Genomic map of Stenotrophomonas phage DLP4 (MG018224)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
MG018224
Definition
Stenotrophomonas phage DLP4, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Pamexvirus; unclassified Pamexvirus.
DB of origin
NUCCORE
Length
63945
Host Name
Stenotrophomonas maltophilia
Host domain
Bacteria
Is prophage?
undef
Number of proteins
82
%GC
65.05
Number of singletons
10
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
ATS92194.1 MG018224_p2 virion structural protein phrog_1082 tail assembly protein tail 1 1117 2799
ATS92241.1 MG018224_p67 hypothetical protein phrog_21393 unknown function unknown function -1 52903 53280
ATS92200.1 MG018224_p82 tail fiber protein phrog_687 structural protein head and packaging 1 62490 63944
ATS92228.1 MG018224_p13 i-spanin phrog_739 Rz-like spanin lysis 1 10350 10826
ATS92252.1 MG018224_p80 hypothetical protein phrog_4966 unknown function unknown function 1 59768 60013
ATS92190.1 MG018224_p81 tail tape measure protein phrog_1538 tail length tape measure protein tail 1 60117 62474
ATS92264.1 MG018224_p5 hypothetical protein phrog_1196 tail assembly chaperone tail 1 3854 4057
ATS92222.1 MG018224_p20 hypothetical protein phrog_16873 unknown function unknown function -1 12491 13048
ATS92213.1 MG018224_p64 virion structural protein phrog_206 head scaffolding protein head and packaging 1 50549 51334
ATS92256.1 MG018224_p72 hypothetical protein phrog_30814 unknown function unknown function 1 55657 55890
ATS92234.1 MG018224_p79 hypothetical protein phrog_313 Tail assembly chaperone tail 1 59283 59729
ATS92205.1 MG018224_p9 tail assembly protein phrog_9600 tail assembly protein tail 1 7316 8260
ATS92226.1 MG018224_p24 dihydrofolate reductase phrog_13578 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 14817 15305
ATS92237.1 MG018224_p77 tail terminator protein phrog_179 tail terminator connector 1 57892 58314
ATS92263.1 MG018224_p69 hypothetical protein phrog_11770 unknown function unknown function -1 53636 53848
ATS92216.1 MG018224_p27 nucleotide pyrophosphohydrolase phrog_18404 hydrolase other -1 16704 17477
ATS92199.1 MG018224_p52 TerL phrog_2 terminase large subunit head and packaging 1 35045 36514
ATS92224.1 MG018224_p74 virion structural protein phrog_477 head-tail adaptor Ad1 connector 1 56591 57115
ATS92202.1 MG018224_p1 virion structural protein phrog_687 structural protein head and packaging 1 5 1135
ATS92247.1 MG018224_p19 HIRAN domain-containing protein phrog_18569 unknown function unknown function -1 12186 12491
ATS92231.1 MG018224_p51 RNA pseudouridine synthase phrog_28587 unknown function unknown function 1 34581 35045
ATS92212.1 MG018224_p59 PseT phrog_505 polynucleotide kinase other 1 43271 44059
ATS92219.1 MG018224_p46 TerS phrog_4044 terminase small subunit head and packaging 1 33021 33638
ATS92215.1 MG018224_p40 hypothetical protein phrog_17547 unknown function unknown function -1 26538 27317
ATS92223.1 MG018224_p43 hypothetical protein phrog_18196 unknown function unknown function -1 29178 29702
ATS92265.1 MG018224_p37 hypothetical protein phrog_7860 unknown function unknown function -1 25248 25448
ATS92221.1 MG018224_p73 hypothetical protein phrog_6213 unknown function unknown function 1 55957 56568
ATS92229.1 MG018224_p25 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 15290 15766
ATS92195.1 MG018224_p57 hypothetical protein phrog_1735 unknown function unknown function 1 41131 42771
ATS92201.1 MG018224_p10 tail fiber protein singleton unknown function unknown function 1 8263 9546
ATS92197.1 MG018224_p31 helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 19526 21004
ATS92239.1 MG018224_p76 virion structural protein phrog_169 tail completion or Neck1 protein connector 1 57487 57879
ATS92196.1 MG018224_p61 portal protein phrog_145 portal protein head and packaging 1 45042 46562
ATS92227.1 MG018224_p65 YbiA phrog_1017 unknown function unknown function -1 51384 51869
ATS92188.1 MG018224_p62 minor head protein phrog_21789 virion structural protein head and packaging 1 46562 50131
ATS92198.1 MG018224_p41 Cas4 nuclease superfamily protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 27390 28868
ATS92232.1 MG018224_p23 hypothetical protein phrog_2165 DNA helicase DNA, RNA and nucleotide metabolism -1 14386 14832
ATS92230.1 MG018224_p30 hypothetical protein phrog_17205 unknown function unknown function -1 18920 19384
