 | phosphoesterase | phrog_547 | phosphoesterase | other | 1 | 58263 | 58925 |
| ATN94032.1 | MG009575_p69 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48194 | 48430 |
| ATN94029.1 | MG009575_p66 | WhiB family transcription factor | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 46834 | 47148 |
| ATN93982.1 | MG009575_p19 | head-to-tail connector protein | phrog_10309 | head-tail connector protein | connector | 1 | 10846 | 11211 |
| ATN94025.1 | MG009575_p62 | HNH endonuclease | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 44058 | 44420 |
| ATN94009.1 | MG009575_p46 | membrane protein | phrog_1374 | unknown function | unknown function | 1 | 37602 | 37892 |
| ATN94053.1 | MG009575_p90 | nucleotide pyrophosphohydrolase | phrog_671 | nucleotide pyrophosphohydrolase | other | 1 | 57065 | 57454 |
| ATN93988.1 | MG009575_p25 | tail assembly chaperone | phrog_4464 | tail assembly chaperone | tail | 1 | 13644 | 13994 |
| ATN94052.1 | MG009575_p89 | hypothetical protein | singleton | unknown function | unknown function | 1 | 56662 | 57039 |
| ATN94031.1 | MG009575_p68 | WhiB family transcription factor | phrog_10071 | transcriptional regulator WhiB-like | transcription regulation | 1 | 47619 | 48197 |
| ATN94000.1 | MG009575_p37 | lysin A | phrog_700 | endolysin | lysis | 1 | 32402 | 33853 |
| ATN94045.1 | MG009575_p82 | hypothetical protein | singleton | unknown function | unknown function | 1 | 54193 | 54372 |
| ATN94059.1 | MG009575_p96 | membrane protein | phrog_1584 | unknown function | unknown function | -1 | 60667 | 60954 |
| ATN94056.1 | MG009575_p93 | hypothetical protein | singleton | unknown function | unknown function | 1 | 58096 | 58266 |
| ATN93969.1 | MG009575_p6 | hypothetical protein | phrog_15787 | unknown function | unknown function | -1 | 1565 | 1873 |
| ATN94071.1 | MG009575_p108 | hypothetical protein | singleton | unknown function | unknown function | -1 | 65606 | 65770 |
| ATN93991.1 | MG009575_p28 | minor tail protein | phrog_110 | minor tail protein | tail | 1 | 21466 | 23190 |
| ATN94034.1 | MG009575_p71 | hypothetical protein | singleton | unknown function | unknown function | 1 | 49153 | 49401 |
| ATN94049.1 | MG009575_p86 | HNH endonuclease | phrog_960 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 55246 | 55530 |
| ATN94075.1 | MG009575_p112 | hypothetical protein | singleton | unknown function | unknown function | -1 | 67152 | 67322 |