ATS92250.1 MG018224_p63 hypothetical protein phrog_20070 unknown function unknown function 1 50133 50405
ATS92192.1 MG018224_p6 virion structural protein phrog_1101 tail protein tail 1 4044 6359
ATS92235.1 MG018224_p54 hypothetical protein singleton unknown function unknown function 1 37557 37991
ATS92193.1 MG018224_p55 NrdA phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism 1 38200 40020
ATS92254.1 MG018224_p70 hypothetical protein singleton unknown function unknown function -1 53856 54095
ATS92217.1 MG018224_p36 hypothetical protein phrog_421 unknown function unknown function -1 24575 25258
ATS92220.1 MG018224_p39 DNA binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 25793 26404
ATS92246.1 MG018224_p11 hypothetical protein phrog_14936 unknown function unknown function 1 9543 9848
ATS92255.1 MG018224_p4 virion structural protein phrog_1180 tail assembly chaperone tail 1 3624 3857
ATS92261.1 MG018224_p47 hypothetical protein singleton unknown function unknown function 1 33701 33919
ATS92268.1 MG018224_p44 hypothetical protein phrog_19009 unknown function unknown function 1 29904 30074
ATS92209.1 MG018224_p66 hypothetical protein phrog_18209 unknown function unknown function -1 51909 52817
ATS92233.1 MG018224_p33 hypothetical protein phrog_1934 unknown function unknown function -1 23405 23851
ATS92240.1 MG018224_p34 hypothetical protein phrog_18147 unknown function unknown function -1 23848 24237
ATS92267.1 MG018224_p16 hypothetical protein phrog_27196 unknown function unknown function -1 11417 11593
ATS92206.1 MG018224_p26 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 15766 16707
ATS92210.1 MG018224_p60 DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 44059 44955
ATS92242.1 MG018224_p14 o-spanin phrog_812 Rz-like spanin lysis 1 10639 11013
ATS92211.1 MG018224_p3 FAD/FMN-containing dehydrogenase phrog_778 tail assembly protein tail 1 2799 3611
ATS92244.1 MG018224_p35 hypothetical protein phrog_18640 unknown function unknown function -1 24234 24578
ATS92191.1 MG018224_p45 primase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 30071 32392
ATS92259.1 MG018224_p38 hypothetical protein singleton unknown function unknown function -1 25445 25672
ATS92218.1 MG018224_p21 hypothetical protein phrog_17767 unknown function unknown function -1 13171 13839
ATS92269.1 MG018224_p8 tail assembly protein singleton unknown function unknown function 1 7142 7306
ATS92260.1 MG018224_p22 hypothetical protein phrog_35736 unknown function unknown function -1 14040 14264
ATS92251.1 MG018224_p42 hypothetical protein phrog_17764 unknown function unknown function -1 28918 29181
ATS92245.1 MG018224_p68 hypothetical protein singleton unknown function unknown function -1 53292 53621
ATS92262.1 MG018224_p50 hypothetical protein singleton unknown function unknown function 1 34359 34577
ATS92225.1 MG018224_p12 endolysin phrog_465 endolysin lysis 1 9845 10339
ATS92189.1 MG018224_p32 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 21001 23376
ATS92243.1 MG018224_p75 virion structural protein phrog_161 head closure Hc1 connector 1 57117 57485
ATS92249.1 MG018224_p15 membrane protein phrog_6420 unknown function unknown function 1 11010 11285
ATS92236.1 MG018224_p58 hypothetical protein singleton unknown function unknown function 1 42840 43274
ATS92204.1 MG018224_p56 NrdB phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism 1 40028 41020
ATS92266.1 MG018224_p49 hypothetical protein singleton unknown function unknown function 1 34168 34362
ATS92248.1 MG018224_p18 hypothetical protein phrog_17853 unknown function unknown function -1 11918 12202
ATS92203.1 MG018224_p29 hypothetical protein phrog_11422 unknown function unknown function -1 17786 18805
ATS92207.1 MG018224_p78 major tail structural protein phrog_290 minor tail protein tail 1 58337 59278
ATS92208.1 MG018224_p71 major head protein phrog_212 major head protein head and packaging 1 54657 55589
ATS92238.1 MG018224_p53 hypothetical protein phrog_23866 unknown function unknown function 1 37156 37560
ATS92257.1 MG018224_p17 hypothetical protein phrog_8293 unknown function unknown function -1 11661 11891
ATS92214.1 MG018224_p7 tail assembly protein phrog_19976 tail assembly protein tail 1 6359 7138
ATS92253.1 MG018224_p48 hypothetical protein phrog_54 DksA-like zinc-finger protein other 1 33929 34171
ATS92258.1 MG018224_p28 hypothetical protein phrog_34935 unknown function unknown function -1 17553 17783